Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | PCS82_RS11050 | Genome accession | NZ_CP115376 |
| Coordinates | 2289087..2290067 (-) | Length | 326 a.a. |
| NCBI ID | WP_001598608.1 | Uniprot ID | - |
| Organism | Escherichia coli strain CUVET20-PYO4 | ||
| Function | type IV pilus retraction (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2284087..2295067
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PCS82_RS11020 (PCS82_11000) | yggI | 2284811..2285308 (+) | 498 | WP_001300769.1 | SprT family zinc-dependent metalloprotease | - |
| PCS82_RS11025 (PCS82_11005) | endA | 2285403..2286110 (+) | 708 | WP_000286497.1 | deoxyribonuclease I | - |
| PCS82_RS11030 (PCS82_11010) | rsmE | 2286190..2286921 (+) | 732 | WP_001222509.1 | 16S rRNA (uracil(1498)-N(3))-methyltransferase | - |
| PCS82_RS11035 (PCS82_11015) | gshB | 2286934..2287884 (+) | 951 | WP_000593273.1 | glutathione synthase | - |
| PCS82_RS11040 (PCS82_11020) | yqgE | 2287993..2288556 (+) | 564 | WP_001053178.1 | YqgE/AlgH family protein | - |
| PCS82_RS11045 (PCS82_11025) | ruvX | 2288556..2288972 (+) | 417 | WP_000017111.1 | Holliday junction resolvase RuvX | - |
| PCS82_RS11050 (PCS82_11030) | pilT | 2289087..2290067 (-) | 981 | WP_001598608.1 | PilT/PilU family type 4a pilus ATPase | Machinery gene |
| PCS82_RS11055 (PCS82_11035) | yggS | 2290085..2290789 (+) | 705 | WP_001598609.1 | pyridoxal phosphate homeostasis protein | - |
| PCS82_RS11060 (PCS82_11040) | yggT | 2290807..2291373 (+) | 567 | WP_001094831.1 | osmotic shock tolerance protein YggT | - |
| PCS82_RS11065 (PCS82_11045) | yggU | 2291370..2291660 (+) | 291 | WP_001277222.1 | DUF167 family protein YggU | - |
| PCS82_RS11070 (PCS82_11050) | rdgB | 2291668..2292261 (+) | 594 | WP_001174747.1 | XTP/dITP diphosphatase | - |
| PCS82_RS11075 (PCS82_11055) | hemW | 2292254..2293390 (+) | 1137 | WP_001521257.1 | radical SAM family heme chaperone HemW | - |
| PCS82_RS11080 (PCS82_11060) | - | 2293467..2294164 (+) | 698 | WP_095033700.1 | IS1-like element IS1B family transposase | - |
| PCS82_RS11085 (PCS82_11065) | dctP | 2294169..2294771 (+) | 603 | Protein_2175 | TRAP transporter substrate-binding protein DctP | - |
Sequence
Protein
Download Length: 326 a.a. Molecular weight: 35928.10 Da Isoelectric Point: 5.7980
>NTDB_id=704009 PCS82_RS11050 WP_001598608.1 2289087..2290067(-) (pilT) [Escherichia coli strain CUVET20-PYO4]
MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDAPDVEELLREWLDDDQRAILLENGQLDFAVSLAENQRLRG
SAFAQRQGISLALRLLPSHCPQLEQLGAPPVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVE
YLYASQRCLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDS
FPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLVNTPAVGNLIREGKTHQLPHVIQTGQQVGMLTFQQSYQQR
VGEGRL
MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDAPDVEELLREWLDDDQRAILLENGQLDFAVSLAENQRLRG
SAFAQRQGISLALRLLPSHCPQLEQLGAPPVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVE
YLYASQRCLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDS
FPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLVNTPAVGNLIREGKTHQLPHVIQTGQQVGMLTFQQSYQQR
VGEGRL
Nucleotide
Download Length: 981 bp
>NTDB_id=704009 PCS82_RS11050 WP_001598608.1 2289087..2290067(-) (pilT) [Escherichia coli strain CUVET20-PYO4]
ATGAATATGGAAGAAATTGTGGCCCTTAGTGTAAAGCATAACGTCTCGGATCTACACCTGTGCAGCGCCTGGCCCGCACG
ATGGCGTATTCGCGGGCGAATGGAAGCTGCGCCGTTTGATGCGCCGGACGTCGAAGAGCTACTGCGGGAGTGGCTGGATG
ACGATCAGCGGGCAATATTGCTGGAGAATGGTCAGCTGGATTTTGCTGTGTCGCTGGCGGAAAACCAGCGGTTGCGTGGC
AGTGCGTTCGCGCAACGGCAAGGTATTTCTCTGGCATTACGGTTGTTACCTTCGCACTGTCCACAGCTCGAACAGCTTGG
TGCGCCACCGGTATTGCCGGAATTACTCAAGAGCGAGAATGGCCTGATTCTGGTGACGGGAGCGACGGGGAGCGGCAAAT
CTACCACGCTGGCGGCGATGGTTGGCTATCTCAATCAACATGCCGATGCGCATATTCTGACGCTGGAAGATCCTGTTGAA
TATCTCTATGCCAGCCAGCGATGTTTGATCCAGCAGCGGGAAATTGGTTTGCACTGTATGACGTTCGCATCGGGATTGCG
GGCCGCATTGCGGGAAGATCCCGATGTGATTTTGCTCGGAGAGCTGCGTGACAGCGAGACAATCCGTCTGGCGCTGACGG
CAGCAGAAACCGGACACCTGGTGCTGGCAACTTTACATACGCGTGGTGCGGCGCAGGCAGTTGAGCGGTTGGTGGATTCA
TTTCCGGCGCAGGAAAAAGATCCCGTGCGTAATCAACTGGCAGGTAGTTTACGGGCGGTGTTGTCACAAAAGCTGGAAGT
GGATAAACAGGAAGGACGCGTGGCGCTGTTTGAATTGCTGGTTAACACACCCGCGGTGGGGAATTTGATTCGCGAAGGGA
AAACCCACCAGTTACCGCATGTTATTCAAACCGGGCAGCAGGTGGGGATGTTAACGTTTCAGCAGAGTTATCAGCAGCGG
GTGGGGGAAGGACGTTTGTGA
ATGAATATGGAAGAAATTGTGGCCCTTAGTGTAAAGCATAACGTCTCGGATCTACACCTGTGCAGCGCCTGGCCCGCACG
ATGGCGTATTCGCGGGCGAATGGAAGCTGCGCCGTTTGATGCGCCGGACGTCGAAGAGCTACTGCGGGAGTGGCTGGATG
ACGATCAGCGGGCAATATTGCTGGAGAATGGTCAGCTGGATTTTGCTGTGTCGCTGGCGGAAAACCAGCGGTTGCGTGGC
AGTGCGTTCGCGCAACGGCAAGGTATTTCTCTGGCATTACGGTTGTTACCTTCGCACTGTCCACAGCTCGAACAGCTTGG
TGCGCCACCGGTATTGCCGGAATTACTCAAGAGCGAGAATGGCCTGATTCTGGTGACGGGAGCGACGGGGAGCGGCAAAT
CTACCACGCTGGCGGCGATGGTTGGCTATCTCAATCAACATGCCGATGCGCATATTCTGACGCTGGAAGATCCTGTTGAA
TATCTCTATGCCAGCCAGCGATGTTTGATCCAGCAGCGGGAAATTGGTTTGCACTGTATGACGTTCGCATCGGGATTGCG
GGCCGCATTGCGGGAAGATCCCGATGTGATTTTGCTCGGAGAGCTGCGTGACAGCGAGACAATCCGTCTGGCGCTGACGG
CAGCAGAAACCGGACACCTGGTGCTGGCAACTTTACATACGCGTGGTGCGGCGCAGGCAGTTGAGCGGTTGGTGGATTCA
TTTCCGGCGCAGGAAAAAGATCCCGTGCGTAATCAACTGGCAGGTAGTTTACGGGCGGTGTTGTCACAAAAGCTGGAAGT
GGATAAACAGGAAGGACGCGTGGCGCTGTTTGAATTGCTGGTTAACACACCCGCGGTGGGGAATTTGATTCGCGAAGGGA
AAACCCACCAGTTACCGCATGTTATTCAAACCGGGCAGCAGGTGGGGATGTTAACGTTTCAGCAGAGTTATCAGCAGCGG
GTGGGGGAAGGACGTTTGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.