Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | PJW05_RS01385 | Genome accession | NZ_CP116304 |
| Coordinates | 289465..290499 (+) | Length | 344 a.a. |
| NCBI ID | WP_271410162.1 | Uniprot ID | - |
| Organism | Pseudomonas sp. Q1-7 | ||
| Function | type IV pilus retraction (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 284465..295499
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PJW05_RS01360 | - | 284698..286686 (-) | 1989 | WP_271410157.1 | dynamin-like GTPase family protein | - |
| PJW05_RS01365 | - | 286880..287176 (-) | 297 | WP_271410158.1 | DUF167 domain-containing protein | - |
| PJW05_RS01370 | - | 287173..287766 (-) | 594 | WP_271410159.1 | YggT family protein | - |
| PJW05_RS01375 | proC | 287777..288595 (-) | 819 | WP_271410160.1 | pyrroline-5-carboxylate reductase | - |
| PJW05_RS01380 | - | 288606..289301 (-) | 696 | WP_271410161.1 | YggS family pyridoxal phosphate-dependent enzyme | - |
| PJW05_RS01385 | pilT | 289465..290499 (+) | 1035 | WP_271410162.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| PJW05_RS01390 | pilU | 290539..291684 (+) | 1146 | WP_271410163.1 | PilT/PilU family type 4a pilus ATPase | Machinery gene |
| PJW05_RS01395 | - | 291808..292203 (+) | 396 | WP_271410164.1 | TM2 domain-containing protein | - |
| PJW05_RS01400 | - | 292448..293827 (+) | 1380 | WP_271410165.1 | pyridoxal-phosphate dependent enzyme | - |
| PJW05_RS01405 | - | 293824..295008 (+) | 1185 | WP_271410166.1 | PLP-dependent aspartate aminotransferase family protein | - |
Sequence
Protein
Download Length: 344 a.a. Molecular weight: 37915.70 Da Isoelectric Point: 6.8360
>NTDB_id=776495 PJW05_RS01385 WP_271410162.1 289465..290499(+) (pilT) [Pseudomonas sp. Q1-7]
MDITELLAFSAKQGASDLHLSAGLPPMIRVDGDVRRINLPALDHKQVHALIYDIMNDKQRKDYEEFLETDFSFEVPGVAR
FRVNAFNQNRGAGAVFRTIPSKVLTMEDLGMGEIFKKISDVPRGLVLVTGPTGSGKSTTLAAMLDYLNSTKYHHILTVED
PIEFVHESKKCLINQREVHRDTLGFNEALRSALREDPDIILVGEMRDLETIRLALTAAETGHLVFGTLHTTSAAKTIDRV
VDVFPAEEKAMVRSMLSESLQAVISQTLLKKIGGGRVAAHEIMIGTPAIRNLIREDKVAQMYSAIQTGGSLGMQTLDMCL
KGLVSKGLVSRESAREKAKSPENF
MDITELLAFSAKQGASDLHLSAGLPPMIRVDGDVRRINLPALDHKQVHALIYDIMNDKQRKDYEEFLETDFSFEVPGVAR
FRVNAFNQNRGAGAVFRTIPSKVLTMEDLGMGEIFKKISDVPRGLVLVTGPTGSGKSTTLAAMLDYLNSTKYHHILTVED
PIEFVHESKKCLINQREVHRDTLGFNEALRSALREDPDIILVGEMRDLETIRLALTAAETGHLVFGTLHTTSAAKTIDRV
VDVFPAEEKAMVRSMLSESLQAVISQTLLKKIGGGRVAAHEIMIGTPAIRNLIREDKVAQMYSAIQTGGSLGMQTLDMCL
KGLVSKGLVSRESAREKAKSPENF
Nucleotide
Download Length: 1035 bp
>NTDB_id=776495 PJW05_RS01385 WP_271410162.1 289465..290499(+) (pilT) [Pseudomonas sp. Q1-7]
ATGGACATTACTGAGCTGCTTGCCTTCAGCGCCAAGCAGGGCGCTTCGGACCTGCATCTCTCGGCCGGCCTGCCACCCAT
GATTCGCGTCGATGGCGACGTGCGCCGGATCAACCTGCCGGCCCTGGACCACAAGCAGGTCCACGCGCTGATCTACGACA
TCATGAACGACAAGCAGCGCAAGGATTACGAAGAGTTCCTCGAGACCGACTTCTCCTTCGAAGTGCCTGGCGTCGCGCGC
TTCCGGGTCAACGCCTTCAACCAGAACCGCGGCGCTGGCGCCGTGTTCCGGACCATTCCGTCCAAAGTGTTGACCATGGA
