NTDB

Overview

Name	comP	Type	Machinery gene
Locus tag	N5P16_RS03550	Genome accession	NZ_CP104734
Coordinates	789656..790099 (+)	Length	147 a.a.
NCBI ID	WP_004923779.1	Uniprot ID	A0A7G2SAY1
Organism	Acinetobacter baylyi strain JAT2044
Function	assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 784656..795099

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
N5P16_RS03540 (N5P16_03540)	-	786589..787452 (-)	864	WP_004923768.1	carbon-nitrogen hydrolase family protein	-
N5P16_RS03545 (N5P16_03545)	adhP	788257..789288 (+)	1032	WP_004923772.1	alcohol dehydrogenase AdhP	-
N5P16_RS03550 (N5P16_03550)	comP	789656..790099 (+)	444	WP_004923779.1	pilin	Machinery gene
N5P16_RS03555 (N5P16_03555)	pglL2	790161..791807 (+)	1647	WP_004923783.1	ComP-specific O-oligosaccharyltransferase PglL2	-
N5P16_RS03560 (N5P16_03560)	-	792144..792596 (+)	453	WP_004923785.1	Csu type fimbrial protein	-
N5P16_RS03565 (N5P16_03565)	-	792642..793364 (+)	723	WP_004923789.1	fimbrial biogenesis chaperone	-

Sequence

Protein

Download Length: 147 a.a. Molecular weight: 14872.03 Da Isoelectric Point: 8.1036

                                >NTDB_id=731691 N5P16_RS03550 WP_004923779.1 789656..790099(+) (comP) [Acinetobacter baylyi strain JAT2044]

MNAQKGFTLIELMIVIAIIGILAAIAIPAYTDYTVRARVSEGLTAASSMKTTVSENILNAGALVAGTPSTAGSSCVGVQE

ISASNATTNVATATCGASSAGQIIVTMDTTKAKGANITLTPTYASGAVTWKCTTTSDKKYVPSECRG

Nucleotide

Download Length: 444 bp

                                >NTDB_id=731691 N5P16_RS03550 WP_004923779.1 789656..790099(+) (comP) [Acinetobacter baylyi strain JAT2044]

ATGAATGCACAAAAGGGTTTTACCTTAATTGAATTGATGATTGTCATTGCGATCATTGGTATTTTGGCAGCGATTGCGAT

TCCTGCTTATACAGATTATACAGTCCGTGCACGTGTTTCTGAAGGATTAACAGCAGCATCATCCATGAAAACGACGGTTT

CAGAAAATATTTTAAATGCAGGTGCATTAGTTGCAGGTACTCCTTCAACTGCAGGCTCATCTTGCGTTGGAGTCCAAGAA

ATTTCAGCAAGTAATGCCACTACGAACGTAGCAACTGCTACATGTGGAGCGAGTAGTGCTGGACAAATCATTGTAACTAT

GGATACTACTAAGGCTAAGGGCGCTAATATAACATTAACGCCAACATATGCTAGTGGCGCTGTAACATGGAAATGTACGA

CAACTTCTGATAAAAAATATGTACCATCAGAATGTCGTGGTTGA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(1-26)

Pilin (bacterial filament) (Pilin)

(35-146)

Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.

3D structure

Source	ID	Structure
AlphaFold DB	A0A7G2SAY1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.

Visualization of predicted probability:

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	H_a-value
comP	Acinetobacter baylyi ADP1	100	100	1
pilA2	Legionella pneumophila str. Paris	53.793	98.639	0.531
pilA2	Legionella pneumophila strain ERS1305867	53.103	98.639	0.524
pilA	Ralstonia pseudosolanacearum GMI1000	44.444	100	0.517
pilE	Neisseria elongata subsp. glycolytica ATCC 29315	38.587	100	0.483
pilE	Neisseria gonorrhoeae MS11	39.286	100	0.449
pilA	Pseudomonas aeruginosa PAK	40.789	100	0.422
pilA/pilAI	Pseudomonas stutzeri DSM 10701	42.069	98.639	0.415
pilA/pilA1	Eikenella corrodens VA1	38.462	100	0.408
pilE	Neisseria gonorrhoeae strain FA1090	36.42	100	0.401
pilA	Acinetobacter baumannii strain A118	40	98.639	0.395
pilA	Vibrio campbellii strain DS40M4	41.912	92.517	0.388
pilA/pilAII	Pseudomonas stutzeri DSM 10701	39.583	97.959	0.388
pilA	Acinetobacter nosocomialis M2	40	91.837	0.367
pilA	Vibrio cholerae C6706	37.063	97.279	0.361
pilA	Vibrio cholerae strain A1552	37.063	97.279	0.361
pilA	Vibrio cholerae O1 biovar El Tor strain E7946	37.063	97.279	0.361

Detailed information NTG0731691