Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | OZ656_RS02945 | Genome accession | NZ_CP114373 |
| Coordinates | 642572..643606 (+) | Length | 344 a.a. |
| NCBI ID | WP_011784082.1 | Uniprot ID | U7NXP1 |
| Organism | Marinobacter sp. LM1 | ||
| Function | type IV pilus retraction (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 637572..648606
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OZ656_RS02925 (OZ656_02915) | - | 638077..640041 (-) | 1965 | WP_278350756.1 | dynamin family protein | - |
| OZ656_RS02930 (OZ656_02920) | - | 640303..640887 (-) | 585 | WP_011784079.1 | YggT family protein | - |
| OZ656_RS02935 (OZ656_02925) | proC | 640910..641743 (-) | 834 | WP_113879490.1 | pyrroline-5-carboxylate reductase | - |
| OZ656_RS02940 (OZ656_02930) | - | 641806..642519 (-) | 714 | WP_278350755.1 | YggS family pyridoxal phosphate-dependent enzyme | - |
| OZ656_RS02945 (OZ656_02935) | pilT | 642572..643606 (+) | 1035 | WP_011784082.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| OZ656_RS02950 (OZ656_02940) | pilU | 643628..644749 (+) | 1122 | WP_011784083.1 | PilT/PilU family type 4a pilus ATPase | Machinery gene |
| OZ656_RS02955 (OZ656_02945) | - | 644896..646332 (+) | 1437 | WP_023011731.1 | OmpP1/FadL family transporter | - |
| OZ656_RS02960 (OZ656_02950) | - | 646370..646738 (-) | 369 | WP_278350754.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 344 a.a. Molecular weight: 38128.90 Da Isoelectric Point: 6.2447
>NTDB_id=765690 OZ656_RS02945 WP_011784082.1 642572..643606(+) (pilT) [Marinobacter sp. LM1]
MDITELLAFSAKQGASDLHLSAGLPPMIRVDGDVRRINLPPMEHKEVHGLIYDIMNDKQRKDYEEFLETDFSFEVPGVAR
FRVNAFNQNRGAGAVFRTIPSKVLTMEDLGMGQVFKDISSVPRGLVLVTGPTGSGKSTTLAAMMDYINDTRYEHILTIED
PIEFVHESKKCLVNQREVHRDTLGFNEALRSALREDPDIILVGELRDLETIRLALTAAETGHLVFGTLHTTSAAKTIDRV
VDVFPAEEKSMVRSMLSESLQAVISQTLMKKMGGGRIAAHEIMIGTAAIRNLIREDKIAQMYSAIQTGGSLGMQTLDQCL
ERLLQKGLISREAARAKAKMPDNF
MDITELLAFSAKQGASDLHLSAGLPPMIRVDGDVRRINLPPMEHKEVHGLIYDIMNDKQRKDYEEFLETDFSFEVPGVAR
FRVNAFNQNRGAGAVFRTIPSKVLTMEDLGMGQVFKDISSVPRGLVLVTGPTGSGKSTTLAAMMDYINDTRYEHILTIED
PIEFVHESKKCLVNQREVHRDTLGFNEALRSALREDPDIILVGELRDLETIRLALTAAETGHLVFGTLHTTSAAKTIDRV
VDVFPAEEKSMVRSMLSESLQAVISQTLMKKMGGGRIAAHEIMIGTAAIRNLIREDKIAQMYSAIQTGGSLGMQTLDQCL
ERLLQKGLISREAARAKAKMPDNF
Nucleotide
Download Length: 1035 bp
>NTDB_id=765690 OZ656_RS02945 WP_011784082.1 642572..643606(+) (pilT) [Marinobacter sp. LM1]
ATGGATATTACTGAACTGCTTGCCTTTTCGGCCAAACAGGGTGCGTCGGATTTGCACCTGTCTGCCGGTTTGCCCCCAAT
GATTCGTGTCGACGGCGATGTACGCCGGATCAACCTGCCCCCCATGGAGCACAAAGAAGTGCACGGGTTGATCTACGACA
TCATGAACGACAAGCAGCGTAAGGACTACGAAGAGTTCCTGGAAACCGACTTCTCGTTCGAAGTTCCCGGCGTGGCCCGC
TTCCGGGTTAACGCCTTCAACCAGAATCGTGGCGCCGGCGCGGTATTCCGTACCATCCCGTCGAAAGTTCTGACCATGGA
AGATCTGGGCATGGGCCAGGTTTTCAAGGATATTTCTTCCGTGCCTCGTGGTCTGGTACTGGTAACCGGGCCTACCGGTT
