Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | NMD45_RS04245 | Genome accession | NZ_CP100941 |
| Coordinates | 864598..865578 (+) | Length | 326 a.a. |
| NCBI ID | WP_023149798.1 | Uniprot ID | A0A1X9TJB3 |
| Organism | Escherichia coli strain ET625 | ||
| Function | type IV pilus retraction (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 859598..870578
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NMD45_RS04215 (NMD45_04200) | yggM | 860203..861150 (+) | 948 | WP_000745231.1 | DUF1202 family protein | - |
| NMD45_RS04220 (NMD45_04205) | hemW | 861275..862411 (-) | 1137 | WP_000239953.1 | radical SAM family heme chaperone HemW | - |
| NMD45_RS04225 (NMD45_04210) | rdgB | 862404..862997 (-) | 594 | WP_001174738.1 | XTP/dITP diphosphatase | - |
| NMD45_RS04230 (NMD45_04215) | yggU | 863005..863295 (-) | 291 | WP_001277222.1 | DUF167 family protein YggU | - |
| NMD45_RS04235 (NMD45_04220) | yggT | 863292..863858 (-) | 567 | WP_001094831.1 | osmotic shock tolerance protein YggT | - |
| NMD45_RS04240 (NMD45_04225) | yggS | 863876..864580 (-) | 705 | WP_000997804.1 | pyridoxal phosphate homeostasis protein | - |
| NMD45_RS04245 (NMD45_04230) | pilT | 864598..865578 (+) | 981 | WP_023149798.1 | PilT/PilU family type 4a pilus ATPase | Machinery gene |
| NMD45_RS04250 (NMD45_04235) | ruvX | 865752..866168 (-) | 417 | WP_000017106.1 | Holliday junction resolvase RuvX | - |
| NMD45_RS04255 (NMD45_04240) | yqgE | 866168..866731 (-) | 564 | WP_001053178.1 | YqgE/AlgH family protein | - |
| NMD45_RS04260 (NMD45_04245) | gshB | 866840..867790 (-) | 951 | WP_000593273.1 | glutathione synthase | - |
| NMD45_RS04265 (NMD45_04250) | rsmE | 867803..868534 (-) | 732 | WP_001300912.1 | 16S rRNA (uracil(1498)-N(3))-methyltransferase | - |
| NMD45_RS04270 (NMD45_04255) | endA | 868614..869321 (-) | 708 | WP_023149797.1 | deoxyribonuclease I | - |
| NMD45_RS04275 (NMD45_04260) | yggI | 869416..869913 (-) | 498 | WP_000858396.1 | SprT family zinc-dependent metalloprotease | - |
Sequence
Protein
Download Length: 326 a.a. Molecular weight: 36001.19 Da Isoelectric Point: 5.9975
>NTDB_id=707751 NMD45_RS04245 WP_023149798.1 864598..865578(+) (pilT) [Escherichia coli strain ET625]
MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDAPDVEELLREWLDDDQRAILLENGQLDFAVSLAENQRLRG
SAFAQRQGISLALRLLPSHCPQLEQLGAPPVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVE
YLYTSQRCLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDS
FPAQEKDPVRNQLAGSLRAGLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVGMITFQQSYQQR
