Detailed information
Bioinformatically predicted
Overview
| Name | comGC/cglC | Type | Machinery gene |
| Locus tag | STYK_RS01055 | Genome accession | NZ_AP024523 |
| Coordinates | 211327..211653 (+) | Length | 108 a.a. |
| NCBI ID | WP_004257466.1 | Uniprot ID | A0A3B0BF74 |
| Organism | Streptococcus toyakuensis strain TP1632 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 206327..216653
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| STYK_RS01030 (STYK_01820) | nagA | 206456..207607 (+) | 1152 | WP_001134549.1 | N-acetylglucosamine-6-phosphate deacetylase | - |
| STYK_RS01035 (STYK_01830) | - | 207770..208828 (+) | 1059 | WP_261805079.1 | zinc-dependent alcohol dehydrogenase family protein | - |
| STYK_RS01040 (STYK_01840) | - | 208978..209343 (+) | 366 | WP_000286405.1 | DUF1033 family protein | - |
| STYK_RS01045 (STYK_01850) | comGA/cglA/cilD | 209420..210361 (+) | 942 | WP_261805080.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| STYK_RS01050 (STYK_01860) | comGB/cglB | 210309..211325 (+) | 1017 | WP_261805081.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| STYK_RS01055 (STYK_01870) | comGC/cglC | 211327..211653 (+) | 327 | WP_004257466.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| STYK_RS01060 (STYK_01880) | comGD/cglD | 211646..212050 (+) | 405 | WP_261081317.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| STYK_RS01065 (STYK_01890) | comGE/cglE | 212013..212315 (+) | 303 | WP_000413380.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| STYK_RS01070 (STYK_01900) | comGF/cglF | 212278..212739 (+) | 462 | WP_261805082.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| STYK_RS01075 (STYK_01910) | comGG/cglG | 212717..213130 (+) | 414 | WP_261805083.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| STYK_RS01080 (STYK_01920) | - | 213163..213750 (+) | 588 | WP_261805084.1 | class I SAM-dependent methyltransferase | - |
| STYK_RS01085 (STYK_01930) | comYH | 213811..214764 (+) | 954 | WP_049515760.1 | class I SAM-dependent methyltransferase | Machinery gene |
| STYK_RS01090 (STYK_01940) | - | 214815..216005 (+) | 1191 | WP_033684718.1 | acetate kinase | - |
| STYK_RS01095 (STYK_01950) | rnpA | 216155..216526 (+) | 372 | WP_033679593.1 | ribonuclease P protein component | - |
Sequence
Protein
Download Length: 108 a.a. Molecular weight: 12125.26 Da Isoelectric Point: 10.0055
>NTDB_id=85711 STYK_RS01055 WP_004257466.1 211327..211653(+) (comGC/cglC) [Streptococcus toyakuensis strain TP1632]
MKKMMTFLKKAKVKAFTLVEMLVVLLIISVLLLLFVPNLTKQKEAVNDKGKAAVVKVVESQAELYSLDKNEEASLSKLQA
DGRITEEQAKAYNEYYTKNGGKNRTVND
MKKMMTFLKKAKVKAFTLVEMLVVLLIISVLLLLFVPNLTKQKEAVNDKGKAAVVKVVESQAELYSLDKNEEASLSKLQA
DGRITEEQAKAYNEYYTKNGGKNRTVND
Nucleotide
Download Length: 327 bp
>NTDB_id=85711 STYK_RS01055 WP_004257466.1 211327..211653(+) (comGC/cglC) [Streptococcus toyakuensis strain TP1632]
ATGAAAAAAATGATGACATTCTTGAAAAAAGCGAAAGTGAAGGCTTTCACACTTGTGGAGATGTTGGTGGTCTTGCTGAT
TATCAGCGTACTTCTCTTGCTATTTGTGCCTAATTTGACCAAGCAAAAAGAAGCAGTTAACGACAAAGGAAAAGCAGCTG
TTGTGAAGGTGGTAGAAAGCCAGGCAGAGCTTTATAGCTTAGATAAAAATGAAGAGGCTAGCCTAAGCAAGTTACAAGCA
GATGGGCGAATCACAGAAGAGCAGGCTAAAGCCTATAATGAATACTATACAAAAAATGGAGGAAAAAATCGTACAGTCAA
TGATTAA
ATGAAAAAAATGATGACATTCTTGAAAAAAGCGAAAGTGAAGGCTTTCACACTTGTGGAGATGTTGGTGGTCTTGCTGAT
TATCAGCGTACTTCTCTTGCTATTTGTGCCTAATTTGACCAAGCAAAAAGAAGCAGTTAACGACAAAGGAAAAGCAGCTG
TTGTGAAGGTGGTAGAAAGCCAGGCAGAGCTTTATAGCTTAGATAAAAATGAAGAGGCTAGCCTAAGCAAGTTACAAGCA
GATGGGCGAATCACAGAAGAGCAGGCTAAAGCCTATAATGAATACTATACAAAAAATGGAGGAAAAAATCGTACAGTCAA
TGATTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGC/cglC | Streptococcus mitis SK321 |
96.296 |
100 |
0.963 |
| comGC/cglC | Streptococcus pneumoniae Rx1 |
91.667 |
100 |
0.917 |
| comGC/cglC | Streptococcus pneumoniae D39 |
91.667 |
100 |
0.917 |
| comGC/cglC | Streptococcus pneumoniae R6 |
91.667 |
100 |
0.917 |
| comGC/cglC | Streptococcus pneumoniae TIGR4 |
91.667 |
100 |
0.917 |
| comGC/cglC | Streptococcus mitis NCTC 12261 |
89.815 |
100 |
0.898 |
| comYC | Streptococcus gordonii str. Challis substr. CH1 |
67.961 |
95.37 |
0.648 |
| comYC | Streptococcus mutans UA140 |
65.686 |
94.444 |
0.62 |
| comYC | Streptococcus mutans UA159 |
65.686 |
94.444 |
0.62 |
| comYC | Streptococcus suis isolate S10 |
71.605 |
75 |
0.537 |
| comGC | Lactococcus lactis subsp. cremoris KW2 |
55.882 |
94.444 |
0.528 |
| comGC | Staphylococcus aureus MW2 |
51.163 |
79.63 |
0.407 |
| comGC | Staphylococcus aureus N315 |
51.163 |
79.63 |
0.407 |