Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | LJ360_RS16575 | Genome accession | NZ_CP110342 |
| Coordinates | 3579883..3580917 (-) | Length | 344 a.a. |
| NCBI ID | WP_091852634.1 | Uniprot ID | A0A1I0FBT8 |
| Organism | Marinobacter sp. AN1 | ||
| Function | type IV pilus retraction (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3574883..3585917
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LJ360_RS16555 (LJ360_16555) | - | 3574904..3575248 (-) | 345 | WP_091852625.1 | DUF2782 domain-containing protein | - |
| LJ360_RS16560 (LJ360_16560) | polA | 3575347..3578067 (+) | 2721 | WP_091852628.1 | DNA polymerase I | - |
| LJ360_RS16565 (LJ360_16565) | - | 3578271..3578630 (+) | 360 | WP_091852814.1 | hypothetical protein | - |
| LJ360_RS16570 (LJ360_16570) | pilU | 3578689..3579810 (-) | 1122 | WP_091852631.1 | PilT/PilU family type 4a pilus ATPase | Machinery gene |
| LJ360_RS16575 (LJ360_16575) | pilT | 3579883..3580917 (-) | 1035 | WP_091852634.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| LJ360_RS16580 (LJ360_16580) | - | 3581028..3581732 (+) | 705 | WP_091852636.1 | YggS family pyridoxal phosphate-dependent enzyme | - |
| LJ360_RS16585 (LJ360_16585) | proC | 3581853..3582689 (+) | 837 | WP_091852638.1 | pyrroline-5-carboxylate reductase | - |
| LJ360_RS16590 (LJ360_16590) | - | 3582733..3583302 (+) | 570 | WP_091852641.1 | YggT family protein | - |
| LJ360_RS16595 (LJ360_16595) | - | 3583518..3585482 (+) | 1965 | WP_091852644.1 | dynamin family protein | - |
Sequence
Protein
Download Length: 344 a.a. Molecular weight: 38019.75 Da Isoelectric Point: 6.4200
>NTDB_id=754144 LJ360_RS16575 WP_091852634.1 3579883..3580917(-) (pilT) [Marinobacter sp. AN1]
MDITELLAFSAKQGASDLHLSAGLPPMIRVDGDVRRINLPPMEHKEVHGLIYDIMNDKQRKDYEEFLETDFSFEVPGVAR
FRVNAFNQNRGAGAVFRTIPSKVLTMEDLGMGQVFKDIASVPRGLVLVTGPTGSGKSTTLAAMLDYINDSRYEHVLTIED
PIEFVHESKKCLVNQREVHRDTLGFNEALRSALREDPDIILVGELRDLETIRLALTAAETGHLVFGTLHTTSAAKTIDRV
VDVFPAEEKSMVRSMLSESLQAVVSQTLMKKMGGGRIAAHEIMIGTAAIRNLIREDKVAQMYSAIQTGGSLGMQTLDQCL
QRLLQKGLISREAARAKAKIPDNF
MDITELLAFSAKQGASDLHLSAGLPPMIRVDGDVRRINLPPMEHKEVHGLIYDIMNDKQRKDYEEFLETDFSFEVPGVAR
FRVNAFNQNRGAGAVFRTIPSKVLTMEDLGMGQVFKDIASVPRGLVLVTGPTGSGKSTTLAAMLDYINDSRYEHVLTIED
PIEFVHESKKCLVNQREVHRDTLGFNEALRSALREDPDIILVGELRDLETIRLALTAAETGHLVFGTLHTTSAAKTIDRV
VDVFPAEEKSMVRSMLSESLQAVVSQTLMKKMGGGRIAAHEIMIGTAAIRNLIREDKVAQMYSAIQTGGSLGMQTLDQCL
QRLLQKGLISREAARAKAKIPDNF
Nucleotide
Download Length: 1035 bp
>NTDB_id=754144 LJ360_RS16575 WP_091852634.1 3579883..3580917(-) (pilT) [Marinobacter sp. AN1]
ATGGATATTACCGAACTTCTGGCCTTCTCGGCCAAACAGGGCGCGTCTGACCTGCACCTGTCCGCCGGGCTGCCACCCAT
GATTCGTGTCGATGGCGATGTGCGCCGGATCAACCTTCCGCCCATGGAGCATAAGGAAGTCCACGGACTGATCTATGACA
TCATGAACGACAAGCAGCGGAAGGATTACGAGGAGTTCCTGGAAACCGACTTTTCCTTCGAAGTGCCCGGTGTCGCTCGC
TTCCGGGTTAACGCCTTCAATCAGAACCGCGGTGCCGGTGCGGTTTTCCGTACCATCCCCTCGAAAGTCCTTACCATGGA
