Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | PE066_RS12970 | Genome accession | NZ_CP116009 |
| Coordinates | 2732187..2733230 (+) | Length | 347 a.a. |
| NCBI ID | WP_271232955.1 | Uniprot ID | - |
| Organism | Ramlibacter tataouinensis strain DMF-7 | ||
| Function | type IV pilus retraction (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2727187..2738230
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PE066_RS12955 (PE066_12955) | glpK | 2729247..2730740 (+) | 1494 | WP_271232952.1 | glycerol kinase GlpK | - |
| PE066_RS12960 (PE066_12960) | - | 2730793..2731341 (+) | 549 | WP_271232953.1 | DUF3617 domain-containing protein | - |
| PE066_RS12965 (PE066_12965) | - | 2731446..2732138 (-) | 693 | WP_271232954.1 | YggS family pyridoxal phosphate-dependent enzyme | - |
| PE066_RS12970 (PE066_12970) | pilT | 2732187..2733230 (+) | 1044 | WP_271232955.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| PE066_RS12975 (PE066_12975) | pilU | 2733276..2734412 (+) | 1137 | WP_271232956.1 | PilT/PilU family type 4a pilus ATPase | Machinery gene |
| PE066_RS12980 (PE066_12980) | - | 2734642..2735544 (+) | 903 | WP_271232957.1 | NAD(P)-dependent oxidoreductase | - |
| PE066_RS12985 (PE066_12985) | - | 2735691..2736332 (-) | 642 | WP_271232958.1 | BON domain-containing protein | - |
| PE066_RS12990 (PE066_12990) | - | 2736329..2736928 (-) | 600 | WP_271232959.1 | phosphoheptose isomerase | - |
Sequence
Protein
Download Length: 347 a.a. Molecular weight: 38181.93 Da Isoelectric Point: 6.7708
>NTDB_id=774917 PE066_RS12970 WP_271232955.1 2732187..2733230(+) (pilT) [Ramlibacter tataouinensis strain DMF-7]
MDITQLLAFSVKNKASDLHLSAGLPPMIRVHGDVRRINVDALDHKQVHAMVYDIMNDTQRKQYEEFLECDFSFEIEGLAR
FRVNAFNQNRGAAAVFRTIPSKILTLEQLNAPKIFGDLALKPRGLVLVTGPTGSGKSTTLAAMVNYLNETEYGHILTVED
PIEFVHESKKCLINQREVGPMTLSFAAALKSALREDPDAILVGEMRDLETIRLAMTAAETGHLVFGTLHTSSAAKTIDRV
IDVFPAEEKEMVRAMLSESLQAVISQTLCKTKDGSGRVAAHEIMLGTSAIRNLIREAKVAQMYSAIQTGNSFGMQTLDQN
LSDLVKRNVISPAEARSKAKIPENFPG
MDITQLLAFSVKNKASDLHLSAGLPPMIRVHGDVRRINVDALDHKQVHAMVYDIMNDTQRKQYEEFLECDFSFEIEGLAR
FRVNAFNQNRGAAAVFRTIPSKILTLEQLNAPKIFGDLALKPRGLVLVTGPTGSGKSTTLAAMVNYLNETEYGHILTVED
PIEFVHESKKCLINQREVGPMTLSFAAALKSALREDPDAILVGEMRDLETIRLAMTAAETGHLVFGTLHTSSAAKTIDRV
IDVFPAEEKEMVRAMLSESLQAVISQTLCKTKDGSGRVAAHEIMLGTSAIRNLIREAKVAQMYSAIQTGNSFGMQTLDQN
LSDLVKRNVISPAEARSKAKIPENFPG
Nucleotide
Download Length: 1044 bp
>NTDB_id=774917 PE066_RS12970 WP_271232955.1 2732187..2733230(+) (pilT) [Ramlibacter tataouinensis strain DMF-7]
GTGGATATTACCCAGCTGCTGGCATTCAGCGTGAAGAACAAGGCTTCGGACCTGCACCTGTCGGCCGGCCTGCCACCCAT
GATCCGCGTGCACGGCGACGTGCGCCGCATCAACGTCGACGCGCTGGACCACAAGCAGGTGCACGCCATGGTGTACGACA
TCATGAACGACACCCAGCGCAAGCAGTACGAGGAATTCCTCGAGTGCGACTTCTCGTTCGAGATCGAGGGGCTGGCGCGC
TTCCGGGTCAACGCCTTCAACCAGAACCGCGGCGCCGCCGCCGTGTTCCGGACCATCCCGTCCAAGATCCTGACGCTGGA
GCAGCTGAACGCGCCCAAGATCTTCGGCGACCTGGCGCTCAAGCCGCGCGGGCTGGTGCTGGTCACCGGCCCCACCGGCT
