Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | U3938_RS14800 | Genome accession | NZ_CP141196 |
| Coordinates | 3040843..3041823 (-) | Length | 326 a.a. |
| NCBI ID | WP_001055620.1 | Uniprot ID | - |
| Organism | Escherichia coli strain 673 | ||
| Function | type IV pilus retraction (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3035843..3046823
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| U3938_RS14770 (U3938_14770) | yggI | 3036506..3037003 (+) | 498 | WP_000858396.1 | SprT family zinc-dependent metalloprotease | - |
| U3938_RS14775 (U3938_14775) | endA | 3037098..3037805 (+) | 708 | WP_000286500.1 | deoxyribonuclease I | - |
| U3938_RS14780 (U3938_14780) | rsmE | 3037885..3038616 (+) | 732 | WP_001222508.1 | 16S rRNA (uracil(1498)-N(3))-methyltransferase | - |
| U3938_RS14785 (U3938_14785) | gshB | 3038629..3039579 (+) | 951 | WP_000593273.1 | glutathione synthase | - |
| U3938_RS14790 (U3938_14790) | yqgE | 3039688..3040251 (+) | 564 | WP_001053178.1 | YqgE/AlgH family protein | - |
| U3938_RS14795 (U3938_14795) | ruvX | 3040251..3040667 (+) | 417 | WP_000017111.1 | Holliday junction resolvase RuvX | - |
| U3938_RS14800 (U3938_14800) | pilT | 3040843..3041823 (-) | 981 | WP_001055620.1 | PilT/PilU family type 4a pilus ATPase | Machinery gene |
| U3938_RS14805 (U3938_14805) | yggS | 3041841..3042545 (+) | 705 | WP_000997795.1 | pyridoxal phosphate homeostasis protein | - |
| U3938_RS14810 (U3938_14810) | yggT | 3042563..3043129 (+) | 567 | WP_001094831.1 | osmotic shock tolerance protein YggT | - |
| U3938_RS14815 (U3938_14815) | yggU | 3043126..3043416 (+) | 291 | WP_001277222.1 | DUF167 family protein YggU | - |
| U3938_RS14820 (U3938_14820) | rdgB | 3043424..3044017 (+) | 594 | WP_001174747.1 | XTP/dITP diphosphatase | - |
| U3938_RS14825 (U3938_14825) | hemW | 3044010..3045146 (+) | 1137 | WP_000239939.1 | radical SAM family heme chaperone HemW | - |
| U3938_RS14830 (U3938_14830) | yggM | 3045301..3046308 (-) | 1008 | WP_000745217.1 | DUF1202 family protein | - |
Sequence
Protein
Download Length: 326 a.a. Molecular weight: 35903.08 Da Isoelectric Point: 5.5860
>NTDB_id=836401 U3938_RS14800 WP_001055620.1 3040843..3041823(-) (pilT) [Escherichia coli strain 673]
MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGLMEAAPFDAPDVEELLREWLDDDQRAILLENGQLDFAVSLAENQRLRG
SAFAQRQGISLALRLLPSHCPQLEQLGAPTVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVE
YIYASQRCLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDS
FPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVGMLTFQQSYQQR
