Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | QMY08_RS10945 | Genome accession | NZ_CP125889 |
| Coordinates | 2114872..2115852 (-) | Length | 326 a.a. |
| NCBI ID | WP_001055633.1 | Uniprot ID | - |
| Organism | Escherichia coli strain EPSSH018 | ||
| Function | power the assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2109872..2120852
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QMY08_RS10915 (QMY08_10875) | yggI | 2110535..2111032 (+) | 498 | WP_000858396.1 | SprT family zinc-dependent metalloprotease | - |
| QMY08_RS10920 (QMY08_10880) | endA | 2111127..2111834 (+) | 708 | WP_000286500.1 | deoxyribonuclease I | - |
| QMY08_RS10925 (QMY08_10885) | rsmE | 2111914..2112645 (+) | 732 | WP_001222508.1 | 16S rRNA (uracil(1498)-N(3))-methyltransferase | - |
| QMY08_RS10930 (QMY08_10890) | gshB | 2112658..2113608 (+) | 951 | WP_000593273.1 | glutathione synthase | - |
| QMY08_RS10935 (QMY08_10895) | yqgE | 2113717..2114280 (+) | 564 | WP_001053178.1 | YqgE/AlgH family protein | - |
| QMY08_RS10940 (QMY08_10900) | ruvX | 2114280..2114696 (+) | 417 | WP_000017111.1 | Holliday junction resolvase RuvX | - |
| QMY08_RS10945 (QMY08_10905) | pilT | 2114872..2115852 (-) | 981 | WP_001055633.1 | PilT/PilU family type 4a pilus ATPase | Machinery gene |
| QMY08_RS10950 (QMY08_10910) | yggS | 2115870..2116574 (+) | 705 | WP_000997795.1 | pyridoxal phosphate homeostasis protein | - |
| QMY08_RS10955 (QMY08_10915) | yggT | 2116592..2117158 (+) | 567 | WP_001094831.1 | osmotic shock tolerance protein YggT | - |
| QMY08_RS10960 (QMY08_10920) | yggU | 2117155..2117445 (+) | 291 | WP_001277222.1 | DUF167 family protein YggU | - |
| QMY08_RS10965 (QMY08_10925) | rdgB | 2117453..2118046 (+) | 594 | WP_001174743.1 | XTP/dITP diphosphatase | - |
| QMY08_RS10970 (QMY08_10930) | hemW | 2118039..2119175 (+) | 1137 | WP_000239919.1 | radical SAM family heme chaperone HemW | - |
| QMY08_RS10975 (QMY08_10935) | - | 2119445..2120641 (+) | 1197 | WP_309597996.1 | IS110-like element ISEc20 family transposase | - |
Sequence
Protein
Download Length: 326 a.a. Molecular weight: 35893.04 Da Isoelectric Point: 5.5860
>NTDB_id=764931 QMY08_RS10945 WP_001055633.1 2114872..2115852(-) (pilT) [Escherichia coli strain EPSSH018]
MNMEEIVALSVKHNVSDLHLCSAWSARWRIRGLMEAAPFDAPDVEELLREWLDDDQRAILLENGQLDFAVSLAENQRLRG
SAFAQRQGISLALRLLPSHCPQLEQLGAPTVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVE
YIYASQRCLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDS
FPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVGMLTFQQSYQQR
VGEGRL
MNMEEIVALSVKHNVSDLHLCSAWSARWRIRGLMEAAPFDAPDVEELLREWLDDDQRAILLENGQLDFAVSLAENQRLRG
SAFAQRQGISLALRLLPSHCPQLEQLGAPTVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVE
YIYASQRCLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDS
FPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVGMLTFQQSYQQR
VGEGRL
Nucleotide
Download Length: 981 bp
>NTDB_id=764931 QMY08_RS10945 WP_001055633.1 2114872..2115852(-) (pilT) [Escherichia coli strain EPSSH018]
ATGAATATGGAAGAAATTGTGGCCCTTAGTGTAAAGCATAACGTCTCGGATCTACACCTGTGCAGCGCCTGGTCCGCACG
ATGGCGCATTCGCGGGCTAATGGAAGCTGCGCCGTTTGATGCGCCGGACGTCGAAGAGCTACTGCGGGAGTGGCTGGATG
ACGATCAGCGGGCAATATTGCTGGAAAATGGCCAGCTGGATTTTGCCGTGTCGCTGGCGGAAAACCAGCGGTTGCGTGGC
AGTGCGTTCGCGCAACGGCAAGGTATTTCTCTGGCATTACGGTTGTTACCTTCGCACTGTCCACAGCTCGAACAGCTTGG
CGCACCAACGGTATTGCCGGAATTACTCAAGAGCGAGAATGGCCTGATTCTGGTGACGGGGGCGACGGGGAGCGGCAAAT
CTACCACGCTGGCGGCGATGGTTGGCTATCTCAATCAACATGCCGATGCGCATATTCTGACGCTGGAAGATCCTGTTGAA
TATATCTATGCCAGCCAGCGATGTTTGATCCAGCAGCGGGAAATTGGTTTGCACTGTATGACGTTCGCATCGGGATTGCG
GGCCGCATTGCGGGAAGATCCTGATGTGATTTTGCTCGGAGAGCTGCGTGACAGCGAGACAATCCGTCTGGCACTGACGG
CGGCAGAAACCGGGCATTTGGTGCTGGCAACATTACATACGCGTGGTGCCGCGCAGGCAGTTGAGCGACTGGTGGATTCA
TTTCCGGCGCAGGAAAAAGATCCCGTACGTAATCAACTGGCAGGTAGTTTACGGGCCGTGTTGTCACAAAAGCTGGAAGT
GGATAAACAGGAAGGACGCGTGGCGCTGTTTGAATTATTGATTAACACTCCCGCGGTGGGGAATTTGATTCGCGAAGGGA
AAACCCACCAGTTACCGCATGTTATTCAAACCGGGCAGCAGGTGGGGATGTTAACGTTTCAGCAGAGTTATCAGCAGCGG
GTGGGGGAAGGGCGTTTGTGA
ATGAATATGGAAGAAATTGTGGCCCTTAGTGTAAAGCATAACGTCTCGGATCTACACCTGTGCAGCGCCTGGTCCGCACG
ATGGCGCATTCGCGGGCTAATGGAAGCTGCGCCGTTTGATGCGCCGGACGTCGAAGAGCTACTGCGGGAGTGGCTGGATG
ACGATCAGCGGGCAATATTGCTGGAAAATGGCCAGCTGGATTTTGCCGTGTCGCTGGCGGAAAACCAGCGGTTGCGTGGC
AGTGCGTTCGCGCAACGGCAAGGTATTTCTCTGGCATTACGGTTGTTACCTTCGCACTGTCCACAGCTCGAACAGCTTGG
CGCACCAACGGTATTGCCGGAATTACTCAAGAGCGAGAATGGCCTGATTCTGGTGACGGGGGCGACGGGGAGCGGCAAAT
CTACCACGCTGGCGGCGATGGTTGGCTATCTCAATCAACATGCCGATGCGCATATTCTGACGCTGGAAGATCCTGTTGAA
TATATCTATGCCAGCCAGCGATGTTTGATCCAGCAGCGGGAAATTGGTTTGCACTGTATGACGTTCGCATCGGGATTGCG
GGCCGCATTGCGGGAAGATCCTGATGTGATTTTGCTCGGAGAGCTGCGTGACAGCGAGACAATCCGTCTGGCACTGACGG
CGGCAGAAACCGGGCATTTGGTGCTGGCAACATTACATACGCGTGGTGCCGCGCAGGCAGTTGAGCGACTGGTGGATTCA
TTTCCGGCGCAGGAAAAAGATCCCGTACGTAATCAACTGGCAGGTAGTTTACGGGCCGTGTTGTCACAAAAGCTGGAAGT
GGATAAACAGGAAGGACGCGTGGCGCTGTTTGAATTATTGATTAACACTCCCGCGGTGGGGAATTTGATTCGCGAAGGGA
AAACCCACCAGTTACCGCATGTTATTCAAACCGGGCAGCAGGTGGGGATGTTAACGTTTCAGCAGAGTTATCAGCAGCGG
GTGGGGGAAGGGCGTTTGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.