Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | NFJ01_RS21755 | Genome accession | NZ_CP099511 |
| Coordinates | 4538200..4539180 (+) | Length | 326 a.a. |
| NCBI ID | WP_252687057.1 | Uniprot ID | - |
| Organism | Lelliottia amnigena strain P13 | ||
| Function | type IV pilus retraction (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 4533200..4544180
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NFJ01_RS21720 (NFJ01_21720) | - | 4533531..4534250 (+) | 720 | WP_059177565.1 | DUF2884 domain-containing protein | - |
| NFJ01_RS21725 (NFJ01_21725) | - | 4534467..4534805 (-) | 339 | WP_252687050.1 | endonuclease domain-containing protein | - |
| NFJ01_RS21730 (NFJ01_21730) | hemW | 4534869..4536011 (-) | 1143 | WP_059177567.1 | radical SAM family heme chaperone HemW | - |
| NFJ01_RS21735 (NFJ01_21735) | - | 4536004..4536597 (-) | 594 | WP_252687052.1 | XTP/dITP diphosphatase | - |
| NFJ01_RS21740 (NFJ01_21740) | yggU | 4536606..4536896 (-) | 291 | WP_252687054.1 | DUF167 family protein YggU | - |
| NFJ01_RS21745 (NFJ01_21745) | - | 4536893..4537459 (-) | 567 | WP_059177570.1 | YggT family protein | - |
| NFJ01_RS21750 (NFJ01_21750) | - | 4537481..4538182 (-) | 702 | WP_252687056.1 | YggS family pyridoxal phosphate-dependent enzyme | - |
| NFJ01_RS21755 (NFJ01_21755) | pilT | 4538200..4539180 (+) | 981 | WP_252687057.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| NFJ01_RS21760 (NFJ01_21760) | - | 4539177..4541435 (-) | 2259 | WP_252687060.1 | FAD-dependent oxidoreductase | - |
| NFJ01_RS21765 (NFJ01_21765) | - | 4541503..4542195 (+) | 693 | WP_252687062.1 | IclR family transcriptional regulator | - |
| NFJ01_RS21770 (NFJ01_21770) | ruvX | 4542313..4542729 (-) | 417 | WP_059177575.1 | Holliday junction resolvase RuvX | - |
| NFJ01_RS21775 (NFJ01_21775) | - | 4542729..4543289 (-) | 561 | WP_252687064.1 | YqgE/AlgH family protein | - |
Sequence
Protein
Download Length: 326 a.a. Molecular weight: 35647.57 Da Isoelectric Point: 5.9879
>NTDB_id=700325 NFJ01_RS21755 WP_252687057.1 4538200..4539180(+) (pilT) [Lelliottia amnigena strain P13]
MDMEEIVALSVKHNVSDLHLCSNSPPRWRRLGHLESAPFPAPDVQLLLKAWLNDEQEGAWWANGQVDFAVSMNSGQRLRA
SAFNQIHGTSITLRLLPVTCPTLSELTAPRVIPDLLSSDNGLILVTGATGSGKSTTLAAMVDHLNSHCDGHILTLEDPVE
FIYQSNRCLIQQREIGLHCPSFSQALRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGASQAIERLVDT
FPAEEKDPVRNQLAGSLRAVLAQKLERDAQGGRVALFEMLVNTPASANLIREGKTWQLPGIIQTGQQAGMQNFDQSLAER
KAQGRL
MDMEEIVALSVKHNVSDLHLCSNSPPRWRRLGHLESAPFPAPDVQLLLKAWLNDEQEGAWWANGQVDFAVSMNSGQRLRA
