Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | LEN_RS18515 | Genome accession | NZ_AP014940 |
| Coordinates | 4620002..4621039 (-) | Length | 345 a.a. |
| NCBI ID | WP_074864167.1 | Uniprot ID | A0AAU9B507 |
| Organism | Lysobacter enzymogenes strain M497-1 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 4615002..4626039
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LEN_RS18510 (LEN_3748) | pilU | 4618720..4619886 (-) | 1167 | WP_096379613.1 | PilT/PilU family type 4a pilus ATPase | Machinery gene |
| LEN_RS18515 (LEN_3749) | pilT | 4620002..4621039 (-) | 1038 | WP_074864167.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| LEN_RS18520 (LEN_3750) | - | 4621274..4621936 (+) | 663 | WP_232518547.1 | YggS family pyridoxal phosphate-dependent enzyme | - |
| LEN_RS18525 (LEN_3751) | - | 4621933..4622490 (+) | 558 | WP_096379616.1 | hypothetical protein | - |
| LEN_RS18530 (LEN_3752) | proC | 4622514..4623356 (+) | 843 | WP_096379618.1 | pyrroline-5-carboxylate reductase | - |
| LEN_RS18535 (LEN_3753) | - | 4623353..4623835 (+) | 483 | WP_096379620.1 | DUF4426 domain-containing protein | - |
| LEN_RS18540 (LEN_3754) | - | 4623940..4624944 (-) | 1005 | WP_096379622.1 | lipase secretion chaperone | - |
| LEN_RS18545 (LEN_3755) | - | 4624948..4625892 (-) | 945 | WP_096379624.1 | triacylglycerol lipase | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 38542.38 Da Isoelectric Point: 6.7272
>NTDB_id=67459 LEN_RS18515 WP_074864167.1 4620002..4621039(-) (pilT) [Lysobacter enzymogenes strain M497-1]
MDIAELLAFSVKNKASDLHLSAGLPPMIRVDGDVRRINIPALDHKQVHALVYDIMSDKQRRDFEEFLEVDFSFEIPGLAR
FRVNAFNQNRGAGAVFRTIPSEVLTLEDLGCPPIFRQLIEQPQGLILVTGPTGSGKSTTLAAMIDHINKSEYAHILSVED
PIEFVHTSQKCLINQREVHRDTHGFNEALRSALREDPDYILVGELRDLETIRLALTAAETGHLVFGTLHTSSAAKTVDRI
IDVFPAGEKPMVRSMLSESLRAVISQALLKKVGGGRTAAWEIMVGIPAIRNLIREDKVAQMYSAIQTGQNFGMMTLDQHL
QDLVKRGLILRPQAREYAKDKRLFE
MDIAELLAFSVKNKASDLHLSAGLPPMIRVDGDVRRINIPALDHKQVHALVYDIMSDKQRRDFEEFLEVDFSFEIPGLAR
FRVNAFNQNRGAGAVFRTIPSEVLTLEDLGCPPIFRQLIEQPQGLILVTGPTGSGKSTTLAAMIDHINKSEYAHILSVED
PIEFVHTSQKCLINQREVHRDTHGFNEALRSALREDPDYILVGELRDLETIRLALTAAETGHLVFGTLHTSSAAKTVDRI
IDVFPAGEKPMVRSMLSESLRAVISQALLKKVGGGRTAAWEIMVGIPAIRNLIREDKVAQMYSAIQTGQNFGMMTLDQHL
QDLVKRGLILRPQAREYAKDKRLFE
Nucleotide
Download Length: 1038 bp
>NTDB_id=67459 LEN_RS18515 WP_074864167.1 4620002..4621039(-) (pilT) [Lysobacter enzymogenes strain M497-1]
ATGGATATCGCCGAACTTCTGGCGTTTTCGGTAAAGAACAAAGCATCCGACTTGCATCTTTCGGCCGGCTTGCCGCCGAT
GATCCGGGTCGACGGCGACGTGCGCCGGATCAACATCCCGGCCCTGGACCACAAGCAGGTGCACGCGCTGGTCTACGACA
TCATGTCGGACAAGCAGCGGCGCGACTTCGAAGAGTTCCTGGAAGTCGACTTCTCCTTCGAGATCCCCGGCCTGGCGCGC
TTCCGCGTCAACGCCTTCAACCAGAACCGCGGCGCCGGCGCGGTGTTCCGTACCATTCCTTCCGAGGTGCTGACCCTCGA
AGACCTGGGCTGTCCGCCGATCTTCCGCCAGCTGATCGAGCAGCCGCAGGGCCTGATCCTGGTGACCGGGCCGACCGGCT