CCGGTAAGTCCACCACCCTGGCGGCGATGATGGATTACATCAACGATACCCGCTACGAGCACATCCTCACCATCGAGGAC
CCGATCGAATTCGTGCACGAATCCAAGAAGTGTCTGGTGAACCAGCGGGAAGTGCATCGGGATACCCTGGGCTTTAACGA
AGCCTTGCGTTCGGCCCTGCGGGAAGACCCGGACATCATTCTGGTAGGTGAGCTCCGGGACCTGGAAACCATTCGTCTGG
CACTGACCGCTGCGGAAACCGGCCACCTGGTCTTCGGCACCCTGCACACCACCTCCGCCGCGAAAACCATCGACCGGGTA
GTGGATGTATTCCCTGCGGAAGAAAAGTCCATGGTTCGCTCCATGCTGTCGGAATCACTGCAGGCGGTTATCTCCCAGAC
CCTGATGAAGAAAATGGGCGGCGGCCGTATTGCCGCCCACGAAATCATGATCGGCACCGCCGCCATCCGGAACCTGATCC
GGGAAGACAAGATTGCCCAGATGTACTCGGCCATCCAGACCGGTGGTTCCCTGGGTATGCAGACGCTGGACCAGTGCCTG
GAGCGCTTGTTGCAGAAAGGTCTGATCTCCCGCGAGGCTGCGCGGGCCAAGGCGAAGATGCCTGATAACTTCTGA
ATGGATATTACTGAACTGCTTGCCTTTTCGGCCAAACAGGGTGCGTCGGATTTGCACCTGTCTGCCGGTTTGCCCCCAAT
GATTCGTGTCGACGGCGATGTACGCCGGATCAACCTGCCCCCCATGGAGCACAAAGAAGTGCACGGGTTGATCTACGACA
TCATGAACGACAAGCAGCGTAAGGACTACGAAGAGTTCCTGGAAACCGACTTCTCGTTCGAAGTTCCCGGCGTGGCCCGC
TTCCGGGTTAACGCCTTCAACCAGAATCGTGGCGCCGGCGCGGTATTCCGTACCATCCCGTCGAAAGTTCTGACCATGGA
AGATCTGGGCATGGGCCAGGTTTTCAAGGATATTTCTTCCGTGCCTCGTGGTCTGGTACTGGTAACCGGGCCTACCGGTT
CCGGTAAGTCCACCACCCTGGCGGCGATGATGGATTACATCAACGATACCCGCTACGAGCACATCCTCACCATCGAGGAC
CCGATCGAATTCGTGCACGAATCCAAGAAGTGTCTGGTGAACCAGCGGGAAGTGCATCGGGATACCCTGGGCTTTAACGA
AGCCTTGCGTTCGGCCCTGCGGGAAGACCCGGACATCATTCTGGTAGGTGAGCTCCGGGACCTGGAAACCATTCGTCTGG
CACTGACCGCTGCGGAAACCGGCCACCTGGTCTTCGGCACCCTGCACACCACCTCCGCCGCGAAAACCATCGACCGGGTA
GTGGATGTATTCCCTGCGGAAGAAAAGTCCATGGTTCGCTCCATGCTGTCGGAATCACTGCAGGCGGTTATCTCCCAGAC
CCTGATGAAGAAAATGGGCGGCGGCCGTATTGCCGCCCACGAAATCATGATCGGCACCGCCGCCATCCGGAACCTGATCC
GGGAAGACAAGATTGCCCAGATGTACTCGGCCATCCAGACCGGTGGTTCCCTGGGTATGCAGACGCTGGACCAGTGCCTG
GAGCGCTTGTTGCAGAAAGGTCTGATCTCCCGCGAGGCTGCGCGGGCCAAGGCGAAGATGCCTGATAACTTCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Pseudomonas aeruginosa PAK |
90.698 |
100 |
0.907 |
| pilT | Pseudomonas stutzeri DSM 10701 |
90.116 |
100 |
0.901 |
| pilT | Acinetobacter nosocomialis M2 |
83.721 |
100 |
0.837 |
| pilT | Acinetobacter baumannii D1279779 |
83.721 |
100 |
0.837 |
| pilT | Acinetobacter baumannii strain A118 |
83.721 |
100 |
0.837 |
| pilT | Acinetobacter baylyi ADP1 |
81.977 |
100 |
0.82 |
| pilT | Legionella pneumophila strain Lp02 |
76.923 |
98.256 |
0.756 |
| pilT | Legionella pneumophila strain ERS1305867 |
76.923 |
98.256 |
0.756 |
| pilT | Neisseria gonorrhoeae MS11 |
68.235 |
98.837 |
0.674 |
| pilT | Neisseria meningitidis 8013 |
68.235 |
98.837 |
0.674 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
66.471 |
98.837 |
0.657 |
| pilT | Vibrio cholerae strain A1552 |
66.471 |
98.837 |
0.657 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
51.304 |
100 |
0.515 |
| pilU | Pseudomonas stutzeri DSM 10701 |
41.194 |
97.384 |
0.401 |
| pilU | Acinetobacter baylyi ADP1 |
39.306 |
100 |
0.395 |
| pilU | Vibrio cholerae strain A1552 |
40 |
97.384 |
0.39 |