AGACCTGGGGATGGGCGAGATTTTCAAGAAAATCTCCGACGTTCCCCGTGGTCTGGTGCTGGTCACCGGTCCCACCGGTT
CGGGCAAGTCCACCACCCTGGCGGCCATGCTCGACTACCTGAACAGCACCAAGTACCACCACATCCTCACCGTGGAAGAC
CCGATCGAATTCGTCCACGAGTCGAAGAAGTGCCTGATCAACCAGCGGGAAGTGCACCGCGACACCCTGGGGTTCAACGA
AGCCCTGCGCTCGGCCCTGCGTGAAGACCCGGACATCATCCTGGTGGGCGAGATGCGCGACCTGGAAACCATCCGCCTGG
CGTTGACCGCCGCGGAAACCGGTCACCTGGTATTCGGCACCCTGCACACCACTTCCGCGGCCAAGACCATCGACCGGGTG
GTGGACGTGTTCCCGGCCGAGGAAAAGGCTATGGTCCGCTCCATGCTCTCCGAGTCCCTGCAGGCGGTGATTTCCCAGAC
CCTGCTGAAGAAGATCGGCGGCGGCCGGGTGGCGGCCCACGAGATCATGATCGGCACCCCGGCCATCCGTAACCTGATCC
GCGAGGACAAGGTGGCGCAGATGTACTCGGCCATCCAGACCGGCGGCTCGCTTGGCATGCAGACCCTCGACATGTGCCTC
AAAGGGCTGGTCAGCAAGGGGCTGGTCAGCCGCGAGAGCGCGCGGGAAAAGGCCAAGAGCCCGGAAAACTTCTGA
ATGGACATTACTGAGCTGCTTGCCTTCAGCGCCAAGCAGGGCGCTTCGGACCTGCATCTCTCGGCCGGCCTGCCACCCAT
GATTCGCGTCGATGGCGACGTGCGCCGGATCAACCTGCCGGCCCTGGACCACAAGCAGGTCCACGCGCTGATCTACGACA
TCATGAACGACAAGCAGCGCAAGGATTACGAAGAGTTCCTCGAGACCGACTTCTCCTTCGAAGTGCCTGGCGTCGCGCGC
TTCCGGGTCAACGCCTTCAACCAGAACCGCGGCGCTGGCGCCGTGTTCCGGACCATTCCGTCCAAAGTGTTGACCATGGA
AGACCTGGGGATGGGCGAGATTTTCAAGAAAATCTCCGACGTTCCCCGTGGTCTGGTGCTGGTCACCGGTCCCACCGGTT
CGGGCAAGTCCACCACCCTGGCGGCCATGCTCGACTACCTGAACAGCACCAAGTACCACCACATCCTCACCGTGGAAGAC
CCGATCGAATTCGTCCACGAGTCGAAGAAGTGCCTGATCAACCAGCGGGAAGTGCACCGCGACACCCTGGGGTTCAACGA
AGCCCTGCGCTCGGCCCTGCGTGAAGACCCGGACATCATCCTGGTGGGCGAGATGCGCGACCTGGAAACCATCCGCCTGG
CGTTGACCGCCGCGGAAACCGGTCACCTGGTATTCGGCACCCTGCACACCACTTCCGCGGCCAAGACCATCGACCGGGTG
GTGGACGTGTTCCCGGCCGAGGAAAAGGCTATGGTCCGCTCCATGCTCTCCGAGTCCCTGCAGGCGGTGATTTCCCAGAC
CCTGCTGAAGAAGATCGGCGGCGGCCGGGTGGCGGCCCACGAGATCATGATCGGCACCCCGGCCATCCGTAACCTGATCC
GCGAGGACAAGGTGGCGCAGATGTACTCGGCCATCCAGACCGGCGGCTCGCTTGGCATGCAGACCCTCGACATGTGCCTC
AAAGGGCTGGTCAGCAAGGGGCTGGTCAGCCGCGAGAGCGCGCGGGAAAAGGCCAAGAGCCCGGAAAACTTCTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Pseudomonas aeruginosa PAK |
95.058 |
100 |
0.951 |
| pilT | Pseudomonas stutzeri DSM 10701 |
94.186 |
100 |
0.942 |
| pilT | Acinetobacter nosocomialis M2 |
86.628 |
100 |
0.866 |
| pilT | Acinetobacter baumannii D1279779 |
86.337 |
100 |
0.863 |
| pilT | Acinetobacter baumannii strain A118 |
86.337 |
100 |
0.863 |
| pilT | Acinetobacter baylyi ADP1 |
83.721 |
100 |
0.837 |
| pilT | Legionella pneumophila strain Lp02 |
75.74 |
98.256 |
0.744 |
| pilT | Legionella pneumophila strain ERS1305867 |
75.74 |
98.256 |
0.744 |
| pilT | Neisseria meningitidis 8013 |
67.826 |
100 |
0.68 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
69.436 |
97.965 |
0.68 |
| pilT | Vibrio cholerae strain A1552 |
69.436 |
97.965 |
0.68 |
| pilT | Neisseria gonorrhoeae MS11 |
67.536 |
100 |
0.677 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
52.174 |
100 |
0.523 |
| pilU | Vibrio cholerae strain A1552 |
40.29 |
100 |
0.404 |
| pilU | Acinetobacter baylyi ADP1 |
39.884 |
100 |
0.401 |
| pilU | Pseudomonas stutzeri DSM 10701 |
39.42 |
100 |
0.395 |