Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | OTJ99_RS04140 | Genome accession | NZ_CP113864 |
| Coordinates | 873100..874155 (+) | Length | 351 a.a. |
| NCBI ID | WP_045165113.1 | Uniprot ID | - |
| Organism | Caldicellulosiruptor naganoensis strain DSM 8991 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 868100..879155
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OTJ99_RS04130 (OTJ99_000827) | - | 868115..871306 (+) | 3192 | WP_045165115.1 | response regulator | - |
| OTJ99_RS04135 (OTJ99_000828) | - | 871334..873046 (+) | 1713 | WP_083943510.1 | GspE/PulE family protein | - |
| OTJ99_RS04140 (OTJ99_000829) | pilT | 873100..874155 (+) | 1056 | WP_045165113.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| OTJ99_RS04145 (OTJ99_000830) | - | 874226..875437 (+) | 1212 | WP_045165112.1 | type II secretion system F family protein | - |
| OTJ99_RS04150 (OTJ99_000831) | - | 875477..875893 (+) | 417 | WP_045165111.1 | type II secretion system protein | - |
| OTJ99_RS04155 (OTJ99_000832) | - | 875927..876364 (+) | 438 | WP_045165110.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | - |
| OTJ99_RS04160 (OTJ99_000833) | - | 876411..877187 (+) | 777 | WP_045165109.1 | A24 family peptidase | - |
| OTJ99_RS04165 (OTJ99_000834) | - | 877195..877485 (+) | 291 | WP_045165108.1 | late competence development ComFB family protein | - |
| OTJ99_RS04170 (OTJ99_000835) | - | 877475..878029 (+) | 555 | WP_045165107.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | - |
| OTJ99_RS04175 (OTJ99_000836) | - | 878026..878598 (+) | 573 | WP_045165106.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | - |
Sequence
Protein
Download Length: 351 a.a. Molecular weight: 39605.72 Da Isoelectric Point: 7.2522
>NTDB_id=763289 OTJ99_RS04140 WP_045165113.1 873100..874155(+) (pilT) [Caldicellulosiruptor naganoensis strain DSM 8991]
MDINSILKEAFLKEASDIHITPGVPPIYRIHGRLVRADDSILTPEMVEEFVRQITNENQFKILEQKGEIDFSYGIKGVSR
FRVNVYKQRGSYSIAFRIIPVNIPPFETLGLPPVLKEFTKLNKGLVLVTGPTGSGKSTTLASLIDIINKERDVHIITLED
PIEYLHRHNKSIINQREIGSDTLSFADALRAALREDPDVILVGEMRDLETIAIALTAAETGHLVFSTLHTIGAAKTIDRI
IDVFPPHQQQQIRIQLSTVLQGVVSQQLLTRRDGKGRVVATEVMIVNPAIRNLIREAKTYQIQSIIQTHQRQGMITMEQS
LIDLYKRGLITREDAFNYATDFDFMQRLLSA
MDINSILKEAFLKEASDIHITPGVPPIYRIHGRLVRADDSILTPEMVEEFVRQITNENQFKILEQKGEIDFSYGIKGVSR
FRVNVYKQRGSYSIAFRIIPVNIPPFETLGLPPVLKEFTKLNKGLVLVTGPTGSGKSTTLASLIDIINKERDVHIITLED
PIEYLHRHNKSIINQREIGSDTLSFADALRAALREDPDVILVGEMRDLETIAIALTAAETGHLVFSTLHTIGAAKTIDRI
