Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | NMD40_RS03825 | Genome accession | NZ_CP100958 |
| Coordinates | 772663..773643 (+) | Length | 326 a.a. |
| NCBI ID | WP_001618842.1 | Uniprot ID | A0AAF0HMM4 |
| Organism | Escherichia coli strain ET450 | ||
| Function | type IV pilus retraction (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 767663..778643
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NMD40_RS03795 (NMD40_03775) | yggM | 768269..769276 (+) | 1008 | WP_001460056.1 | DUF1202 family protein | - |
| NMD40_RS03800 (NMD40_03780) | hemW | 769340..770476 (-) | 1137 | WP_049290749.1 | radical SAM family heme chaperone HemW | - |
| NMD40_RS03805 (NMD40_03785) | rdgB | 770469..771062 (-) | 594 | WP_001174735.1 | XTP/dITP diphosphatase | - |
| NMD40_RS03810 (NMD40_03790) | yggU | 771070..771360 (-) | 291 | WP_000994920.1 | DUF167 family protein YggU | - |
| NMD40_RS03815 (NMD40_03795) | yggT | 771357..771923 (-) | 567 | WP_001094831.1 | osmotic shock tolerance protein YggT | - |
| NMD40_RS03820 (NMD40_03800) | yggS | 771941..772645 (-) | 705 | WP_000997795.1 | pyridoxal phosphate homeostasis protein | - |
| NMD40_RS03825 (NMD40_03805) | pilT | 772663..773643 (+) | 981 | WP_001618842.1 | PilT/PilU family type 4a pilus ATPase | Machinery gene |
| NMD40_RS03830 (NMD40_03810) | ruvX | 773827..774243 (-) | 417 | WP_000017106.1 | Holliday junction resolvase RuvX | - |
| NMD40_RS03835 (NMD40_03815) | yqgE | 774243..774806 (-) | 564 | WP_001053178.1 | YqgE/AlgH family protein | - |
| NMD40_RS03840 (NMD40_03820) | gshB | 774915..775865 (-) | 951 | WP_000593273.1 | glutathione synthase | - |
| NMD40_RS03845 (NMD40_03825) | rsmE | 775878..776609 (-) | 732 | WP_001300912.1 | 16S rRNA (uracil(1498)-N(3))-methyltransferase | - |
| NMD40_RS03850 (NMD40_03830) | endA | 776689..777396 (-) | 708 | WP_000286500.1 | deoxyribonuclease I | - |
| NMD40_RS03855 (NMD40_03835) | yggI | 777491..777988 (-) | 498 | WP_001300769.1 | SprT family zinc-dependent metalloprotease | - |
Sequence
Protein
Download Length: 326 a.a. Molecular weight: 35937.10 Da Isoelectric Point: 5.9172
>NTDB_id=707863 NMD40_RS03825 WP_001618842.1 772663..773643(+) (pilT) [Escherichia coli strain ET450]
MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGLMEAAPFDAPDVEELLREWLDDDQRAILLENGQLDFAVSLAENQRLRG
SAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVE
YLYASQRCLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQSVERLVDS
FPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVGMITFQQSYQHR
