Detailed information NTG0085712

Bioinformatically predicted

Overview

• Name: comGD/cglD
• Type: Machinery gene
• Locus tag: STYK_RS01060
• Genome accession: NZ_AP024523
• Coordinates: 211646..212050 (+)
• Length: 134 a.a.
• NCBI ID: WP_261081317.1
• Uniprot ID: -
• Organism: Streptococcus toyakuensis strain TP1632
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 206646..217050

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
STYK_RS01035 (STYK_01830)	-	207770..208828 (+)	1059	WP_261805079.1	zinc-dependent alcohol dehydrogenase family protein	-
STYK_RS01040 (STYK_01840)	-	208978..209343 (+)	366	WP_000286405.1	DUF1033 family protein	-
STYK_RS01045 (STYK_01850)	comGA/cglA/cilD	209420..210361 (+)	942	WP_261805080.1	competence type IV pilus ATPase ComGA	Machinery gene
STYK_RS01050 (STYK_01860)	comGB/cglB	210309..211325 (+)	1017	WP_261805081.1	competence type IV pilus assembly protein ComGB	Machinery gene
STYK_RS01055 (STYK_01870)	comGC/cglC	211327..211653 (+)	327	WP_004257466.1	competence type IV pilus major pilin ComGC	Machinery gene
STYK_RS01060 (STYK_01880)	comGD/cglD	211646..212050 (+)	405	WP_261081317.1	competence type IV pilus minor pilin ComGD	Machinery gene
STYK_RS01065 (STYK_01890)	comGE/cglE	212013..212315 (+)	303	WP_000413380.1	competence type IV pilus minor pilin ComGE	Machinery gene
STYK_RS01070 (STYK_01900)	comGF/cglF	212278..212739 (+)	462	WP_261805082.1	competence type IV pilus minor pilin ComGF	Machinery gene
STYK_RS01075 (STYK_01910)	comGG/cglG	212717..213130 (+)	414	WP_261805083.1	competence type IV pilus minor pilin ComGG	Machinery gene
STYK_RS01080 (STYK_01920)	-	213163..213750 (+)	588	WP_261805084.1	class I SAM-dependent methyltransferase	-
STYK_RS01085 (STYK_01930)	comYH	213811..214764 (+)	954	WP_049515760.1	class I SAM-dependent methyltransferase	Machinery gene
STYK_RS01090 (STYK_01940)	-	214815..216005 (+)	1191	WP_033684718.1	acetate kinase	-
STYK_RS01095 (STYK_01950)	rnpA	216155..216526 (+)	372	WP_033679593.1	ribonuclease P protein component	-

Sequence

Protein

• Length: 134 a.a.
• Molecular weight: 14680.96 Da
• Isoelectric Point: 10.2164

>NTDB_id=85712 STYK_RS01060 WP_261081317.1 211646..212050(+) (comGD/cglD) [Streptococcus toyakuensis strain TP1632]
MIKAFTMLESLLVLGLVSILALGLSGSVQSTFAAVEEQIFFMEFEELYRETQKRSVASQQKTSLNLDGQMISNGSQKLTV
PKGIQAPSGQSIIFDRAGGNSSLAKVEFQTGKGTIRYQLYLGNGKIKRIKETKN

Nucleotide

• Length: 405 bp

>NTDB_id=85712 STYK_RS01060 WP_261081317.1 211646..212050(+) (comGD/cglD) [Streptococcus toyakuensis strain TP1632]
ATGATTAAGGCTTTTACCATGCTGGAAAGTCTCTTAGTTTTGGGACTTGTGAGTATCCTTGCCTTGGGCTTATCCGGCTC
TGTCCAATCCACTTTTGCGGCGGTAGAGGAGCAGATTTTCTTTATGGAGTTTGAAGAACTTTATAGGGAAACCCAAAAAC
GTAGTGTAGCCAGTCAGCAAAAGACTAGTCTAAACTTAGATGGGCAGATGATCAGTAACGGCAGTCAAAAGTTGACAGTT
CCTAAAGGAATTCAAGCACCATCGGGACAAAGTATCATATTTGACCGAGCTGGGGGCAATTCGTCCCTGGCTAAGGTTGA
ATTTCAGACCGGTAAAGGAACGATTCGCTATCAATTATATCTAGGAAATGGAAAAATTAAACGCATTAAGGAAACAAAAA
ATTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD/cglD	Streptococcus mitis SK321	97.761	100	0.978
comGD/cglD	Streptococcus pneumoniae Rx1	97.015	100	0.97
comGD/cglD	Streptococcus pneumoniae D39	97.015	100	0.97
comGD/cglD	Streptococcus pneumoniae R6	97.015	100	0.97
comGD/cglD	Streptococcus mitis NCTC 12261	95.489	99.254	0.948
comGD/cglD	Streptococcus pneumoniae TIGR4	94.776	100	0.948
comYD	Streptococcus gordonii str. Challis substr. CH1	59.055	94.776	0.56
comYD	Streptococcus mutans UA140	49.219	95.522	0.47
comYD	Streptococcus mutans UA159	49.219	95.522	0.47
comGD	Lactococcus lactis subsp. cremoris KW2	36.842	99.254	0.366