Detailed information
Bioinformatically predicted
Overview
| Name | pilU | Type | Machinery gene |
| Locus tag | OZ656_RS02950 | Genome accession | NZ_CP114373 |
| Coordinates | 643628..644749 (+) | Length | 373 a.a. |
| NCBI ID | WP_011784083.1 | Uniprot ID | A0A1M2USV7 |
| Organism | Marinobacter sp. LM1 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 638628..649749
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OZ656_RS02930 (OZ656_02920) | - | 640303..640887 (-) | 585 | WP_011784079.1 | YggT family protein | - |
| OZ656_RS02935 (OZ656_02925) | proC | 640910..641743 (-) | 834 | WP_113879490.1 | pyrroline-5-carboxylate reductase | - |
| OZ656_RS02940 (OZ656_02930) | - | 641806..642519 (-) | 714 | WP_278350755.1 | YggS family pyridoxal phosphate-dependent enzyme | - |
| OZ656_RS02945 (OZ656_02935) | pilT | 642572..643606 (+) | 1035 | WP_011784082.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| OZ656_RS02950 (OZ656_02940) | pilU | 643628..644749 (+) | 1122 | WP_011784083.1 | PilT/PilU family type 4a pilus ATPase | Machinery gene |
| OZ656_RS02955 (OZ656_02945) | - | 644896..646332 (+) | 1437 | WP_023011731.1 | OmpP1/FadL family transporter | - |
| OZ656_RS02960 (OZ656_02950) | - | 646370..646738 (-) | 369 | WP_278350754.1 | hypothetical protein | - |
| OZ656_RS02965 (OZ656_02955) | polA | 646938..649664 (-) | 2727 | WP_278350753.1 | DNA polymerase I | - |
Sequence
Protein
Download Length: 373 a.a. Molecular weight: 41454.71 Da Isoelectric Point: 6.6617
>NTDB_id=765691 OZ656_RS02950 WP_011784083.1 643628..644749(+) (pilU) [Marinobacter sp. LM1]
MEFEKLLRLMVEKGGSDLFITAGVPPSMKVNGKVLPVTKNALTPEQTREFVYGAMNDKQRAEFEETHECNFAISARGIGR
FRVSAFFQRNLCGMVLRRIEVKIPQIDDLSLPEIIKDLAMTKRGLIMFVGATGTGKSTSLAAMLGHRNRNSRGHIISIED
PIEFVHQHQGCIVTQREVGIDTESFEVALKNTLRQAPDVILIGEVRTRQTMEYSVQFAETGHLCLATLHANNANQALDRI
IQFFPPEQHNQIWMDLSLNLKAIVAQQLVPTPDGKGRKAVIEVLINTPLVADLIRKGEVHKLKELMAKSNESGMQTFDQA
LYKLYAEGSITYEDALAHADSANDLRLMIKLGADAQGADKLSSSVDKLTIQDD
MEFEKLLRLMVEKGGSDLFITAGVPPSMKVNGKVLPVTKNALTPEQTREFVYGAMNDKQRAEFEETHECNFAISARGIGR
FRVSAFFQRNLCGMVLRRIEVKIPQIDDLSLPEIIKDLAMTKRGLIMFVGATGTGKSTSLAAMLGHRNRNSRGHIISIED
PIEFVHQHQGCIVTQREVGIDTESFEVALKNTLRQAPDVILIGEVRTRQTMEYSVQFAETGHLCLATLHANNANQALDRI
IQFFPPEQHNQIWMDLSLNLKAIVAQQLVPTPDGKGRKAVIEVLINTPLVADLIRKGEVHKLKELMAKSNESGMQTFDQA
LYKLYAEGSITYEDALAHADSANDLRLMIKLGADAQGADKLSSSVDKLTIQDD
Nucleotide
Download Length: 1122 bp
>NTDB_id=765691 OZ656_RS02950 WP_011784083.1 643628..644749(+) (pilU) [Marinobacter sp. LM1]
ATGGAATTCGAGAAACTGTTACGGCTGATGGTAGAAAAGGGTGGTTCAGACCTGTTTATCACGGCAGGGGTGCCCCCCAG
CATGAAGGTGAACGGTAAGGTGTTGCCCGTTACCAAGAATGCCCTGACGCCAGAACAGACGCGGGAATTTGTCTACGGCG
CCATGAACGACAAGCAGCGCGCCGAGTTCGAAGAAACCCACGAATGCAACTTTGCCATCAGTGCCCGGGGCATTGGCCGC
TTCCGGGTGTCGGCATTCTTCCAGCGCAACCTTTGCGGCATGGTGCTTCGCCGGATTGAGGTGAAAATCCCCCAGATTGA
