Detailed information NTG0771616

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: PCP76_RS15300
• Genome accession: NZ_CP115297
• Coordinates: 3243437..3245662 (-)
• Length: 741 a.a.
• NCBI ID: WP_058179039.1
• Uniprot ID: -
• Organism: Pseudomonas aeruginosa strain 135
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3238437..3250662

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PCP76_RS15265 (PCP76_15250)	murB	3238827..3239846 (-)	1020	WP_003124431.1	UDP-N-acetylmuramate dehydrogenase	-
PCP76_RS15270 (PCP76_15255)	-	3239843..3240307 (-)	465	WP_003091154.1	low molecular weight protein-tyrosine-phosphatase	-
PCP76_RS15275 (PCP76_15260)	kdsB	3240307..3241071 (-)	765	WP_058179037.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
PCP76_RS15280 (PCP76_15265)	-	3241071..3241256 (-)	186	WP_003091157.1	Trm112 family protein	-
PCP76_RS15285 (PCP76_15270)	lpxK	3241294..3242292 (-)	999	WP_058179038.1	tetraacyldisaccharide 4'-kinase	-
PCP76_RS15290 (PCP76_15275)	-	3242292..3242732 (-)	441	WP_003091161.1	ExbD/TolR family protein	-
PCP76_RS15295 (PCP76_15280)	exbB	3242729..3243364 (-)	636	WP_003091163.1	MotA/TolQ/ExbB proton channel family protein	Machinery gene
PCP76_RS15300 (PCP76_15285)	comA	3243437..3245662 (-)	2226	WP_058179039.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
PCP76_RS15305 (PCP76_15290)	-	3245793..3246326 (+)	534	WP_003091165.1	DUF2062 domain-containing protein	-
PCP76_RS15310 (PCP76_15295)	-	3246414..3247658 (-)	1245	WP_033975958.1	lipoprotein-releasing ABC transporter permease subunit	-
PCP76_RS15315 (PCP76_15300)	lolD	3247728..3248411 (-)	684	WP_003091168.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
PCP76_RS15320 (PCP76_15305)	-	3248404..3249654 (-)	1251	WP_003091170.1	lipoprotein-releasing ABC transporter permease subunit	-
PCP76_RS15325 (PCP76_15310)	-	3249757..3250356 (+)	600	WP_033975956.1	PilZ domain-containing protein	-

Sequence

Protein

• Length: 741 a.a.
• Molecular weight: 79994.63 Da
• Isoelectric Point: 10.5155

>NTDB_id=771616 PCP76_RS15300 WP_058179039.1 3243437..3245662(-) (comA) [Pseudomonas aeruginosa strain 135]
MRLGLPALAAGLLALRFLAELPSVGWLLGMAAAGLLLLFGRLYWLGLFLLGFAWACGSAQVALDGRLAAELDGRTLWLEG
RVVDLPASGEGITRFRLEEVSGARGVLLPERLRLSWRGAPPLMGGERWRLAVTLKRPRGLVNAAGFDYEAWLLGQRVGAV
GTVKAGQRLQPASGLDAWRDAWRQRLLAVDAQGRGAALAALVLGDGSGLSAAEWRMFQDTGTVHLMVISGSHISLLAGML
YGLVAALHRLGCWPRRLPWLPCACALGLLGAWSYGLMAGFEVPVRRACLMVSLALVWRLRFRHLGLLTPLLGTLVLVLLV
EPLASLQAGFWLSFLAVALLLWLFAGRLGRWRWWAAWGRAQWGMALGLAMPLLALGLPLSLSGALANLLAVPWIELLVVP
PALAGSLLLWVPGLGEGLLRAAGVSLDLLFRALGLLAGLAEAWQPPAAAAWSVALGMLGALCWLAPAGLPLRALGAALLL
PALLPSSPPVEWGRAEVRVLDVGQGLAVLVRTREHALLYDSGARQGALDMGERVVVPVLRSLDLRRLDGLLLSHADNDHA
GGAPTVASRFPPGWLVSGEPARLPSPLFADSCDERRWSWDGVVFEQWAWAQAGDSNDRSCVLRVEADGELLLLTGDMSRA
AEHAWLARQADPRVDWLLAPHHGSRSSSGVAFVLRTRPRHVLVSRGWRNAFGHPHGEVMERYARVAAQVHDTARDGALTF
LLGSRGSARRERDSAHFWREK