IDVFPPHQQQQIRIQLSTVLQGVVSQQLLTRRDGKGRVVATEVMIVNPAIRNLIREAKTYQIQSIIQTHQRQGMITMEQS
LIDLYKRGLITREDAFNYATDFDFMQRLLSA
Nucleotide
Download Length: 1056 bp
>NTDB_id=763289 OTJ99_RS04140 WP_045165113.1 873100..874155(+) (pilT) [Caldicellulosiruptor naganoensis strain DSM 8991]
ATGGATATTAATTCAATTCTCAAAGAAGCATTTCTCAAGGAGGCATCAGATATACATATTACACCAGGTGTTCCTCCAAT
TTATCGAATACACGGCAGATTAGTACGGGCAGACGATTCAATTTTGACGCCTGAAATGGTAGAGGAGTTTGTGCGACAGA
TCACCAACGAAAACCAGTTTAAAATTCTTGAGCAGAAAGGTGAGATAGACTTTTCTTACGGCATAAAAGGCGTAAGCAGA
TTCAGAGTAAATGTTTATAAACAAAGAGGTTCATATTCTATAGCTTTTAGAATAATTCCAGTAAATATACCACCATTTGA
GACACTTGGCCTTCCACCGGTATTGAAGGAATTTACAAAGTTGAACAAAGGACTTGTTTTAGTTACAGGTCCAACTGGTT
CAGGAAAATCCACAACTCTGGCATCATTGATTGATATAATCAATAAAGAAAGAGATGTACATATAATAACCTTGGAGGAT
CCAATAGAGTATTTGCATAGACACAACAAGAGTATTATCAATCAAAGAGAGATAGGTAGTGACACACTCAGCTTTGCAGA
TGCGCTGAGGGCGGCTTTGAGAGAAGATCCTGATGTAATCCTGGTTGGTGAGATGAGGGATTTGGAGACAATTGCGATAG
CTTTAACAGCTGCTGAAACAGGACACCTGGTGTTTTCCACACTTCACACAATTGGAGCGGCAAAGACAATAGACCGTATC
ATTGACGTTTTTCCACCCCATCAACAGCAGCAGATAAGAATTCAGCTATCAACAGTTTTGCAGGGAGTTGTTTCTCAGCA
ACTTTTGACCCGTCGAGATGGTAAAGGTAGAGTTGTTGCGACAGAGGTAATGATAGTTAATCCAGCAATAAGAAACCTCA
TTAGGGAGGCTAAAACATATCAGATTCAATCAATTATTCAAACGCATCAGCGACAGGGCATGATAACAATGGAGCAGTCA
CTCATAGACTTGTACAAACGAGGTCTTATCACCCGTGAAGATGCGTTCAACTATGCTACTGATTTTGATTTTATGCAAAG
ACTACTCAGTGCATAA
ATGGATATTAATTCAATTCTCAAAGAAGCATTTCTCAAGGAGGCATCAGATATACATATTACACCAGGTGTTCCTCCAAT
TTATCGAATACACGGCAGATTAGTACGGGCAGACGATTCAATTTTGACGCCTGAAATGGTAGAGGAGTTTGTGCGACAGA
TCACCAACGAAAACCAGTTTAAAATTCTTGAGCAGAAAGGTGAGATAGACTTTTCTTACGGCATAAAAGGCGTAAGCAGA
TTCAGAGTAAATGTTTATAAACAAAGAGGTTCATATTCTATAGCTTTTAGAATAATTCCAGTAAATATACCACCATTTGA
GACACTTGGCCTTCCACCGGTATTGAAGGAATTTACAAAGTTGAACAAAGGACTTGTTTTAGTTACAGGTCCAACTGGTT
CAGGAAAATCCACAACTCTGGCATCATTGATTGATATAATCAATAAAGAAAGAGATGTACATATAATAACCTTGGAGGAT
CCAATAGAGTATTTGCATAGACACAACAAGAGTATTATCAATCAAAGAGAGATAGGTAGTGACACACTCAGCTTTGCAGA
TGCGCTGAGGGCGGCTTTGAGAGAAGATCCTGATGTAATCCTGGTTGGTGAGATGAGGGATTTGGAGACAATTGCGATAG
CTTTAACAGCTGCTGAAACAGGACACCTGGTGTTTTCCACACTTCACACAATTGGAGCGGCAAAGACAATAGACCGTATC
ATTGACGTTTTTCCACCCCATCAACAGCAGCAGATAAGAATTCAGCTATCAACAGTTTTGCAGGGAGTTGTTTCTCAGCA
ACTTTTGACCCGTCGAGATGGTAAAGGTAGAGTTGTTGCGACAGAGGTAATGATAGTTAATCCAGCAATAAGAAACCTCA
TTAGGGAGGCTAAAACATATCAGATTCAATCAATTATTCAAACGCATCAGCGACAGGGCATGATAACAATGGAGCAGTCA
CTCATAGACTTGTACAAACGAGGTCTTATCACCCGTGAAGATGCGTTCAACTATGCTACTGATTTTGATTTTATGCAAAG
ACTACTCAGTGCATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.