CGATCTGTCGCTGCCGGAGATCATCAAGGATCTGGCCATGACCAAGCGTGGCCTGATCATGTTTGTGGGTGCAACCGGTA
CCGGTAAGTCCACCTCGCTGGCGGCCATGCTTGGCCATCGCAACCGCAACAGTCGCGGCCATATCATCTCCATCGAAGAC
CCGATCGAATTCGTGCATCAACACCAGGGCTGTATCGTGACCCAGCGGGAAGTGGGTATTGATACCGAAAGCTTTGAGGT
GGCTCTGAAGAACACTCTGCGGCAGGCGCCGGATGTCATTCTGATTGGTGAGGTGCGGACACGCCAGACCATGGAATACT
CGGTTCAGTTCGCCGAAACCGGCCACCTGTGTCTGGCCACCCTGCACGCCAACAACGCTAACCAGGCGCTGGACCGGATT
ATCCAGTTCTTTCCGCCGGAGCAGCACAACCAGATCTGGATGGATCTGTCTCTGAACCTGAAGGCCATCGTCGCCCAGCA
ACTGGTTCCCACGCCGGACGGCAAGGGGCGTAAGGCGGTTATCGAGGTATTGATCAACACCCCGCTGGTGGCAGACCTGA
TCCGCAAGGGCGAAGTGCACAAACTCAAAGAGCTGATGGCAAAATCGAACGAGTCTGGCATGCAGACCTTCGATCAGGCT
CTGTACAAACTGTATGCCGAGGGTTCCATCACCTACGAAGATGCCCTTGCGCACGCAGATTCCGCCAACGATCTGCGCCT
GATGATCAAGCTGGGTGCCGACGCCCAGGGTGCAGACAAGCTGTCTTCCTCCGTCGACAAACTCACCATTCAGGACGACT
GA
ATGGAATTCGAGAAACTGTTACGGCTGATGGTAGAAAAGGGTGGTTCAGACCTGTTTATCACGGCAGGGGTGCCCCCCAG
CATGAAGGTGAACGGTAAGGTGTTGCCCGTTACCAAGAATGCCCTGACGCCAGAACAGACGCGGGAATTTGTCTACGGCG
CCATGAACGACAAGCAGCGCGCCGAGTTCGAAGAAACCCACGAATGCAACTTTGCCATCAGTGCCCGGGGCATTGGCCGC
TTCCGGGTGTCGGCATTCTTCCAGCGCAACCTTTGCGGCATGGTGCTTCGCCGGATTGAGGTGAAAATCCCCCAGATTGA
CGATCTGTCGCTGCCGGAGATCATCAAGGATCTGGCCATGACCAAGCGTGGCCTGATCATGTTTGTGGGTGCAACCGGTA
CCGGTAAGTCCACCTCGCTGGCGGCCATGCTTGGCCATCGCAACCGCAACAGTCGCGGCCATATCATCTCCATCGAAGAC
CCGATCGAATTCGTGCATCAACACCAGGGCTGTATCGTGACCCAGCGGGAAGTGGGTATTGATACCGAAAGCTTTGAGGT
GGCTCTGAAGAACACTCTGCGGCAGGCGCCGGATGTCATTCTGATTGGTGAGGTGCGGACACGCCAGACCATGGAATACT
CGGTTCAGTTCGCCGAAACCGGCCACCTGTGTCTGGCCACCCTGCACGCCAACAACGCTAACCAGGCGCTGGACCGGATT
ATCCAGTTCTTTCCGCCGGAGCAGCACAACCAGATCTGGATGGATCTGTCTCTGAACCTGAAGGCCATCGTCGCCCAGCA
ACTGGTTCCCACGCCGGACGGCAAGGGGCGTAAGGCGGTTATCGAGGTATTGATCAACACCCCGCTGGTGGCAGACCTGA
TCCGCAAGGGCGAAGTGCACAAACTCAAAGAGCTGATGGCAAAATCGAACGAGTCTGGCATGCAGACCTTCGATCAGGCT
CTGTACAAACTGTATGCCGAGGGTTCCATCACCTACGAAGATGCCCTTGCGCACGCAGATTCCGCCAACGATCTGCGCCT
GATGATCAAGCTGGGTGCCGACGCCCAGGGTGCAGACAAGCTGTCTTCCTCCGTCGACAAACTCACCATTCAGGACGACT
GA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilU | Pseudomonas stutzeri DSM 10701 |
79.515 |
99.464 |
0.791 |
| pilU | Acinetobacter baylyi ADP1 |
65.169 |
95.442 |
0.622 |
| pilU | Vibrio cholerae strain A1552 |
57.297 |
99.196 |
0.568 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
42.773 |
90.885 |
0.389 |
| pilT | Acinetobacter baumannii D1279779 |
41.194 |
89.812 |
0.37 |
| pilT | Acinetobacter baumannii strain A118 |
41.194 |
89.812 |
0.37 |
| pilT | Acinetobacter nosocomialis M2 |
40.896 |
89.812 |
0.367 |
| pilT | Pseudomonas aeruginosa PAK |
40.597 |
89.812 |
0.365 |
| pilT | Pseudomonas stutzeri DSM 10701 |
40.299 |
89.812 |
0.362 |
| pilT | Legionella pneumophila strain Lp02 |
40.299 |
89.812 |
0.362 |
| pilT | Legionella pneumophila strain ERS1305867 |
40.299 |
89.812 |
0.362 |
| pilT | Acinetobacter baylyi ADP1 |
39.589 |
91.421 |
0.362 |