Detailed information NTG0075738

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: F7G23_RS24815
• Genome accession: NZ_AP024921
• Coordinates: 4910387..4911412 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli O145:H28 strain 12E115
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4905387..4916412

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
F7G23_RS24790 (EC12E115_4765)	rraA	4905801..4906286 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
F7G23_RS24795 (EC12E115_4766)	menA	4906379..4907305 (-)	927	WP_001308187.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
F7G23_RS24800 (EC12E115_4767)	hslU	4907372..4908703 (-)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
F7G23_RS24805 (EC12E115_4768)	hslV	4908713..4909243 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
F7G23_RS24810 (EC12E115_4769)	ftsN	4909336..4910295 (-)	960	WP_000068838.1	cell division protein FtsN	-
F7G23_RS24815 (EC12E115_4770)	cytR	4910387..4911412 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
F7G23_RS24820 (EC12E115_4771)	priA	4911568..4913766 (-)	2199	WP_001400571.1	primosomal protein N'	Machinery gene
F7G23_RS24825 (EC12E115_4772)	rpmE	4913969..4914181 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
F7G23_RS24830 (EC12E115_4773)	yiiX	4914242..4914850 (-)	609	WP_000702305.1	YiiX family permuted papain-like enzyme	-
F7G23_RS24835 (EC12E115_4774)	metJ	4914910..4915227 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=75738 F7G23_RS24815 WP_000644904.1 4910387..4911412(-) (cytR) [Escherichia coli O145:H28 strain 12E115]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=75738 F7G23_RS24815 WP_000644904.1 4910387..4911412(-) (cytR) [Escherichia coli O145:H28 strain 12E115]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCTCTGTGTCACTACCGCCTGCAAGGCTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCAGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGCCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628