Detailed information    

insolico Bioinformatically predicted

Overview

Name   comP   Type   Machinery gene
Locus tag   N5P13_RS15245 Genome accession   NZ_CP104736
Coordinates   3244150..3244593 (-) Length   147 a.a.
NCBI ID   WP_004923779.1    Uniprot ID   A0A7G2SAY1
Organism   Acinetobacter baylyi strain JAT2091     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3239150..3249593
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  N5P13_RS15230 (N5P13_15230) - 3240885..3241607 (-) 723 WP_004923789.1 fimbrial biogenesis chaperone -
  N5P13_RS15235 (N5P13_15235) - 3241653..3242105 (-) 453 WP_004923785.1 Csu type fimbrial protein -
  N5P13_RS15240 (N5P13_15240) pglL2 3242442..3244088 (-) 1647 WP_004923783.1 ComP-specific O-oligosaccharyltransferase PglL2 -
  N5P13_RS15245 (N5P13_15245) comP 3244150..3244593 (-) 444 WP_004923779.1 pilin Machinery gene
  N5P13_RS15250 (N5P13_15250) adhP 3244961..3245992 (-) 1032 WP_004923772.1 alcohol dehydrogenase AdhP -
  N5P13_RS15255 (N5P13_15255) - 3246797..3247660 (+) 864 WP_004923768.1 carbon-nitrogen hydrolase family protein -

Sequence

Protein


Download         Length: 147 a.a.        Molecular weight: 14872.03 Da        Isoelectric Point: 8.1036

>NTDB_id=731755 N5P13_RS15245 WP_004923779.1 3244150..3244593(-) (comP) [Acinetobacter baylyi strain JAT2091]
MNAQKGFTLIELMIVIAIIGILAAIAIPAYTDYTVRARVSEGLTAASSMKTTVSENILNAGALVAGTPSTAGSSCVGVQE
ISASNATTNVATATCGASSAGQIIVTMDTTKAKGANITLTPTYASGAVTWKCTTTSDKKYVPSECRG

Nucleotide


Download         Length: 444 bp        

>NTDB_id=731755 N5P13_RS15245 WP_004923779.1 3244150..3244593(-) (comP) [Acinetobacter baylyi strain JAT2091]
ATGAATGCACAAAAGGGTTTTACCTTAATTGAATTGATGATTGTCATTGCGATCATTGGTATTTTGGCAGCGATTGCGAT
TCCTGCTTATACAGATTATACAGTCCGTGCACGTGTTTCTGAAGGATTAACAGCAGCATCATCCATGAAAACGACGGTTT
CAGAAAATATTTTAAATGCAGGTGCATTAGTTGCAGGTACTCCTTCAACTGCAGGCTCATCTTGCGTTGGAGTCCAAGAA
ATTTCAGCAAGTAATGCCACTACGAACGTAGCAACTGCTACATGTGGAGCGAGTAGTGCTGGACAAATCATTGTAACTAT
GGATACTACTAAGGCTAAGGGCGCTAATATAACATTAACGCCAACATATGCTAGTGGCGCTGTAACATGGAAATGTACGA
CAACTTCTGATAAAAAATATGTACCATCAGAATGTCGTGGTTGA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(1-26)

Pilin (bacterial filament) (Pilin)

(35-146)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7G2SAY1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Acinetobacter baylyi ADP1

100

100

1
  pilA2 Legionella pneumophila str. Paris

53.793

98.639

0.531
  pilA2 Legionella pneumophila strain ERS1305867

53.103

98.639

0.524
  pilA Ralstonia pseudosolanacearum GMI1000

44.444

100

0.517
  pilE Neisseria elongata subsp. glycolytica ATCC 29315

38.587

100

0.483
  pilE Neisseria gonorrhoeae MS11

39.286

100

0.449
  pilA Pseudomonas aeruginosa PAK

40.789

100

0.422
  pilA/pilAI Pseudomonas stutzeri DSM 10701

42.069

98.639

0.415
  pilA/pilA1 Eikenella corrodens VA1

38.462

100

0.408
  pilE Neisseria gonorrhoeae strain FA1090

36.42

100

0.401
  pilA Acinetobacter baumannii strain A118

40

98.639

0.395
  pilA Vibrio campbellii strain DS40M4

41.912

92.517

0.388
  pilA/pilAII Pseudomonas stutzeri DSM 10701

39.583

97.959

0.388
  pilA Acinetobacter nosocomialis M2

40

91.837

0.367
  pilA Vibrio cholerae C6706

37.063

97.279

0.361
  pilA Vibrio cholerae strain A1552

37.063

97.279

0.361
  pilA Vibrio cholerae O1 biovar El Tor strain E7946

37.063

97.279

0.361