Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | QDW53_RS04100 | Genome accession | NZ_CP122679 |
| Coordinates | 855302..856282 (+) | Length | 326 a.a. |
| NCBI ID | WP_001542340.1 | Uniprot ID | - |
| Organism | Escherichia coli strain ETEC4069 | ||
| Function | type IV pilus retraction (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 850302..861282
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QDW53_RS04070 (QDW53_04070) | - | 850679..851665 (-) | 987 | WP_000784004.1 | TRAP transporter substrate-binding protein | - |
| QDW53_RS04075 (QDW53_04075) | hemW | 851979..853115 (-) | 1137 | WP_063085753.1 | radical SAM family heme chaperone HemW | - |
| QDW53_RS04080 (QDW53_04080) | rdgB | 853108..853701 (-) | 594 | WP_001174747.1 | XTP/dITP diphosphatase | - |
| QDW53_RS04085 (QDW53_04085) | yggU | 853709..853999 (-) | 291 | WP_001277223.1 | DUF167 family protein YggU | - |
| QDW53_RS04090 (QDW53_04090) | yggT | 853996..854562 (-) | 567 | WP_001094831.1 | osmotic shock tolerance protein YggT | - |
| QDW53_RS04095 (QDW53_04095) | yggS | 854580..855284 (-) | 705 | WP_000997795.1 | pyridoxal phosphate homeostasis protein | - |
| QDW53_RS04100 (QDW53_04100) | pilT | 855302..856282 (+) | 981 | WP_001542340.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| QDW53_RS04105 (QDW53_04105) | ruvX | 856397..856813 (-) | 417 | WP_000017106.1 | Holliday junction resolvase RuvX | - |
| QDW53_RS04110 (QDW53_04110) | yqgE | 856813..857376 (-) | 564 | WP_001053178.1 | YqgE/AlgH family protein | - |
| QDW53_RS04115 (QDW53_04115) | gshB | 857485..858435 (-) | 951 | WP_000593273.1 | glutathione synthase | - |
| QDW53_RS04120 (QDW53_04120) | rsmE | 858448..859179 (-) | 732 | WP_001222509.1 | 16S rRNA (uracil(1498)-N(3))-methyltransferase | - |
| QDW53_RS04125 (QDW53_04125) | endA | 859259..859966 (-) | 708 | WP_000286500.1 | deoxyribonuclease I | - |
| QDW53_RS04130 (QDW53_04130) | yggI | 860061..860558 (-) | 498 | WP_000858396.1 | SprT family zinc-dependent metalloprotease | - |
Sequence
Protein
Download Length: 326 a.a. Molecular weight: 35958.12 Da Isoelectric Point: 5.7980
>NTDB_id=742249 QDW53_RS04100 WP_001542340.1 855302..856282(+) (pilT) [Escherichia coli strain ETEC4069]
MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDAPDVEELLREWLDDDQRTILLENGQLDFAVSLAENQRLRG
SAFAQRQGISLALRLLPSHCPQLEQLGAPPVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVE
YLYASQRCLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDS
FPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLVNTPAVGNLIREGKTHQLPHVIQTGQQVGMLTFQQSYQQR