VGEGRL
MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGLMEAAPFDAPDVEELLREWLDDDQRAILLENGQLDFAVSLAENQRLRG
SAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVE
YLYASQRCLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQSVERLVDS
FPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVGMITFQQSYQHR
VGEGRL
Nucleotide
Download Length: 981 bp
>NTDB_id=707863 NMD40_RS03825 WP_001618842.1 772663..773643(+) (pilT) [Escherichia coli strain ET450]
ATGAATATGGAAGAAATTGTGGCCCTTAGTGTAAAGCATAACGTCTCGGATCTACACCTGTGCAGCGCCTGGCCCGCACG
ATGGCGCATTCGCGGGCTAATGGAAGCTGCGCCGTTTGATGCGCCGGACGTCGAAGAGCTACTGCGGGAGTGGCTGGATG
ACGATCAGCGGGCAATATTGCTGGAAAATGGCCAGCTGGATTTTGCCGTGTCGCTGGCGGAAAACCAGCGATTGCGTGGC
AGCGCATTCGCGCAACGGCATGGCATTTCGCTGGCGTTACGGCTGTTACCTTCGCACTGCCCGCAGCTCGAACAGCTTGG
CGCACCAACGGTATTGCCGGAATTACTCAAGAGCGAGAATGGCCTGATTCTGGTGACGGGGGCGACGGGGAGCGGCAAAT
CTACCACGCTGGCGGCGATGGTTGGCTATCTCAATCAACATGCCGATGCGCATATTCTGACGCTGGAAGATCCTGTTGAA
TATCTCTATGCCAGCCAGCGATGTTTGATCCAGCAGCGGGAAATTGGTTTGCACTGTATGACGTTCGCATCGGGATTGCG
GGCCGCATTGCGGGAAGATCCTGATGTGATTTTGCTCGGAGAGCTGCGTGACAGCGAGACAATCCGTCTGGCACTGACGG
CGGCAGAAACCGGGCATTTGGTGCTGGCAACATTACATACGCGTGGTGCCGCGCAGTCAGTTGAGCGACTGGTGGATTCA
TTTCCGGCGCAGGAAAAAGATCCCGTACGTAATCAACTGGCAGGGAGTTTACGGGCCGTGTTGTCACAAAAGCTGGAAGT
GGATAAACAGGAAGGACGCGTGGCGCTATTTGAATTGCTGATTAACACACCCGCGGTGGGGAATTTGATTCGCGAAGGGA
AAACCCACCAGTTACCGCATGTTATTCAAACCGGGCAGCAGGTGGGGATGATAACGTTTCAGCAGAGTTATCAGCACCGG
GTGGGGGAAGGGCGTTTGTGA
ATGAATATGGAAGAAATTGTGGCCCTTAGTGTAAAGCATAACGTCTCGGATCTACACCTGTGCAGCGCCTGGCCCGCACG
ATGGCGCATTCGCGGGCTAATGGAAGCTGCGCCGTTTGATGCGCCGGACGTCGAAGAGCTACTGCGGGAGTGGCTGGATG
ACGATCAGCGGGCAATATTGCTGGAAAATGGCCAGCTGGATTTTGCCGTGTCGCTGGCGGAAAACCAGCGATTGCGTGGC
AGCGCATTCGCGCAACGGCATGGCATTTCGCTGGCGTTACGGCTGTTACCTTCGCACTGCCCGCAGCTCGAACAGCTTGG
CGCACCAACGGTATTGCCGGAATTACTCAAGAGCGAGAATGGCCTGATTCTGGTGACGGGGGCGACGGGGAGCGGCAAAT
CTACCACGCTGGCGGCGATGGTTGGCTATCTCAATCAACATGCCGATGCGCATATTCTGACGCTGGAAGATCCTGTTGAA
TATCTCTATGCCAGCCAGCGATGTTTGATCCAGCAGCGGGAAATTGGTTTGCACTGTATGACGTTCGCATCGGGATTGCG
GGCCGCATTGCGGGAAGATCCTGATGTGATTTTGCTCGGAGAGCTGCGTGACAGCGAGACAATCCGTCTGGCACTGACGG
CGGCAGAAACCGGGCATTTGGTGCTGGCAACATTACATACGCGTGGTGCCGCGCAGTCAGTTGAGCGACTGGTGGATTCA
TTTCCGGCGCAGGAAAAAGATCCCGTACGTAATCAACTGGCAGGGAGTTTACGGGCCGTGTTGTCACAAAAGCTGGAAGT
GGATAAACAGGAAGGACGCGTGGCGCTATTTGAATTGCTGATTAACACACCCGCGGTGGGGAATTTGATTCGCGAAGGGA
AAACCCACCAGTTACCGCATGTTATTCAAACCGGGCAGCAGGTGGGGATGATAACGTTTCAGCAGAGTTATCAGCACCGG
GTGGGGGAAGGGCGTTTGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.