Detailed information    

insolico Bioinformatically predicted

Overview


Name   comZ   Type   Regulator
Locus tag   Q2U85_RS06490 Genome accession   NZ_CP130335
Coordinates   1231876..1232052 (+) Length   58 a.a.
NCBI ID   WP_001986215.1    Uniprot ID   A0A9W5QJV7
Organism   Bacillus cereus strain DW444     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Related MGE


Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type MGE coordinates Gene coordinates Relative position Distance (bp)
IScluster/Tn 1233034..1234478 1231876..1232052 flank 982


Gene organization within MGE regions


Location: 1231876..1234478
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q2U85_RS06490 (Q2U85_06490) comZ 1231876..1232052 (+) 177 WP_001986215.1 ComZ family protein Regulator
  Q2U85_RS06495 (Q2U85_06495) - 1233046..1234478 (+) 1433 Protein_1185 IS4 family transposase -

Sequence


Protein


Download         Length: 58 a.a.        Molecular weight: 6576.74 Da        Isoelectric Point: 4.4797

>NTDB_id=857985 Q2U85_RS06490 WP_001986215.1 1231876..1232052(+) (comZ) [Bacillus cereus strain DW444]
MNEKSMQFLQIAMKHLPEAKAILDDNGIALDMEKAQPVLELLMKVMNEAYELGKADKE

Nucleotide


Download         Length: 177 bp        

>NTDB_id=857985 Q2U85_RS06490 WP_001986215.1 1231876..1232052(+) (comZ) [Bacillus cereus strain DW444]
ATGAACGAAAAAAGCATGCAGTTTTTACAAATCGCAATGAAGCATTTACCGGAAGCAAAGGCAATTTTAGATGATAATGG
AATTGCACTTGATATGGAGAAGGCACAGCCGGTGTTAGAGTTGTTAATGAAAGTTATGAACGAAGCTTATGAGCTTGGGA
AAGCTGATAAAGAATAA

Domains


Predicted by InterproScan.

(3-57)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

61.818

94.828

0.586