Detailed information NTG0676035

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG329_RS29435
• Genome accession: NZ_CP109422
• Coordinates: 6595471..6596763 (+)
• Length: 430 a.a.
• NCBI ID: WP_405799430.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_01506
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 6590471..6601763

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG329_RS29400 (OG329_29390)	-	6591288..6591482 (+)	195	WP_405799426.1	hypothetical protein	-
OG329_RS29405 (OG329_29395)	-	6591504..6591689 (+)	186	WP_405799427.1	hypothetical protein	-
OG329_RS29420 (OG329_29410)	tig	6592275..6593699 (+)	1425	WP_405799428.1	trigger factor	-
OG329_RS29425 (OG329_29415)	clpP	6593979..6594584 (+)	606	WP_405802086.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG329_RS29430 (OG329_29420)	clpP	6594637..6595323 (+)	687	WP_405799429.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG329_RS29435 (OG329_29425)	clpX	6595471..6596763 (+)	1293	WP_405799430.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG329_RS29440 (OG329_29430)	-	6596842..6597837 (-)	996	WP_405799431.1	hypothetical protein	-
OG329_RS29445 (OG329_29435)	-	6597974..6600595 (+)	2622	WP_405799432.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 430 a.a.
• Molecular weight: 46996.90 Da
• Isoelectric Point: 4.8852

>NTDB_id=676035 OG329_RS29435 WP_405799430.1 6595471..6596763(+) (clpX) [Streptomyces sp. NBC_01506]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQAP
AKKALSVAVYNHYKRVQAGESGGGGSREDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKIIESRAGAKGIGFGATIRSKREIEESDQFQEVMPEDLVKFGMIPEFIGRLPVLTSVHNLDR
EALLKILVEPRNALVKQYQRLFELDGVELDFDLPALEAIADQAILRGTGARGLRAILEEVLQSVMYEVPSRKDVARVVIT
ADVVRNNVNPTLVPREPRIVKNDGRHEKSA

Nucleotide

• Length: 1293 bp

>NTDB_id=676035 OG329_RS29435 WP_405799430.1 6595471..6596763(+) (clpX) [Streptomyces sp. NBC_01506]
GTGGCACGCATCGGTGATGGCGGCGACCTGCTCAAGTGCTCGTTCTGCGGGAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCAGGTCCCGGGGTCTATATCTGCGACGAGTGCATCGACCTCTGCAATGAGATCATCGAGGAGGAGCTTGCCGAGACCT
CCGAGGTGCGGTGGGAGGAACTGCCCAAGCCGCGGGAGATCTACGAGTTCCTCGAGGGTTACGTCGTCGGGCAGGCGCCC
GCGAAGAAGGCCCTGTCGGTAGCGGTGTACAACCACTACAAGCGCGTGCAGGCCGGCGAGAGCGGCGGCGGCGGAAGCCG
TGAGGACGCGATCGAGCTCGCCAAGTCCAACATCCTGCTGCTGGGCCCCACGGGCTCCGGCAAGACGCTCCTCGCGCAGA
CGCTGGCCCGGATGCTGAACGTACCGTTCGCGATCGCGGACGCGACGGCGCTGACGGAGGCCGGCTATGTCGGCGAGGAC
GTCGAGAACATTCTGCTCAAGCTGATCCAGGCGGCCGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGCAAGAGCGAGAACCCGTCGATCACCCGCGATGTCTCCGGCGAGGGCGTCCAGCAGGCCC
TGCTGAAGATCCTGGAGGGCACCACCGCCTCCGTACCGCCGCAGGGCGGACGCAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTGTTCATCGTGGGCGGCGCGTTCGCGGGTCTGGAGAAGATCATCGAGTCACGGGCCGGTGC
CAAGGGCATCGGCTTCGGCGCGACGATCCGCTCCAAGCGCGAGATCGAGGAGAGCGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCCGAGTTCATCGGCCGGCTGCCGGTCCTGACCTCGGTGCACAACCTGGACCGC
GAAGCGCTCCTGAAGATCCTGGTCGAGCCGCGTAACGCGCTGGTGAAGCAGTATCAGCGGCTGTTCGAACTCGACGGTGT
GGAGCTGGACTTCGACCTCCCGGCGCTCGAAGCCATCGCCGACCAGGCGATCCTGCGCGGCACGGGCGCACGCGGACTGC
GCGCGATCCTGGAGGAAGTCCTCCAGTCGGTGATGTACGAGGTTCCGTCCCGCAAGGACGTCGCCCGGGTGGTCATCACG
GCGGACGTCGTGCGCAACAACGTCAACCCGACGCTGGTCCCGCGCGAGCCGCGGATCGTGAAGAACGACGGCCGCCACGA
GAAGTCGGCGTAG

Domains

Predicted by InterProScan.

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-311)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.93	93.488	0.598
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	53.155	95.814	0.509