Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | NL410_RS12795 | Genome accession | NZ_CP117001 |
| Coordinates | 2225310..2226290 (-) | Length | 326 a.a. |
| NCBI ID | WP_001055620.1 | Uniprot ID | - |
| Organism | Escherichia coli strain MLI108K2 | ||
| Function | type IV pilus retraction (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2220310..2231290
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NL410_RS12765 (NL410_012765) | yggI | 2220973..2221470 (+) | 498 | WP_000858396.1 | SprT family zinc-dependent metalloprotease | - |
| NL410_RS12770 (NL410_012770) | endA | 2221565..2222272 (+) | 708 | WP_000286500.1 | deoxyribonuclease I | - |
| NL410_RS12775 (NL410_012775) | rsmE | 2222352..2223083 (+) | 732 | WP_001222508.1 | 16S rRNA (uracil(1498)-N(3))-methyltransferase | - |
| NL410_RS12780 (NL410_012780) | gshB | 2223096..2224046 (+) | 951 | WP_000593284.1 | glutathione synthase | - |
| NL410_RS12785 (NL410_012785) | yqgE | 2224155..2224718 (+) | 564 | WP_001053178.1 | YqgE/AlgH family protein | - |
| NL410_RS12790 (NL410_012790) | ruvX | 2224718..2225134 (+) | 417 | WP_000017111.1 | Holliday junction resolvase RuvX | - |
| NL410_RS12795 (NL410_012795) | pilT | 2225310..2226290 (-) | 981 | WP_001055620.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| NL410_RS12800 (NL410_012800) | yggS | 2226308..2227012 (+) | 705 | WP_000997795.1 | pyridoxal phosphate homeostasis protein | - |
| NL410_RS12805 (NL410_012805) | yggT | 2227030..2227596 (+) | 567 | WP_001094831.1 | osmotic shock tolerance protein YggT | - |
| NL410_RS12810 (NL410_012810) | yggU | 2227593..2227883 (+) | 291 | WP_001277222.1 | DUF167 family protein YggU | - |
| NL410_RS12815 (NL410_012815) | rdgB | 2227891..2228484 (+) | 594 | WP_001174743.1 | XTP/dITP diphosphatase | - |
| NL410_RS12820 (NL410_012820) | hemW | 2228477..2229613 (+) | 1137 | WP_046464143.1 | radical SAM family heme chaperone HemW | - |
| NL410_RS12825 (NL410_012825) | yggM | 2229768..2230775 (-) | 1008 | WP_000745210.1 | DUF1202 family protein | - |
Sequence
Protein
Download Length: 326 a.a. Molecular weight: 35903.08 Da Isoelectric Point: 5.5860
>NTDB_id=715757 NL410_RS12795 WP_001055620.1 2225310..2226290(-) (pilT) [Escherichia coli strain MLI108K2]
MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGLMEAAPFDAPDVEELLREWLDDDQRAILLENGQLDFAVSLAENQRLRG
SAFAQRQGISLALRLLPSHCPQLEQLGAPTVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVE
YIYASQRCLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDS
FPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVGMLTFQQSYQQR
