Detailed information    

insolico Bioinformatically predicted

Overview


Name   prx   Type   Regulator
Locus tag   P8R99_RS00440 Genome accession   NZ_CP121160
Coordinates   60673..60852 (+) Length   59 a.a.
NCBI ID   WP_000965648.1    Uniprot ID   -
Organism   Streptococcus agalactiae strain S5     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context


Location: 55673..65852
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P8R99_RS00390 - 55871..56197 (+) 327 WP_000404431.1 DUF1366 domain-containing protein -
  P8R99_RS00395 - 56172..56384 (+) 213 WP_000698337.1 hypothetical protein -
  P8R99_RS00400 - 56397..56699 (+) 303 WP_000215499.1 hypothetical protein -
  P8R99_RS00405 - 56701..56955 (+) 255 WP_000611524.1 phage holin -
  P8R99_RS00410 - 57081..58412 (+) 1332 WP_222335084.1 GH25 family lysozyme -
  P8R99_RS00415 - 58548..59444 (+) 897 WP_001061853.1 sensor histidine kinase -
  P8R99_RS00420 - 59438..59736 (+) 299 Protein_79 STAS-like domain-containing protein -
  P8R99_RS00425 - 59846..60046 (+) 201 WP_000076712.1 CsbD family protein -
  P8R99_RS00430 - 60087..60257 (-) 171 WP_000356857.1 hypothetical protein -
  P8R99_RS00435 - 60393..60518 (-) 126 WP_017285425.1 hypothetical protein -
  P8R99_RS00440 prx 60673..60852 (+) 180 WP_000965648.1 hypothetical protein Regulator
  P8R99_RS00445 - 61259..61882 (-) 624 WP_000612513.1 DUF3862 domain-containing protein -
  P8R99_RS00450 - 61951..62646 (-) 696 WP_000224245.1 LrgB family protein -
  P8R99_RS00455 - 62627..63019 (-) 393 WP_000781334.1 CidA/LrgA family protein -
  P8R99_RS00460 - 63177..64412 (-) 1236 WP_000235899.1 cation diffusion facilitator family transporter -
  P8R99_RS00465 - 64476..65822 (-) 1347 WP_000956729.1 sodium:alanine symporter family protein -

Sequence


Protein


Download         Length: 59 a.a.        Molecular weight: 6972.99 Da        Isoelectric Point: 4.4488

>NTDB_id=736184 P8R99_RS00440 WP_000965648.1 60673..60852(+) (prx) [Streptococcus agalactiae strain S5]
MLYIDEFKEAIDRGYIMGSTVAIVRKNGKIFDYVLPHEKVRDDETVTIERVEEVLRELE

Nucleotide


Download         Length: 180 bp        

>NTDB_id=736184 P8R99_RS00440 WP_000965648.1 60673..60852(+) (prx) [Streptococcus agalactiae strain S5]
ATGTTATATATAGATGAGTTTAAAGAAGCGATTGATAGAGGATATATTATGGGAAGCACAGTTGCGATCGTACGAAAAAA
TGGAAAGATATTCGATTACGTTTTGCCACACGAAAAAGTTAGAGATGATGAAACTGTGACGATTGAGAGAGTAGAAGAAG
TGTTGAGGGAATTGGAGTAG

Domains



No domain identified.



Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS8232

74.138

98.305

0.729

  prx Streptococcus pyogenes MGAS315

72.881

100

0.729

  prx Streptococcus pyogenes MGAS315

69.492

100

0.695

  prx Streptococcus pyogenes MGAS315

70.69

98.305

0.695

  prx Streptococcus pyogenes MGAS315

93.023

72.881

0.678

  prx Streptococcus pyogenes MGAS315

80.488

69.492

0.559

  prx Streptococcus pyogenes MGAS315

73.81

71.186

0.525