Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | QDX06_RS04145 | Genome accession | NZ_CP122872 |
| Coordinates | 860619..861599 (+) | Length | 326 a.a. |
| NCBI ID | WP_001295381.1 | Uniprot ID | - |
| Organism | Escherichia coli strain ETEC1718 | ||
| Function | power the assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 855619..866599
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QDX06_RS04115 (QDX06_04115) | yggM | 856134..857141 (+) | 1008 | WP_000745217.1 | DUF1202 family protein | - |
| QDX06_RS04120 (QDX06_04120) | hemW | 857296..858432 (-) | 1137 | WP_000239928.1 | radical SAM family heme chaperone HemW | - |
| QDX06_RS04125 (QDX06_04125) | rdgB | 858425..859018 (-) | 594 | WP_001174735.1 | XTP/dITP diphosphatase | - |
| QDX06_RS04130 (QDX06_04130) | yggU | 859026..859316 (-) | 291 | WP_001277222.1 | DUF167 family protein YggU | - |
| QDX06_RS04135 (QDX06_04135) | yggT | 859313..859879 (-) | 567 | WP_001094831.1 | osmotic shock tolerance protein YggT | - |
| QDX06_RS04140 (QDX06_04140) | yggS | 859897..860601 (-) | 705 | WP_000997795.1 | pyridoxal phosphate homeostasis protein | - |
| QDX06_RS04145 (QDX06_04145) | pilT | 860619..861599 (+) | 981 | WP_001295381.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| QDX06_RS04150 (QDX06_04150) | - | 861648..861776 (+) | 129 | WP_001278270.1 | hypothetical protein | - |
| QDX06_RS04155 (QDX06_04155) | ruvX | 861783..862199 (-) | 417 | WP_000017106.1 | Holliday junction resolvase RuvX | - |
| QDX06_RS04160 (QDX06_04160) | yqgE | 862199..862762 (-) | 564 | WP_001053178.1 | YqgE/AlgH family protein | - |
| QDX06_RS04165 (QDX06_04165) | gshB | 862871..863821 (-) | 951 | WP_000593273.1 | glutathione synthase | - |
| QDX06_RS04170 (QDX06_04170) | rsmE | 863834..864565 (-) | 732 | WP_032187617.1 | 16S rRNA (uracil(1498)-N(3))-methyltransferase | - |
| QDX06_RS04175 (QDX06_04175) | endA | 864645..865352 (-) | 708 | WP_000286500.1 | deoxyribonuclease I | - |
| QDX06_RS04180 (QDX06_04180) | yggI | 865447..865944 (-) | 498 | WP_001300769.1 | SprT family zinc-dependent metalloprotease | - |
Sequence
Protein
Download Length: 326 a.a. Molecular weight: 35926.14 Da Isoelectric Point: 5.7654
>NTDB_id=743578 QDX06_RS04145 WP_001295381.1 860619..861599(+) (pilT) [Escherichia coli strain ETEC1718]
MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGLMEAAPFDAPDVEELLREWLDDDQRAILLENGQLDFAVSLAENQRLRG
SAFAQRQGISLALRLLPSHCPQLEQLGAPPVLPELLKSENGMILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVE
YLYASQRCLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDS
FPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVGMITFQQSYQHR
VGEGRL
MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGLMEAAPFDAPDVEELLREWLDDDQRAILLENGQLDFAVSLAENQRLRG
SAFAQRQGISLALRLLPSHCPQLEQLGAPPVLPELLKSENGMILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVE
YLYASQRCLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDS
FPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVGMITFQQSYQHR
VGEGRL
Nucleotide
Download Length: 981 bp
>NTDB_id=743578 QDX06_RS04145 WP_001295381.1 860619..861599(+) (pilT) [Escherichia coli strain ETEC1718]
ATGAATATGGAAGAAATTGTGGCCCTTAGTGTAAAGCATAACGTCTCGGATCTACACCTGTGCAGCGCCTGGCCCGCACG
ATGGCGCATTCGCGGGCTAATGGAAGCTGCGCCGTTTGATGCGCCGGACGTCGAAGAGCTACTGCGGGAGTGGCTGGATG
ACGATCAGCGGGCAATATTGCTGGAAAATGGCCAGCTGGATTTTGCCGTGTCGCTGGCGGAAAACCAGCGGTTGCGTGGC
AGTGCGTTCGCGCAACGGCAAGGTATTTCTCTGGCATTACGGTTGTTACCTTCGCACTGTCCACAGCTCGAACAGCTTGG
TGCGCCACCGGTATTGCCGGAATTACTCAAGAGCGAGAATGGCATGATTCTGGTGACGGGGGCGACGGGGAGTGGCAAAT
CTACCACGCTGGCGGCGATGGTTGGCTATCTTAATCAACATGCCGATGCGCATATTCTGACGCTGGAAGATCCTGTGGAA
TATCTCTATGCCAGCCAGCGATGTTTGATCCAGCAGCGGGAAATTGGTTTGCACTGTATGACGTTCGCATCGGGGTTGCG
GGCCGCATTGCGGGAAGATCCTGATGTGATTTTGCTCGGAGAGCTACGTGACAGTGAGACAATCCGTCTGGCGCTGACGG
CGGCAGAAACCGGGCATCTGGTGCTGGCAACCTTACATACACGTGGTGCCGCGCAGGCAGTTGAGCGACTGGTGGATTCA
TTTCCGGCGCAGGAAAAAGACCCCGTGCGTAATCAACTGGCAGGTAGTTTACGGGCAGTGCTGTCACAAAAGCTGGAAGT
GGATAAACAGGAAGGACGCGTGGCGCTATTTGAATTGCTGATTAACACACCCGCGGTGGGGAATTTGATTCGTGAAGGGA
AAACCCACCAGTTACCGCATGTTATTCAAACCGGGCAGCAGGTGGGGATGATAACGTTTCAGCAGAGTTATCAGCACCGG
GTGGGGGAAGGGCGTTTGTGA
ATGAATATGGAAGAAATTGTGGCCCTTAGTGTAAAGCATAACGTCTCGGATCTACACCTGTGCAGCGCCTGGCCCGCACG
ATGGCGCATTCGCGGGCTAATGGAAGCTGCGCCGTTTGATGCGCCGGACGTCGAAGAGCTACTGCGGGAGTGGCTGGATG
ACGATCAGCGGGCAATATTGCTGGAAAATGGCCAGCTGGATTTTGCCGTGTCGCTGGCGGAAAACCAGCGGTTGCGTGGC
AGTGCGTTCGCGCAACGGCAAGGTATTTCTCTGGCATTACGGTTGTTACCTTCGCACTGTCCACAGCTCGAACAGCTTGG
TGCGCCACCGGTATTGCCGGAATTACTCAAGAGCGAGAATGGCATGATTCTGGTGACGGGGGCGACGGGGAGTGGCAAAT
CTACCACGCTGGCGGCGATGGTTGGCTATCTTAATCAACATGCCGATGCGCATATTCTGACGCTGGAAGATCCTGTGGAA
TATCTCTATGCCAGCCAGCGATGTTTGATCCAGCAGCGGGAAATTGGTTTGCACTGTATGACGTTCGCATCGGGGTTGCG
GGCCGCATTGCGGGAAGATCCTGATGTGATTTTGCTCGGAGAGCTACGTGACAGTGAGACAATCCGTCTGGCGCTGACGG
CGGCAGAAACCGGGCATCTGGTGCTGGCAACCTTACATACACGTGGTGCCGCGCAGGCAGTTGAGCGACTGGTGGATTCA
TTTCCGGCGCAGGAAAAAGACCCCGTGCGTAATCAACTGGCAGGTAGTTTACGGGCAGTGCTGTCACAAAAGCTGGAAGT
GGATAAACAGGAAGGACGCGTGGCGCTATTTGAATTGCTGATTAACACACCCGCGGTGGGGAATTTGATTCGTGAAGGGA
AAACCCACCAGTTACCGCATGTTATTCAAACCGGGCAGCAGGTGGGGATGATAACGTTTCAGCAGAGTTATCAGCACCGG
GTGGGGGAAGGGCGTTTGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.