VGEGRL
MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDAPDVEELLREWLDDDQRTILLENGQLDFAVSLAENQRLRG
SAFAQRQGISLALRLLPSHCPQLEQLGAPPVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVE
YLYASQRCLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDS
FPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLVNTPAVGNLIREGKTHQLPHVIQTGQQVGMLTFQQSYQQR
VGEGRL
Nucleotide
Download Length: 981 bp
>NTDB_id=742249 QDW53_RS04100 WP_001542340.1 855302..856282(+) (pilT) [Escherichia coli strain ETEC4069]
ATGAATATGGAAGAAATTGTGGCCCTTAGTGTAAAGCATAACGTCTCGGATCTACACCTGTGCAGCGCCTGGCCCGCACG
ATGGCGTATTCGCGGGCGAATGGAAGCTGCGCCGTTTGATGCGCCGGACGTCGAAGAGCTACTGCGGGAGTGGCTGGATG
ACGATCAGCGGACAATATTGCTGGAGAATGGTCAGTTGGATTTTGCTGTGTCGCTGGCGGAAAACCAGCGGTTGCGTGGC
AGTGCGTTCGCGCAACGGCAAGGTATTTCTCTGGCATTACGGTTGTTACCTTCGCACTGTCCACAGCTCGAACAGCTTGG
TGCGCCACCGGTATTGCCGGAATTACTCAAGAGCGAGAATGGCCTGATTCTGGTGACGGGGGCGACGGGGAGCGGCAAAT
CTACCACGCTGGCGGCGATGGTTGGCTATCTCAATCAACATGCCGATGCGCATATTCTGACGCTGGAAGATCCTGTTGAA
TATCTCTATGCCAGCCAGCGATGTTTGATCCAGCAGCGGGAAATTGGTTTGCACTGTATGACGTTCGCATCGGGATTGCG
GGCCGCATTGCGGGAAGATCCCGATGTGATTTTGCTGGGAGAGCTGCGTGACAGCGAAACGATACGTCTGGCGCTGACGG
CGGCAGAAACCGGACACCTGGTGCTGGCAACTTTACATACGCGTGGTGCGGCGCAGGCAGTTGAGCGACTGGTGGATTCA
TTTCCTGCGCAGGAAAAAGATCCCGTGCGTAATCAACTGGCAGGTAGTTTACGGGCGGTGTTGTCACAAAAGCTGGAAGT
GGATAAACAGGAAGGACGCGTGGCGCTGTTTGAATTGCTGGTTAACACTCCCGCGGTGGGGAATTTGATTCGCGAAGGGA
AAACCCACCAGTTACCGCATGTTATTCAAACCGGGCAGCAGGTGGGGATGTTAACGTTTCAGCAGAGTTATCAGCAGCGG
GTGGGGGAAGGACGTTTGTGA
ATGAATATGGAAGAAATTGTGGCCCTTAGTGTAAAGCATAACGTCTCGGATCTACACCTGTGCAGCGCCTGGCCCGCACG
ATGGCGTATTCGCGGGCGAATGGAAGCTGCGCCGTTTGATGCGCCGGACGTCGAAGAGCTACTGCGGGAGTGGCTGGATG
ACGATCAGCGGACAATATTGCTGGAGAATGGTCAGTTGGATTTTGCTGTGTCGCTGGCGGAAAACCAGCGGTTGCGTGGC
AGTGCGTTCGCGCAACGGCAAGGTATTTCTCTGGCATTACGGTTGTTACCTTCGCACTGTCCACAGCTCGAACAGCTTGG
TGCGCCACCGGTATTGCCGGAATTACTCAAGAGCGAGAATGGCCTGATTCTGGTGACGGGGGCGACGGGGAGCGGCAAAT
CTACCACGCTGGCGGCGATGGTTGGCTATCTCAATCAACATGCCGATGCGCATATTCTGACGCTGGAAGATCCTGTTGAA
TATCTCTATGCCAGCCAGCGATGTTTGATCCAGCAGCGGGAAATTGGTTTGCACTGTATGACGTTCGCATCGGGATTGCG
GGCCGCATTGCGGGAAGATCCCGATGTGATTTTGCTGGGAGAGCTGCGTGACAGCGAAACGATACGTCTGGCGCTGACGG
CGGCAGAAACCGGACACCTGGTGCTGGCAACTTTACATACGCGTGGTGCGGCGCAGGCAGTTGAGCGACTGGTGGATTCA
TTTCCTGCGCAGGAAAAAGATCCCGTGCGTAATCAACTGGCAGGTAGTTTACGGGCGGTGTTGTCACAAAAGCTGGAAGT
GGATAAACAGGAAGGACGCGTGGCGCTGTTTGAATTGCTGGTTAACACTCCCGCGGTGGGGAATTTGATTCGCGAAGGGA
AAACCCACCAGTTACCGCATGTTATTCAAACCGGGCAGCAGGTGGGGATGTTAACGTTTCAGCAGAGTTATCAGCAGCGG
GTGGGGGAAGGACGTTTGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.