Detailed information NTG0831891

Bioinformatically predicted

Overview

• Name: proC
• Type: Machinery gene
• Locus tag: QMK16_RS05290
• Genome accession: NZ_CP125396
• Coordinates: 1013430..1014161 (+)
• Length: 243 a.a.
• NCBI ID: WP_002858388.1
• Uniprot ID: -
• Organism: Campylobacter jejuni strain SKBC57
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1008430..1019161

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QMK16_RS05260 (QMK16_05260)	rpsF	1008572..1008949 (+)	378	WP_002858097.1	30S ribosomal protein S6	-
QMK16_RS05265 (QMK16_05265)	ssb	1008958..1009509 (+)	552	WP_002856575.1	single-stranded DNA-binding protein	-
QMK16_RS05270 (QMK16_05270)	rpsR	1009520..1009780 (+)	261	WP_002853032.1	30S ribosomal protein S18	-
QMK16_RS05275 (QMK16_05275)	lon	1009841..1012216 (-)	2376	WP_002858084.1	endopeptidase La	-
QMK16_RS05280 (QMK16_05280)	-	1012233..1012880 (-)	648	WP_002852961.1	outer membrane protein assembly factor BamD	-
QMK16_RS05285 (QMK16_05285)	fliW	1013041..1013430 (+)	390	WP_002852982.1	flagellar assembly protein FliW	-
QMK16_RS05290 (QMK16_05290)	proC	1013430..1014161 (+)	732	WP_002858388.1	pyrroline-5-carboxylate reductase	Machinery gene
QMK16_RS05295 (QMK16_05295)	ctsT	1014158..1014460 (+)	303	WP_283147443.1	hypothetical protein	Machinery gene
QMK16_RS05300 (QMK16_05300)	-	1014457..1015119 (+)	663	WP_002858296.1	hypothetical protein	-
QMK16_RS05305 (QMK16_05305)	-	1015116..1015568 (+)	453	WP_002859148.1	hypothetical protein	-
QMK16_RS05310 (QMK16_05310)	hemD	1015565..1016194 (-)	630	WP_002858312.1	uroporphyrinogen-III synthase	-
QMK16_RS05315 (QMK16_05315)	thiE	1016172..1016804 (-)	633	WP_002858441.1	thiamine phosphate synthase	-
QMK16_RS05320 (QMK16_05320)	thiD	1016794..1017606 (-)	813	WP_002858043.1	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	-
QMK16_RS05325 (QMK16_05325)	-	1017603..1018289 (-)	687	WP_002858132.1	endonuclease III domain-containing protein	-
QMK16_RS05330 (QMK16_05330)	-	1018286..1019047 (-)	762	WP_002852748.1	ATP-binding protein	-

Sequence

Protein

• Length: 243 a.a.
• Molecular weight: 26586.98 Da
• Isoelectric Point: 8.5934

>NTDB_id=831891 QMK16_RS05290 WP_002858388.1 1013430..1014161(+) (proC) [Campylobacter jejuni strain SKBC57]
MLYILANGSMATALAYGLKDDYEICIVGRSIEKLQALAKEGFKTLLYKDFNIEGKDVILAFKPYALENIAQMLKGQARIL
ISVLANVDFEKLQTIKAQNYVRIIPNTAAKYKASTTPYILKNSHFENEILDILKTFGSAYKLDNEIQMNAAMAISGCAPA
FLALIAESIANAGVYEGLSKELSLNLTRSLFKSSNALLEHEHPAIIKENICSPGGVTIKGIKILEQKGIRGSFFEAINAS
SAK

Nucleotide

• Length: 732 bp

>NTDB_id=831891 QMK16_RS05290 WP_002858388.1 1013430..1014161(+) (proC) [Campylobacter jejuni strain SKBC57]
ATGCTCTATATACTTGCAAATGGATCTATGGCAACAGCCTTAGCCTATGGGTTAAAAGATGATTATGAAATTTGTATAGT
AGGAAGAAGTATAGAAAAACTTCAAGCCCTCGCCAAAGAAGGCTTTAAAACCTTACTTTACAAAGATTTTAACATAGAAG
GTAAAGATGTTATTTTAGCATTTAAACCTTATGCTTTAGAAAATATTGCTCAAATGCTAAAAGGACAAGCACGTATCTTA
ATCTCTGTTTTAGCCAATGTTGATTTTGAAAAACTACAAACCATCAAAGCTCAAAATTATGTTAGAATAATACCCAATAC
AGCAGCTAAATACAAGGCTTCAACCACACCATATATACTTAAAAACTCTCATTTTGAAAATGAAATTTTAGACATTTTAA
AAACTTTTGGCTCGGCTTATAAATTAGATAATGAAATACAAATGAATGCAGCTATGGCGATTAGCGGCTGCGCTCCTGCT
TTTTTAGCACTTATAGCAGAAAGCATTGCTAATGCTGGAGTTTATGAAGGTTTGTCAAAAGAACTTAGTCTCAATCTTAC
GCGCTCTTTATTTAAAAGCTCTAATGCTTTACTAGAACATGAACATCCAGCTATTATCAAAGAAAATATTTGCTCCCCTG
GCGGAGTTACAATAAAAGGCATAAAAATACTCGAACAAAAAGGAATTCGCGGAAGTTTTTTTGAAGCCATAAATGCTAGC
AGCGCTAAATGA

Domains

Predicted by InterproScan.

• Pyrroline-5-carboxylate reductase dimerisation (P5CR_dimer) (145-242)

• NADP oxidoreductase coenzyme F420-dependent (F420_oxidored) (4-85)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
proC	Campylobacter jejuni subsp. jejuni 81-176	99.177	100	0.992