Detailed information NTG0085714

Bioinformatically predicted

Overview

• Name: comGF/cglF
• Type: Machinery gene
• Locus tag: STYK_RS01070
• Genome accession: NZ_AP024523
• Coordinates: 212278..212739 (+)
• Length: 153 a.a.
• NCBI ID: WP_261805082.1
• Uniprot ID: -
• Organism: Streptococcus toyakuensis strain TP1632
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 207278..217739

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
STYK_RS01035 (STYK_01830)	-	207770..208828 (+)	1059	WP_261805079.1	zinc-dependent alcohol dehydrogenase family protein	-
STYK_RS01040 (STYK_01840)	-	208978..209343 (+)	366	WP_000286405.1	DUF1033 family protein	-
STYK_RS01045 (STYK_01850)	comGA/cglA/cilD	209420..210361 (+)	942	WP_261805080.1	competence type IV pilus ATPase ComGA	Machinery gene
STYK_RS01050 (STYK_01860)	comGB/cglB	210309..211325 (+)	1017	WP_261805081.1	competence type IV pilus assembly protein ComGB	Machinery gene
STYK_RS01055 (STYK_01870)	comGC/cglC	211327..211653 (+)	327	WP_004257466.1	competence type IV pilus major pilin ComGC	Machinery gene
STYK_RS01060 (STYK_01880)	comGD/cglD	211646..212050 (+)	405	WP_261081317.1	competence type IV pilus minor pilin ComGD	Machinery gene
STYK_RS01065 (STYK_01890)	comGE/cglE	212013..212315 (+)	303	WP_000413380.1	competence type IV pilus minor pilin ComGE	Machinery gene
STYK_RS01070 (STYK_01900)	comGF/cglF	212278..212739 (+)	462	WP_261805082.1	competence type IV pilus minor pilin ComGF	Machinery gene
STYK_RS01075 (STYK_01910)	comGG/cglG	212717..213130 (+)	414	WP_261805083.1	competence type IV pilus minor pilin ComGG	Machinery gene
STYK_RS01080 (STYK_01920)	-	213163..213750 (+)	588	WP_261805084.1	class I SAM-dependent methyltransferase	-
STYK_RS01085 (STYK_01930)	comYH	213811..214764 (+)	954	WP_049515760.1	class I SAM-dependent methyltransferase	Machinery gene
STYK_RS01090 (STYK_01940)	-	214815..216005 (+)	1191	WP_033684718.1	acetate kinase	-
STYK_RS01095 (STYK_01950)	rnpA	216155..216526 (+)	372	WP_033679593.1	ribonuclease P protein component	-
STYK_RS01100 (STYK_01960)	-	216501..217325 (+)	825	WP_261805085.1	membrane protein insertase YidC	-

Sequence

Protein

• Length: 153 a.a.
• Molecular weight: 17872.51 Da
• Isoelectric Point: 8.8053

>NTDB_id=85714 STYK_RS01070 WP_261805082.1 212278..212739(+) (comGF/cglF) [Streptococcus toyakuensis strain TP1632]
MAQNSCWLSKSHKVKAFTLLESLIALIVISGSLLLFQAMSQLLISEVRYQQQSEQKEWLLFVEQLEAELDRSQFEKVEGN
RLYMKQDGKDIAMGKSKSDDFRKTDASGRGYQPMIYGLKSAQITEDNQLVRFRFQFQKGLEREFIYRVEKEKS

Nucleotide

• Length: 462 bp

>NTDB_id=85714 STYK_RS01070 WP_261805082.1 212278..212739(+) (comGF/cglF) [Streptococcus toyakuensis strain TP1632]
ATGGCTCAGAACAGTTGTTGGCTATCAAAGAGCCATAAGGTCAAGGCTTTTACCTTGTTAGAATCCCTGATTGCCCTCAT
TGTCATCAGTGGAAGCTTACTCCTCTTTCAAGCCATGAGTCAGCTCCTCATTTCAGAAGTTCGCTACCAGCAACAAAGCG
AGCAAAAAGAGTGGCTCTTGTTTGTGGAGCAGTTGGAGGCAGAATTAGACCGTTCGCAGTTCGAAAAAGTGGAGGGCAAT
CGCCTCTATATGAAGCAAGATGGCAAGGATATCGCTATGGGTAAATCCAAATCAGATGATTTTCGAAAAACTGATGCCAG
TGGACGAGGATATCAGCCTATGATTTATGGACTTAAATCTGCGCAGATTACAGAGGATAATCAACTGGTTCGTTTTCGTT
TCCAGTTTCAAAAAGGCTTAGAAAGGGAGTTCATCTATCGTGTGGAAAAAGAAAAAAGTTAA

Domains

Predicted by InterproScan.

• Putative Competence protein ComGF (ComGF) (45-141)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGF/cglF	Streptococcus mitis SK321	94.118	100	0.941
comGF/cglF	Streptococcus mitis NCTC 12261	92.81	100	0.928
comGF/cglF	Streptococcus pneumoniae Rx1	91.503	100	0.915
comGF/cglF	Streptococcus pneumoniae D39	91.503	100	0.915
comGF/cglF	Streptococcus pneumoniae R6	91.503	100	0.915
comGF/cglF	Streptococcus pneumoniae TIGR4	91.503	100	0.915
comGF	Lactococcus lactis subsp. cremoris KW2	40.714	91.503	0.373