VGEGRL
MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGLMEAAPFDAPDVEELLREWLDDDQRAILLENGQLDFAVSLAENQRLRG
SAFAQRQGISLALRLLPSHCPQLEQLGAPTVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVE
YIYASQRCLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDS
FPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVGMLTFQQSYQQR
VGEGRL
Nucleotide
Download Length: 981 bp
>NTDB_id=715757 NL410_RS12795 WP_001055620.1 2225310..2226290(-) (pilT) [Escherichia coli strain MLI108K2]
ATGAATATGGAAGAAATTGTGGCCCTTAGTGTAAAGCATAACGTCTCGGATCTACACCTGTGCAGCGCCTGGCCCGCACG
ATGGCGCATTCGCGGGCTAATGGAAGCTGCGCCGTTTGATGCGCCGGACGTCGAAGAGCTACTGCGGGAGTGGCTGGATG
ACGATCAGCGGGCAATATTGCTGGAAAATGGCCAGCTGGATTTTGCCGTGTCGCTGGCGGAAAACCAGCGGTTGCGTGGC
AGTGCGTTCGCGCAACGGCAAGGTATTTCTCTGGCATTACGGTTGTTACCTTCGCACTGTCCACAGCTCGAACAGCTTGG
CGCACCAACGGTATTGCCGGAATTACTCAAGAGCGAGAATGGCCTGATTCTGGTGACGGGGGCGACGGGGAGCGGCAAAT
CTACCACGCTGGCGGCGATGGTTGGCTATCTCAATCAACATGCCGATGCGCATATTCTGACGCTGGAAGATCCTGTTGAA
TATATCTATGCCAGCCAGCGATGTTTGATCCAGCAGCGGGAAATTGGTTTGCACTGTATGACGTTCGCATCGGGATTGCG
GGCCGCATTGCGGGAAGATCCTGATGTGATTTTGCTCGGAGAGCTGCGTGACAGCGAGACAATCCGTCTGGCACTGACGG
CGGCAGAAACCGGGCATTTGGTGCTGGCAACATTACATACGCGTGGTGCCGCGCAGGCAGTTGAGCGACTGGTGGATTCA
TTTCCGGCGCAGGAAAAAGATCCCGTACGTAATCAACTGGCAGGTAGTTTACGGGCCGTGTTGTCACAAAAGCTGGAAGT
GGATAAACAGGAAGGACGCGTGGCGCTGTTTGAATTATTGATTAACACTCCCGCGGTGGGGAATTTGATTCGCGAAGGGA
AAACCCACCAGTTACCGCATGTTATTCAAACCGGGCAGCAGGTGGGGATGTTAACGTTTCAGCAGAGTTATCAGCAGCGG
GTGGGGGAAGGGCGTTTGTGA
ATGAATATGGAAGAAATTGTGGCCCTTAGTGTAAAGCATAACGTCTCGGATCTACACCTGTGCAGCGCCTGGCCCGCACG
ATGGCGCATTCGCGGGCTAATGGAAGCTGCGCCGTTTGATGCGCCGGACGTCGAAGAGCTACTGCGGGAGTGGCTGGATG
ACGATCAGCGGGCAATATTGCTGGAAAATGGCCAGCTGGATTTTGCCGTGTCGCTGGCGGAAAACCAGCGGTTGCGTGGC
AGTGCGTTCGCGCAACGGCAAGGTATTTCTCTGGCATTACGGTTGTTACCTTCGCACTGTCCACAGCTCGAACAGCTTGG
CGCACCAACGGTATTGCCGGAATTACTCAAGAGCGAGAATGGCCTGATTCTGGTGACGGGGGCGACGGGGAGCGGCAAAT
CTACCACGCTGGCGGCGATGGTTGGCTATCTCAATCAACATGCCGATGCGCATATTCTGACGCTGGAAGATCCTGTTGAA
TATATCTATGCCAGCCAGCGATGTTTGATCCAGCAGCGGGAAATTGGTTTGCACTGTATGACGTTCGCATCGGGATTGCG
GGCCGCATTGCGGGAAGATCCTGATGTGATTTTGCTCGGAGAGCTGCGTGACAGCGAGACAATCCGTCTGGCACTGACGG
CGGCAGAAACCGGGCATTTGGTGCTGGCAACATTACATACGCGTGGTGCCGCGCAGGCAGTTGAGCGACTGGTGGATTCA
TTTCCGGCGCAGGAAAAAGATCCCGTACGTAATCAACTGGCAGGTAGTTTACGGGCCGTGTTGTCACAAAAGCTGGAAGT
GGATAAACAGGAAGGACGCGTGGCGCTGTTTGAATTATTGATTAACACTCCCGCGGTGGGGAATTTGATTCGCGAAGGGA
AAACCCACCAGTTACCGCATGTTATTCAAACCGGGCAGCAGGTGGGGATGTTAACGTTTCAGCAGAGTTATCAGCAGCGG
GTGGGGGAAGGGCGTTTGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.