CGGGCAAGTCGACCACGCTGGCGGCGATGGTCAACTACCTGAACGAGACCGAGTACGGACACATCCTGACGGTGGAAGAC
CCGATCGAGTTCGTGCACGAATCCAAGAAGTGCCTGATCAACCAGCGCGAGGTCGGGCCGATGACGCTGTCGTTCGCCGC
GGCGCTGAAGTCGGCGCTGCGCGAGGACCCGGACGCCATCCTGGTGGGCGAAATGCGCGACCTCGAGACGATCCGGCTGG
CCATGACGGCGGCCGAGACCGGCCACCTGGTGTTCGGCACCCTGCACACCTCGAGTGCCGCCAAGACCATCGACCGGGTC
ATCGACGTGTTCCCGGCCGAAGAGAAGGAAATGGTGCGCGCCATGCTGTCGGAGTCGCTGCAGGCGGTGATCTCGCAGAC
CCTGTGCAAGACCAAGGACGGCTCGGGCCGGGTGGCGGCGCACGAGATCATGCTGGGCACCTCGGCCATCCGCAACCTGA
TCCGCGAGGCCAAGGTCGCGCAGATGTACTCGGCCATCCAGACCGGCAACAGCTTCGGCATGCAGACGCTGGACCAGAAC
CTGTCGGACCTGGTCAAGCGCAACGTGATCTCGCCGGCCGAAGCGCGGTCGAAGGCGAAGATTCCCGAGAATTTCCCCGG
CTAG
GTGGATATTACCCAGCTGCTGGCATTCAGCGTGAAGAACAAGGCTTCGGACCTGCACCTGTCGGCCGGCCTGCCACCCAT
GATCCGCGTGCACGGCGACGTGCGCCGCATCAACGTCGACGCGCTGGACCACAAGCAGGTGCACGCCATGGTGTACGACA
TCATGAACGACACCCAGCGCAAGCAGTACGAGGAATTCCTCGAGTGCGACTTCTCGTTCGAGATCGAGGGGCTGGCGCGC
TTCCGGGTCAACGCCTTCAACCAGAACCGCGGCGCCGCCGCCGTGTTCCGGACCATCCCGTCCAAGATCCTGACGCTGGA
GCAGCTGAACGCGCCCAAGATCTTCGGCGACCTGGCGCTCAAGCCGCGCGGGCTGGTGCTGGTCACCGGCCCCACCGGCT
CGGGCAAGTCGACCACGCTGGCGGCGATGGTCAACTACCTGAACGAGACCGAGTACGGACACATCCTGACGGTGGAAGAC
CCGATCGAGTTCGTGCACGAATCCAAGAAGTGCCTGATCAACCAGCGCGAGGTCGGGCCGATGACGCTGTCGTTCGCCGC
GGCGCTGAAGTCGGCGCTGCGCGAGGACCCGGACGCCATCCTGGTGGGCGAAATGCGCGACCTCGAGACGATCCGGCTGG
CCATGACGGCGGCCGAGACCGGCCACCTGGTGTTCGGCACCCTGCACACCTCGAGTGCCGCCAAGACCATCGACCGGGTC
ATCGACGTGTTCCCGGCCGAAGAGAAGGAAATGGTGCGCGCCATGCTGTCGGAGTCGCTGCAGGCGGTGATCTCGCAGAC
CCTGTGCAAGACCAAGGACGGCTCGGGCCGGGTGGCGGCGCACGAGATCATGCTGGGCACCTCGGCCATCCGCAACCTGA
TCCGCGAGGCCAAGGTCGCGCAGATGTACTCGGCCATCCAGACCGGCAACAGCTTCGGCATGCAGACGCTGGACCAGAAC
CTGTCGGACCTGGTCAAGCGCAACGTGATCTCGCCGGCCGAAGCGCGGTCGAAGGCGAAGATTCCCGAGAATTTCCCCGG
CTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Pseudomonas aeruginosa PAK |
78.261 |
99.424 |
0.778 |
| pilT | Acinetobacter nosocomialis M2 |
77.971 |
99.424 |
0.775 |
| pilT | Acinetobacter baumannii D1279779 |
77.971 |
99.424 |
0.775 |
| pilT | Acinetobacter baumannii strain A118 |
77.971 |
99.424 |
0.775 |
| pilT | Pseudomonas stutzeri DSM 10701 |
77.391 |
99.424 |
0.769 |
| pilT | Acinetobacter baylyi ADP1 |
75.362 |
99.424 |
0.749 |
| pilT | Legionella pneumophila strain Lp02 |
73.451 |
97.695 |
0.718 |
| pilT | Legionella pneumophila strain ERS1305867 |
73.451 |
97.695 |
0.718 |
| pilT | Neisseria gonorrhoeae MS11 |
67.826 |
99.424 |
0.674 |
| pilT | Neisseria meningitidis 8013 |
67.826 |
99.424 |
0.674 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
67.742 |
98.271 |
0.666 |
| pilT | Vibrio cholerae strain A1552 |
67.742 |
98.271 |
0.666 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
50.145 |
99.424 |
0.499 |
| pilU | Vibrio cholerae strain A1552 |
42.985 |
96.542 |
0.415 |
| pilU | Acinetobacter baylyi ADP1 |
41.04 |
99.712 |
0.409 |
| pilU | Pseudomonas stutzeri DSM 10701 |
41.791 |
96.542 |
0.403 |