VKEGRL
MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDAPDVEELLREWLDDDQRAILLENGQLDFAVSLAENQRLRG
SAFAQRQGISLALRLLPSHCPQLEQLGAPPVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVE
YLYTSQRCLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDS
FPAQEKDPVRNQLAGSLRAGLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVGMITFQQSYQQR
VKEGRL
Nucleotide
Download Length: 981 bp
>NTDB_id=707751 NMD45_RS04245 WP_023149798.1 864598..865578(+) (pilT) [Escherichia coli strain ET625]
ATGAATATGGAAGAAATTGTGGCCCTTAGTGTAAAGCATAACGTCTCGGATCTACACCTGTGCAGCGCCTGGCCCGCACG
ATGGCGTATTCGCGGGAGAATGGAAGCTGCGCCGTTTGACGCGCCGGACGTCGAAGAGCTACTGCGGGAGTGGCTGGATG
ACGATCAGCGGGCAATATTGCTGGAGAATGGTCAGCTGGATTTTGCTGTGTCGCTGGCGGAAAACCAGCGATTGCGCGGC
AGTGCGTTCGCACAACGGCAAGGTATTTCTCTGGCGTTACGGCTGTTACCTTCGCACTGCCCGCAGCTCGAACAGCTTGG
CGCACCACCGGTATTGCCGGAATTACTCAAGAGCGAGAATGGCCTGATTCTGGTGACGGGGGCGACGGGGAGCGGCAAAT
CTACCACGCTGGCGGCGATGGTTGGCTATCTCAATCAACATGCCGATGCGCATATTCTGACGCTGGAAGATCCTGTGGAA
TATCTCTATACCAGTCAGCGATGTTTGATCCAACAGCGGGAGATTGGTTTGCACTGTATGACTTTCGCATCGGGATTGCG
GGCTGCATTGCGGGAAGATCCTGATGTGATTTTGCTCGGAGAGCTGCGTGATAGCGAGACAATCCGTCTGGCGCTGACGG
CGGCAGAAACCGGGCATCTGGTGCTGGCGACATTACACACGCGCGGCGCAGCGCAGGCAGTTGAGCGACTGGTGGATTCG
TTTCCGGCGCAGGAAAAAGATCCCGTGCGTAATCAACTGGCAGGTAGTTTACGGGCGGGGTTGTCACAAAAGCTGGAAGT
GGATAAACAGGAAGGACGCGTGGCGCTGTTTGAATTACTGATTAACACACCCGCGGTGGGGAATTTGATTCGTGAAGGGA
AAACCCACCAGTTACCGCATGTTATTCAAACCGGGCAGCAGGTGGGGATGATAACGTTTCAGCAGAGTTATCAGCAGCGG
GTGAAAGAAGGGCGCTTGTGA
ATGAATATGGAAGAAATTGTGGCCCTTAGTGTAAAGCATAACGTCTCGGATCTACACCTGTGCAGCGCCTGGCCCGCACG
ATGGCGTATTCGCGGGAGAATGGAAGCTGCGCCGTTTGACGCGCCGGACGTCGAAGAGCTACTGCGGGAGTGGCTGGATG
ACGATCAGCGGGCAATATTGCTGGAGAATGGTCAGCTGGATTTTGCTGTGTCGCTGGCGGAAAACCAGCGATTGCGCGGC
AGTGCGTTCGCACAACGGCAAGGTATTTCTCTGGCGTTACGGCTGTTACCTTCGCACTGCCCGCAGCTCGAACAGCTTGG
CGCACCACCGGTATTGCCGGAATTACTCAAGAGCGAGAATGGCCTGATTCTGGTGACGGGGGCGACGGGGAGCGGCAAAT
CTACCACGCTGGCGGCGATGGTTGGCTATCTCAATCAACATGCCGATGCGCATATTCTGACGCTGGAAGATCCTGTGGAA
TATCTCTATACCAGTCAGCGATGTTTGATCCAACAGCGGGAGATTGGTTTGCACTGTATGACTTTCGCATCGGGATTGCG
GGCTGCATTGCGGGAAGATCCTGATGTGATTTTGCTCGGAGAGCTGCGTGATAGCGAGACAATCCGTCTGGCGCTGACGG
CGGCAGAAACCGGGCATCTGGTGCTGGCGACATTACACACGCGCGGCGCAGCGCAGGCAGTTGAGCGACTGGTGGATTCG
TTTCCGGCGCAGGAAAAAGATCCCGTGCGTAATCAACTGGCAGGTAGTTTACGGGCGGGGTTGTCACAAAAGCTGGAAGT
GGATAAACAGGAAGGACGCGTGGCGCTGTTTGAATTACTGATTAACACACCCGCGGTGGGGAATTTGATTCGTGAAGGGA
AAACCCACCAGTTACCGCATGTTATTCAAACCGGGCAGCAGGTGGGGATGATAACGTTTCAGCAGAGTTATCAGCAGCGG
GTGAAAGAAGGGCGCTTGTGA
Similar proteins
Only experimentally validated proteins are listed.