VGEGRL
MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGLMEAAPFDAPDVEELLREWLDDDQRAILLENGQLDFAVSLAENQRLRG
SAFAQRQGISLALRLLPSHCPQLEQLGAPTVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVE
YIYASQRCLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDS
FPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVGMLTFQQSYQQR
VGEGRL
Nucleotide
Download Length: 981 bp
>NTDB_id=836401 U3938_RS14800 WP_001055620.1 3040843..3041823(-) (pilT) [Escherichia coli strain 673]
ATGAATATGGAAGAAATTGTGGCCCTTAGTGTAAAGCATAACGTCTCGGATCTACACCTGTGCAGCGCCTGGCCCGCACG
ATGGCGCATTCGCGGGCTAATGGAAGCTGCGCCGTTTGATGCGCCGGACGTCGAAGAGCTACTGCGGGAGTGGCTGGATG
ACGATCAGCGGGCAATATTGCTGGAAAATGGCCAGCTGGATTTTGCCGTGTCGCTGGCGGAAAACCAGCGGTTGCGTGGC
AGTGCGTTCGCGCAACGGCAAGGTATTTCTCTGGCATTACGGTTGTTACCTTCGCACTGTCCACAGCTCGAACAGCTTGG
CGCACCAACGGTATTGCCGGAATTACTCAAGAGCGAGAATGGCCTGATTCTGGTGACGGGGGCGACGGGGAGCGGCAAAT
CTACCACGCTGGCGGCGATGGTTGGCTATCTCAATCAACATGCCGATGCGCATATTCTGACGCTGGAAGATCCTGTTGAA
TATATCTATGCCAGCCAGCGATGTTTGATCCAGCAGCGGGAAATTGGTTTGCACTGTATGACGTTCGCATCGGGATTGCG
GGCCGCATTGCGGGAAGATCCTGATGTGATTTTGCTCGGAGAGCTGCGTGACAGCGAGACAATCCGTCTGGCACTGACGG
CGGCAGAAACCGGGCATTTGGTGCTGGCAACATTACATACGCGTGGTGCCGCGCAGGCAGTTGAGCGACTGGTGGATTCA
TTTCCGGCGCAGGAAAAAGATCCCGTACGTAATCAACTGGCAGGTAGTTTACGGGCCGTGTTGTCACAAAAGCTGGAAGT
GGATAAACAGGAAGGACGCGTGGCGCTGTTTGAATTATTGATTAACACTCCCGCGGTGGGGAATTTGATTCGCGAAGGGA
AAACCCACCAGTTACCGCATGTTATTCAAACCGGGCAGCAGGTGGGGATGTTAACGTTTCAGCAGAGTTATCAGCAGCGG
GTGGGGGAAGGGCGTTTGTGA
ATGAATATGGAAGAAATTGTGGCCCTTAGTGTAAAGCATAACGTCTCGGATCTACACCTGTGCAGCGCCTGGCCCGCACG
ATGGCGCATTCGCGGGCTAATGGAAGCTGCGCCGTTTGATGCGCCGGACGTCGAAGAGCTACTGCGGGAGTGGCTGGATG
ACGATCAGCGGGCAATATTGCTGGAAAATGGCCAGCTGGATTTTGCCGTGTCGCTGGCGGAAAACCAGCGGTTGCGTGGC
AGTGCGTTCGCGCAACGGCAAGGTATTTCTCTGGCATTACGGTTGTTACCTTCGCACTGTCCACAGCTCGAACAGCTTGG
CGCACCAACGGTATTGCCGGAATTACTCAAGAGCGAGAATGGCCTGATTCTGGTGACGGGGGCGACGGGGAGCGGCAAAT
CTACCACGCTGGCGGCGATGGTTGGCTATCTCAATCAACATGCCGATGCGCATATTCTGACGCTGGAAGATCCTGTTGAA
TATATCTATGCCAGCCAGCGATGTTTGATCCAGCAGCGGGAAATTGGTTTGCACTGTATGACGTTCGCATCGGGATTGCG
GGCCGCATTGCGGGAAGATCCTGATGTGATTTTGCTCGGAGAGCTGCGTGACAGCGAGACAATCCGTCTGGCACTGACGG
CGGCAGAAACCGGGCATTTGGTGCTGGCAACATTACATACGCGTGGTGCCGCGCAGGCAGTTGAGCGACTGGTGGATTCA
TTTCCGGCGCAGGAAAAAGATCCCGTACGTAATCAACTGGCAGGTAGTTTACGGGCCGTGTTGTCACAAAAGCTGGAAGT
GGATAAACAGGAAGGACGCGTGGCGCTGTTTGAATTATTGATTAACACTCCCGCGGTGGGGAATTTGATTCGCGAAGGGA
AAACCCACCAGTTACCGCATGTTATTCAAACCGGGCAGCAGGTGGGGATGTTAACGTTTCAGCAGAGTTATCAGCAGCGG
GTGGGGGAAGGGCGTTTGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.