Detailed information NTG0072371

Bioinformatically predicted

Overview

• Name: pilA2
• Type: Machinery gene
• Locus tag: GYH29_RS01815
• Genome accession: NZ_AP019312
• Coordinates: 398696..399118 (+)
• Length: 140 a.a.
• NCBI ID: WP_043592286.1
• Uniprot ID: -
• Organism: Chromobacterium haemolyticum strain CH06-BL
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 393696..404118

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GYH29_RS01800 (CH06BL_03510)	proB	394226..395344 (-)	1119	WP_043592290.1	glutamate 5-kinase	-
GYH29_RS01805 (CH06BL_03520)	-	395544..397046 (-)	1503	WP_141113105.1	hypothetical protein	-
GYH29_RS01810 (CH06BL_03530)	-	397148..398500 (-)	1353	WP_161523098.1	adenosylmethionine--8-amino-7-oxononanoate transaminase	-
GYH29_RS01815 (CH06BL_03540)	pilA2	398696..399118 (+)	423	WP_043592286.1	pilin	Machinery gene
GYH29_RS01820	pilA2	399131..399571 (+)	441	WP_043592285.1	pilin	Machinery gene
GYH29_RS01825 (CH06BL_03550)	-	399631..401433 (+)	1803	WP_081950357.1	PglL family O-oligosaccharyltransferase	-
GYH29_RS01830 (CH06BL_03560)	-	401509..403293 (+)	1785	WP_161523099.1	PglL family O-oligosaccharyltransferase	-

Sequence

Protein

• Length: 140 a.a.
• Molecular weight: 14563.42 Da
• Isoelectric Point: 6.4353

>NTDB_id=72371 GYH29_RS01815 WP_043592286.1 398696..399118(+) (pilA2) [Chromobacterium haemolyticum strain CH06-BL]
MRKAAGFTLIELMIVVAIIGILAAIAIPAYQNYTIRAKVAEGLTYADHAKTTVSEYYLTNNNWPSSNASAGLPDTLSGSY
VSNVQVSSGSGGISTITVSFNNSVASGLVVIFTPATNSGAVVWSCSSDAAYTQYLPSSCH

Nucleotide

• Length: 423 bp

>NTDB_id=72371 GYH29_RS01815 WP_043592286.1 398696..399118(+) (pilA2) [Chromobacterium haemolyticum strain CH06-BL]
ATGAGGAAGGCGGCTGGTTTTACCTTGATTGAGCTAATGATTGTTGTCGCCATTATTGGTATTTTGGCGGCGATTGCGAT
TCCGGCTTATCAGAATTATACGATTCGAGCTAAGGTGGCGGAGGGTCTGACTTATGCGGATCATGCTAAAACGACCGTTT
CGGAGTACTACTTGACAAATAATAATTGGCCTAGCTCGAATGCCAGTGCAGGTTTGCCGGATACATTGTCTGGCTCATAT
GTCAGTAATGTTCAAGTTAGTAGTGGTAGTGGTGGTATTAGTACTATAACGGTGTCTTTCAATAATAGTGTCGCCTCTGG
TTTAGTAGTAATATTTACCCCTGCAACGAATAGCGGTGCCGTTGTATGGTCGTGTTCCTCCGATGCGGCTTATACACAGT
ATCTGCCTTCTTCTTGTCATTAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (1-26)

• Pilin (bacterial filament) (Pilin) (36-139)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA2	Legionella pneumophila strain ERS1305867	51.408	100	0.521
pilA2	Legionella pneumophila str. Paris	48.936	100	0.493
comP	Acinetobacter baylyi ADP1	43.871	100	0.486
pilE	Neisseria elongata subsp. glycolytica ATCC 29315	34.225	100	0.457
pilE	Neisseria gonorrhoeae MS11	40.26	100	0.443
pilE	Neisseria gonorrhoeae strain FA1090	38.562	100	0.421
pilA	Ralstonia pseudosolanacearum GMI1000	42.537	95.714	0.407
pilA	Pseudomonas aeruginosa PAK	36.364	100	0.4
pilA/pilA1	Eikenella corrodens VA1	36.913	100	0.393
pilA/pilAI	Pseudomonas stutzeri DSM 10701	37.931	100	0.393
pilA	Acinetobacter baumannii strain A118	36.62	100	0.371
pilA/pilAII	Pseudomonas stutzeri DSM 10701	37.681	98.571	0.371
pilA	Vibrio cholerae C6706	35.616	100	0.371
pilA	Vibrio cholerae strain A1552	35.616	100	0.371
pilA	Vibrio cholerae O1 biovar El Tor strain E7946	35.616	100	0.371
comF	Acinetobacter baylyi ADP1	36.957	98.571	0.364
pilA	Vibrio parahaemolyticus RIMD 2210633	40.476	90	0.364