Detailed information NTG0067289

Bioinformatically predicted

Overview

• Name: comR/comR2
• Type: Regulator
• Locus tag: SITYG_RS09350
• Genome accession: NZ_AP014880
• Coordinates: 1838590..1839063 (-)
• Length: 157 a.a.
• NCBI ID: WP_096362333.1
• Uniprot ID: -
• Organism: Streptococcus intermedius strain TYG1620
• Function: activate transcription of late competence genes (predicted from homology) Competence regulation

Genomic Context

Location: 1833590..1844063

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SITYG_RS09350 (SITYG_18370)	comR/comR2	1838590..1839063 (-)	474	WP_096362333.1	transcriptional regulator	Regulator
SITYG_RS09360 (SITYG_18380)	rplQ	1839993..1840379 (-)	387	WP_003075160.1	50S ribosomal protein L17	-
SITYG_RS09365 (SITYG_18390)	-	1840391..1841329 (-)	939	WP_003077134.1	DNA-directed RNA polymerase subunit alpha	-
SITYG_RS09370 (SITYG_18400)	rpsK	1841374..1841757 (-)	384	WP_001118385.1	30S ribosomal protein S11	-
SITYG_RS09375 (SITYG_18410)	rpsM	1841777..1842142 (-)	366	WP_002262317.1	30S ribosomal protein S13	-
SITYG_RS09380 (SITYG_18420)	rpmJ	1842158..1842274 (-)	117	WP_001808836.1	50S ribosomal protein L36	-
SITYG_RS09385 (SITYG_18430)	infA	1842299..1842517 (-)	219	WP_001029883.1	translation initiation factor IF-1	-
SITYG_RS09390 (SITYG_18440)	-	1842633..1843271 (-)	639	WP_009569575.1	adenylate kinase	-

Sequence

Protein

• Length: 157 a.a.
• Molecular weight: 19402.35 Da
• Isoelectric Point: 8.9104

>NTDB_id=67289 SITYG_RS09350 WP_096362333.1 1838590..1839063(-) (comR/comR2) [Streptococcus intermedius strain TYG1620]
MDFKELYEKVRGIVLKSRREYYVHLWELSDWDQEGMMVLYELVSRHPYLVEEEAHLYVYYKTKFRNHIKDILRKQESQKR
KLDRQVYEEVSEIGHKLSLKGLYLDELVILRDQLKSYQKQLSPAKQEQYERLLADERFKGRQAMLRELRTYLKDYEM

Nucleotide

• Length: 474 bp

>NTDB_id=67289 SITYG_RS09350 WP_096362333.1 1838590..1839063(-) (comR/comR2) [Streptococcus intermedius strain TYG1620]
ATGGATTTCAAGGAGTTATATGAGAAAGTAAGGGGAATTGTGCTGAAGAGTCGACGGGAATATTATGTCCATCTGTGGGA
GCTAAGCGATTGGGACCAAGAAGGGATGATGGTCTTGTATGAGTTGGTAAGTCGCCACCCCTATTTGGTAGAGGAAGAAG
CCCATCTCTATGTCTACTATAAGACAAAGTTTCGGAATCACATAAAGGATATTCTGCGCAAACAAGAAAGTCAAAAGCGC
AAACTGGATCGCCAAGTGTATGAAGAGGTAAGTGAGATTGGGCACAAGTTAAGTCTGAAAGGTCTGTATCTAGACGAGTT
GGTAATACTCCGCGATCAATTAAAGTCCTATCAAAAGCAACTGAGTCCCGCCAAGCAAGAGCAGTATGAGCGGTTACTGG
CAGATGAAAGGTTCAAAGGCCGCCAAGCGATGCTTCGAGAGTTACGAACCTACTTAAAAGACTATGAGATGTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comR/comR1	Streptococcus gordonii str. Challis substr. CH1	60	98.726	0.592
comR/comR2	Streptococcus gordonii str. Challis substr. CH1	60	98.726	0.592
comX/sigX/comX2/sigX2	Streptococcus mitis NCTC 12261	56.129	98.726	0.554
comX/sigX/comX2/sigX2	Streptococcus mitis SK321	55.484	98.726	0.548
comX/sigX/comX1/sigX1	Streptococcus mitis SK321	54.839	98.726	0.541
comX/sigX/comX1/sigX1	Streptococcus mitis NCTC 12261	54.839	98.726	0.541
comX/comX1	Streptococcus pneumoniae Rx1	54.194	98.726	0.535
comX/comX2	Streptococcus pneumoniae D39	54.194	98.726	0.535
comX/comX1	Streptococcus pneumoniae D39	54.194	98.726	0.535
comX/comX2	Streptococcus pneumoniae R6	54.194	98.726	0.535
comX/comX1	Streptococcus pneumoniae R6	54.194	98.726	0.535
comX/comX2	Streptococcus pneumoniae Rx1	54.194	98.726	0.535
comX/comX1	Streptococcus pneumoniae TIGR4	53.548	98.726	0.529
comX/comX2	Streptococcus pneumoniae TIGR4	53.548	98.726	0.529
comX/sigX	Streptococcus mutans UA159	50.649	98.089	0.497
comX/sigX	Streptococcus suis D9	49.032	98.726	0.484
comX/sigX	Streptococcus suis isolate S10	49.032	98.726	0.484
comX/sigX	Streptococcus suis P1/7	49.032	98.726	0.484
comX/sigX/comX2/sigX2	Streptococcus pyogenes MGAS8232	43.226	98.726	0.427
comX/sigX/comX1/sigX1	Streptococcus pyogenes MGAS8232	43.226	98.726	0.427
comX/sigX/comX1/sigX1	Streptococcus pyogenes JRS4	43.226	98.726	0.427
comX/sigX/comX2/sigX2	Streptococcus pyogenes MGAS315	43.226	98.726	0.427
comX/sigX/comX1/sigX1	Streptococcus pyogenes MGAS315	43.226	98.726	0.427
comX/sigX/comX2/sigX2	Streptococcus pyogenes JRS4	43.226	98.726	0.427
comX	Streptococcus salivarius SK126	42.857	98.089	0.42
comX/sigX	Streptococcus salivarius strain HSISS4	42.208	98.089	0.414
comX	Streptococcus thermophilus LMG 18311	42.208	98.089	0.414
comX	Streptococcus thermophilus LMD-9	42.208	98.089	0.414
comX/sigX	Streptococcus infantarius subsp. infantarius ATCC BAA-102	39.744	99.363	0.395