AGATCTGGGCATGGGCCAGGTTTTCAAGGATATCGCTTCCGTGCCCCGCGGGCTGGTACTGGTCACCGGGCCCACAGGCT
CGGGTAAGTCCACGACGCTGGCGGCCATGCTCGACTACATCAACGACAGCCGCTACGAGCACGTGCTGACCATCGAGGAC
CCCATCGAATTTGTCCACGAATCCAAGAAGTGCCTGGTGAACCAGCGGGAAGTGCACCGGGACACCCTCGGTTTTAACGA
GGCCTTACGCTCGGCCCTGCGGGAAGACCCCGACATCATCCTGGTGGGTGAGCTGCGGGACCTGGAGACCATTCGCCTGG
CCCTGACCGCAGCAGAAACCGGTCACCTGGTGTTTGGCACCCTGCATACTACCTCCGCGGCCAAGACCATTGACCGGGTG
GTGGATGTGTTCCCGGCGGAAGAGAAATCCATGGTCCGCTCCATGCTCTCCGAGTCCCTGCAGGCCGTGGTTTCCCAGAC
CCTGATGAAAAAAATGGGCGGCGGCCGGATAGCGGCGCATGAAATCATGATCGGTACCGCAGCAATTCGTAACCTGATCC
GCGAAGATAAGGTCGCCCAGATGTACTCCGCCATCCAGACCGGTGGCTCCCTGGGTATGCAGACCCTGGATCAGTGCCTG
CAACGGCTCTTGCAGAAGGGTCTGATCAGCCGCGAGGCGGCCCGGGCCAAGGCCAAGATTCCCGACAACTTCTGA
ATGGATATTACCGAACTTCTGGCCTTCTCGGCCAAACAGGGCGCGTCTGACCTGCACCTGTCCGCCGGGCTGCCACCCAT
GATTCGTGTCGATGGCGATGTGCGCCGGATCAACCTTCCGCCCATGGAGCATAAGGAAGTCCACGGACTGATCTATGACA
TCATGAACGACAAGCAGCGGAAGGATTACGAGGAGTTCCTGGAAACCGACTTTTCCTTCGAAGTGCCCGGTGTCGCTCGC
TTCCGGGTTAACGCCTTCAATCAGAACCGCGGTGCCGGTGCGGTTTTCCGTACCATCCCCTCGAAAGTCCTTACCATGGA
AGATCTGGGCATGGGCCAGGTTTTCAAGGATATCGCTTCCGTGCCCCGCGGGCTGGTACTGGTCACCGGGCCCACAGGCT
CGGGTAAGTCCACGACGCTGGCGGCCATGCTCGACTACATCAACGACAGCCGCTACGAGCACGTGCTGACCATCGAGGAC
CCCATCGAATTTGTCCACGAATCCAAGAAGTGCCTGGTGAACCAGCGGGAAGTGCACCGGGACACCCTCGGTTTTAACGA
GGCCTTACGCTCGGCCCTGCGGGAAGACCCCGACATCATCCTGGTGGGTGAGCTGCGGGACCTGGAGACCATTCGCCTGG
CCCTGACCGCAGCAGAAACCGGTCACCTGGTGTTTGGCACCCTGCATACTACCTCCGCGGCCAAGACCATTGACCGGGTG
GTGGATGTGTTCCCGGCGGAAGAGAAATCCATGGTCCGCTCCATGCTCTCCGAGTCCCTGCAGGCCGTGGTTTCCCAGAC
CCTGATGAAAAAAATGGGCGGCGGCCGGATAGCGGCGCATGAAATCATGATCGGTACCGCAGCAATTCGTAACCTGATCC
GCGAAGATAAGGTCGCCCAGATGTACTCCGCCATCCAGACCGGTGGCTCCCTGGGTATGCAGACCCTGGATCAGTGCCTG
CAACGGCTCTTGCAGAAGGGTCTGATCAGCCGCGAGGCGGCCCGGGCCAAGGCCAAGATTCCCGACAACTTCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Pseudomonas aeruginosa PAK |
90.407 |
100 |
0.904 |
| pilT | Pseudomonas stutzeri DSM 10701 |
89.826 |
100 |
0.898 |
| pilT | Acinetobacter nosocomialis M2 |
83.721 |
100 |
0.837 |
| pilT | Acinetobacter baumannii D1279779 |
83.721 |
100 |
0.837 |
| pilT | Acinetobacter baumannii strain A118 |
83.721 |
100 |
0.837 |
| pilT | Acinetobacter baylyi ADP1 |
81.977 |
100 |
0.82 |
| pilT | Legionella pneumophila strain Lp02 |
77.219 |
98.256 |
0.759 |
| pilT | Legionella pneumophila strain ERS1305867 |
77.219 |
98.256 |
0.759 |
| pilT | Neisseria gonorrhoeae MS11 |
67.647 |
98.837 |
0.669 |
| pilT | Neisseria meningitidis 8013 |
67.647 |
98.837 |
0.669 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
66.471 |
98.837 |
0.657 |
| pilT | Vibrio cholerae strain A1552 |
66.471 |
98.837 |
0.657 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
51.014 |
100 |
0.512 |
| pilU | Pseudomonas stutzeri DSM 10701 |
41.791 |
97.384 |
0.407 |
| pilU | Acinetobacter baylyi ADP1 |
38.728 |
100 |
0.39 |
| pilU | Vibrio cholerae strain A1552 |
39.701 |
97.384 |
0.387 |