SAFNQIHGTSITLRLLPVTCPTLSELTAPRVIPDLLSSDNGLILVTGATGSGKSTTLAAMVDHLNSHCDGHILTLEDPVE
FIYQSNRCLIQQREIGLHCPSFSQALRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGASQAIERLVDT
FPAEEKDPVRNQLAGSLRAVLAQKLERDAQGGRVALFEMLVNTPASANLIREGKTWQLPGIIQTGQQAGMQNFDQSLAER
KAQGRL
Nucleotide
Download Length: 981 bp
>NTDB_id=700325 NFJ01_RS21755 WP_252687057.1 4538200..4539180(+) (pilT) [Lelliottia amnigena strain P13]
ATGGATATGGAAGAAATTGTGGCCCTTAGTGTAAAGCATAATGTCTCGGATCTACACCTGTGCAGCAATTCACCACCGCG
CTGGCGTCGTTTGGGTCATCTTGAATCTGCACCTTTTCCCGCCCCGGATGTTCAGCTGCTCCTTAAAGCCTGGCTCAACG
ACGAGCAGGAGGGGGCATGGTGGGCGAATGGGCAGGTGGATTTCGCCGTATCGATGAACAGCGGGCAACGTTTGCGCGCC
AGCGCATTTAACCAAATTCATGGTACCTCGATAACGCTCAGATTATTGCCAGTGACCTGTCCAACGCTGTCAGAGCTTAC
GGCACCTAGAGTCATCCCCGATCTACTTTCCAGTGACAACGGGTTGATTCTGGTCACCGGCGCCACTGGCAGCGGAAAAT
CCACCACGCTGGCGGCGATGGTGGATCATCTCAATAGCCATTGCGACGGGCATATTCTTACTCTTGAAGATCCGGTGGAG
TTTATTTATCAAAGCAATCGCTGTCTGATTCAACAGCGAGAAATTGGCCTGCACTGCCCTTCCTTTTCTCAGGCGCTACG
TGCGGCACTACGTGAAGATCCCGACGTCATTTTGCTGGGCGAATTGCGGGATAGCGAAACGATCCGCCTCGCGCTAACGG
CTGCAGAAACCGGGCATCTGGTGTTGGCGACGCTGCATACCCGAGGTGCGTCTCAGGCCATCGAACGGCTGGTGGATACT
TTTCCTGCCGAGGAAAAAGATCCTGTAAGAAACCAGCTGGCGGGGAGCTTGCGCGCGGTACTGGCGCAAAAGCTAGAGCG
TGACGCGCAGGGCGGGCGAGTGGCGCTTTTCGAAATGCTGGTGAACACGCCTGCATCCGCGAATCTCATTCGTGAGGGGA
AAACCTGGCAACTGCCCGGCATCATTCAAACCGGGCAGCAGGCAGGGATGCAAAACTTTGACCAAAGCCTGGCCGAACGC
AAGGCGCAGGGACGGCTCTAG
ATGGATATGGAAGAAATTGTGGCCCTTAGTGTAAAGCATAATGTCTCGGATCTACACCTGTGCAGCAATTCACCACCGCG
CTGGCGTCGTTTGGGTCATCTTGAATCTGCACCTTTTCCCGCCCCGGATGTTCAGCTGCTCCTTAAAGCCTGGCTCAACG
ACGAGCAGGAGGGGGCATGGTGGGCGAATGGGCAGGTGGATTTCGCCGTATCGATGAACAGCGGGCAACGTTTGCGCGCC
AGCGCATTTAACCAAATTCATGGTACCTCGATAACGCTCAGATTATTGCCAGTGACCTGTCCAACGCTGTCAGAGCTTAC
GGCACCTAGAGTCATCCCCGATCTACTTTCCAGTGACAACGGGTTGATTCTGGTCACCGGCGCCACTGGCAGCGGAAAAT
CCACCACGCTGGCGGCGATGGTGGATCATCTCAATAGCCATTGCGACGGGCATATTCTTACTCTTGAAGATCCGGTGGAG
TTTATTTATCAAAGCAATCGCTGTCTGATTCAACAGCGAGAAATTGGCCTGCACTGCCCTTCCTTTTCTCAGGCGCTACG
TGCGGCACTACGTGAAGATCCCGACGTCATTTTGCTGGGCGAATTGCGGGATAGCGAAACGATCCGCCTCGCGCTAACGG
CTGCAGAAACCGGGCATCTGGTGTTGGCGACGCTGCATACCCGAGGTGCGTCTCAGGCCATCGAACGGCTGGTGGATACT
TTTCCTGCCGAGGAAAAAGATCCTGTAAGAAACCAGCTGGCGGGGAGCTTGCGCGCGGTACTGGCGCAAAAGCTAGAGCG
TGACGCGCAGGGCGGGCGAGTGGCGCTTTTCGAAATGCTGGTGAACACGCCTGCATCCGCGAATCTCATTCGTGAGGGGA
AAACCTGGCAACTGCCCGGCATCATTCAAACCGGGCAGCAGGCAGGGATGCAAAACTTTGACCAAAGCCTGGCCGAACGC
AAGGCGCAGGGACGGCTCTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.