Nucleotide

• Length: 2226 bp

>NTDB_id=771616 PCP76_RS15300 WP_058179039.1 3243437..3245662(-) (comA) [Pseudomonas aeruginosa strain 135]
ATGCGCCTGGGATTGCCAGCCCTCGCCGCGGGGCTGCTGGCCCTGCGCTTCCTGGCGGAATTGCCGTCGGTCGGCTGGCT
GCTGGGCATGGCCGCCGCCGGACTGTTGCTGCTGTTCGGCCGGCTGTACTGGCTGGGCTTGTTCCTGCTCGGGTTCGCCT
GGGCCTGCGGCTCGGCGCAAGTCGCCCTGGACGGACGCCTGGCCGCCGAGCTGGATGGTCGCACCCTTTGGCTGGAGGGG
CGTGTGGTCGATCTGCCGGCGAGCGGCGAGGGCATCACGCGCTTCCGGCTGGAGGAGGTCAGTGGCGCGCGGGGCGTCCT
TCTTCCCGAGCGTCTGCGCCTGAGCTGGCGTGGTGCGCCGCCGCTGATGGGCGGCGAACGCTGGCGCCTGGCGGTGACCC
TGAAACGCCCTCGCGGCCTGGTGAACGCGGCGGGTTTCGACTACGAAGCCTGGTTGTTGGGGCAGCGGGTCGGTGCCGTT
GGAACGGTGAAGGCGGGCCAGCGCCTGCAGCCGGCCAGTGGCCTGGATGCCTGGCGCGACGCCTGGCGCCAGCGCCTCCT
GGCGGTCGACGCGCAGGGGCGCGGCGCCGCCCTGGCGGCGCTGGTGCTGGGGGATGGCTCTGGATTGAGCGCGGCCGAGT
GGCGCATGTTCCAGGACACCGGCACCGTGCATCTGATGGTCATCTCCGGTTCGCATATCTCGTTGCTGGCGGGGATGCTC
TATGGCCTGGTGGCGGCCTTGCATCGCCTGGGCTGCTGGCCGCGGCGCCTGCCCTGGCTGCCCTGTGCCTGCGCCCTGGG
TTTGCTTGGTGCCTGGAGCTACGGGTTGATGGCGGGCTTCGAGGTCCCGGTGCGGCGTGCCTGCCTGATGGTCAGCCTGG
CGCTGGTCTGGCGCCTGCGTTTCCGCCACCTGGGCTTGCTGACCCCGCTGCTGGGAACGCTGGTGCTGGTCTTGCTGGTC
GAGCCGCTGGCCAGCCTGCAGGCGGGGTTCTGGCTGTCGTTCCTGGCGGTTGCCCTGCTGCTCTGGCTGTTCGCCGGGCG
CCTTGGGCGCTGGCGCTGGTGGGCGGCCTGGGGGCGTGCGCAGTGGGGGATGGCGCTGGGGCTGGCGATGCCGCTGCTGG
CGCTGGGCCTGCCGTTGAGCCTGAGCGGAGCGCTGGCCAACCTGCTGGCGGTACCTTGGATCGAACTGCTGGTAGTGCCC
CCGGCCCTGGCGGGGAGCCTGCTGCTGTGGGTACCCGGGCTGGGCGAGGGGCTGCTTCGCGCCGCTGGCGTTTCGCTGGA
CCTGCTGTTTCGTGCGCTTGGCCTGCTGGCGGGCCTGGCCGAGGCCTGGCAGCCACCCGCCGCAGCGGCCTGGAGCGTAG
CGCTGGGCATGCTCGGCGCGCTCTGCTGGCTGGCGCCGGCTGGCTTGCCGTTGCGTGCCCTCGGTGCCGCGTTGCTACTG
CCGGCGTTGTTGCCGTCATCGCCGCCTGTCGAATGGGGGCGGGCGGAAGTGCGGGTGCTGGACGTCGGCCAGGGGCTGGC
CGTGCTGGTGCGTACCCGGGAGCATGCCTTGCTCTATGACAGCGGTGCGCGGCAGGGGGCGCTCGACATGGGCGAGCGGG
TGGTGGTGCCGGTGCTGCGCAGCCTGGACCTGCGGCGCCTGGACGGCCTGTTGCTGAGTCATGCCGACAACGACCATGCA
GGCGGTGCTCCTACGGTCGCTTCCCGATTCCCGCCGGGTTGGCTGGTCAGCGGCGAACCCGCGCGCCTGCCTTCGCCGTT
GTTCGCGGACAGCTGTGACGAGCGGCGCTGGTCCTGGGATGGCGTGGTTTTCGAACAGTGGGCATGGGCGCAGGCCGGCG
ACAGCAACGACCGCTCCTGCGTGCTGAGGGTCGAGGCCGATGGCGAACTCCTGCTGCTGACCGGGGACATGTCGCGTGCG
GCCGAGCATGCCTGGCTGGCGCGACAGGCCGATCCGCGGGTCGACTGGTTGCTGGCGCCGCACCACGGCAGCCGCAGCTC
CTCCGGAGTCGCCTTCGTGTTGCGTACGCGGCCTCGCCATGTGCTGGTCTCGCGAGGTTGGCGCAACGCCTTCGGCCATC
CCCATGGCGAAGTGATGGAGCGTTACGCGAGGGTCGCCGCGCAGGTCCACGACACGGCACGCGACGGTGCCCTGACGTTT
CTCCTCGGAAGCCGTGGCAGTGCACGCCGGGAGCGTGATTCGGCGCACTTCTGGCGGGAAAAATGA

Domains

Predicted by InterproScan.

• Competence protein (Competence) (201-464)

• Domain of unknown function (DUF4131) (DUF4131) (21-168)

• Metallo-beta-lactamase superfamily (Lactamase_B) (501-666)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	58.669	97.301	0.571
comA	Ralstonia pseudosolanacearum GMI1000	35.611	100	0.366