CGGGCAAGTCGACCACGCTGGCGGCGATGATCGACCACATCAACAAGAGCGAGTACGCGCACATCCTCTCGGTCGAAGAC
CCGATCGAGTTCGTGCACACCTCGCAGAAGTGCCTGATCAACCAGCGCGAAGTCCACCGCGACACCCACGGCTTCAACGA
GGCCCTGCGCTCGGCGCTGCGCGAAGACCCCGACTACATCCTCGTGGGCGAGTTGCGCGACCTGGAAACCATCCGCCTGG
CGCTGACCGCCGCGGAAACCGGCCACTTGGTGTTCGGCACCCTGCACACCTCGTCGGCGGCCAAGACCGTGGACCGCATC
ATCGACGTGTTCCCCGCCGGCGAAAAGCCGATGGTGCGCTCGATGCTGTCGGAATCGCTGCGCGCGGTGATCTCGCAGGC
GCTGCTGAAGAAGGTCGGCGGCGGCCGTACCGCGGCCTGGGAAATCATGGTCGGCATCCCCGCCATCCGCAACCTGATCC
GCGAGGACAAGGTCGCGCAGATGTATTCGGCGATCCAGACCGGCCAGAACTTCGGCATGATGACTCTGGACCAGCACCTG
CAAGACCTGGTCAAGCGCGGCCTGATCCTGCGCCCGCAGGCCCGCGAGTACGCCAAGGACAAGCGTCTGTTCGAATGA
ATGGATATCGCCGAACTTCTGGCGTTTTCGGTAAAGAACAAAGCATCCGACTTGCATCTTTCGGCCGGCTTGCCGCCGAT
GATCCGGGTCGACGGCGACGTGCGCCGGATCAACATCCCGGCCCTGGACCACAAGCAGGTGCACGCGCTGGTCTACGACA
TCATGTCGGACAAGCAGCGGCGCGACTTCGAAGAGTTCCTGGAAGTCGACTTCTCCTTCGAGATCCCCGGCCTGGCGCGC
TTCCGCGTCAACGCCTTCAACCAGAACCGCGGCGCCGGCGCGGTGTTCCGTACCATTCCTTCCGAGGTGCTGACCCTCGA
AGACCTGGGCTGTCCGCCGATCTTCCGCCAGCTGATCGAGCAGCCGCAGGGCCTGATCCTGGTGACCGGGCCGACCGGCT
CGGGCAAGTCGACCACGCTGGCGGCGATGATCGACCACATCAACAAGAGCGAGTACGCGCACATCCTCTCGGTCGAAGAC
CCGATCGAGTTCGTGCACACCTCGCAGAAGTGCCTGATCAACCAGCGCGAAGTCCACCGCGACACCCACGGCTTCAACGA
GGCCCTGCGCTCGGCGCTGCGCGAAGACCCCGACTACATCCTCGTGGGCGAGTTGCGCGACCTGGAAACCATCCGCCTGG
CGCTGACCGCCGCGGAAACCGGCCACTTGGTGTTCGGCACCCTGCACACCTCGTCGGCGGCCAAGACCGTGGACCGCATC
ATCGACGTGTTCCCCGCCGGCGAAAAGCCGATGGTGCGCTCGATGCTGTCGGAATCGCTGCGCGCGGTGATCTCGCAGGC
GCTGCTGAAGAAGGTCGGCGGCGGCCGTACCGCGGCCTGGGAAATCATGGTCGGCATCCCCGCCATCCGCAACCTGATCC
GCGAGGACAAGGTCGCGCAGATGTATTCGGCGATCCAGACCGGCCAGAACTTCGGCATGATGACTCTGGACCAGCACCTG
CAAGACCTGGTCAAGCGCGGCCTGATCCTGCGCCCGCAGGCCCGCGAGTACGCCAAGGACAAGCGTCTGTTCGAATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Acinetobacter nosocomialis M2 |
79.36 |
99.71 |
0.791 |
| pilT | Acinetobacter baumannii D1279779 |
79.36 |
99.71 |
0.791 |
| pilT | Acinetobacter baumannii strain A118 |
79.36 |
99.71 |
0.791 |
| pilT | Pseudomonas stutzeri DSM 10701 |
78.198 |
99.71 |
0.78 |
| pilT | Acinetobacter baylyi ADP1 |
77.907 |
99.71 |
0.777 |
| pilT | Pseudomonas aeruginosa PAK |
78.466 |
98.261 |
0.771 |
| pilT | Legionella pneumophila strain Lp02 |
73.837 |
99.71 |
0.736 |
| pilT | Legionella pneumophila strain ERS1305867 |
73.837 |
99.71 |
0.736 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
69.909 |
95.362 |
0.667 |
| pilT | Vibrio cholerae strain A1552 |
69.909 |
95.362 |
0.667 |
| pilT | Neisseria meningitidis 8013 |
66.276 |
98.841 |
0.655 |
| pilT | Neisseria gonorrhoeae MS11 |
65.789 |
99.13 |
0.652 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
49.565 |
100 |
0.496 |
| pilU | Pseudomonas stutzeri DSM 10701 |
40.413 |
98.261 |
0.397 |
| pilU | Acinetobacter baylyi ADP1 |
39.706 |
98.551 |
0.391 |
| pilU | Vibrio cholerae strain A1552 |
40.615 |
94.203 |
0.383 |