Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | MRY16_RS04270 | Genome accession | NZ_CP094445 |
| Coordinates | 898133..899170 (-) | Length | 345 a.a. |
| NCBI ID | WP_004960020.1 | Uniprot ID | - |
| Organism | Acinetobacter junii strain A2-1 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 893133..904170
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MRY16_RS04240 (MRY16_04240) | - | 893793..894248 (+) | 456 | WP_004913914.1 | bacteriohemerythrin | - |
| MRY16_RS04245 (MRY16_04245) | - | 894487..895566 (+) | 1080 | WP_243484266.1 | hypothetical protein | - |
| MRY16_RS04250 (MRY16_04250) | - | 895566..895889 (+) | 324 | WP_243484267.1 | RnfH family protein | - |
| MRY16_RS04255 (MRY16_04255) | bamE | 895945..896343 (-) | 399 | WP_004913908.1 | outer membrane protein assembly factor BamE | - |
| MRY16_RS04260 (MRY16_04260) | fur | 896455..896892 (+) | 438 | WP_004952725.1 | ferric iron uptake transcriptional regulator | - |
| MRY16_RS04265 (MRY16_04265) | pilU | 896989..898107 (-) | 1119 | WP_004913902.1 | PilT/PilU family type 4a pilus ATPase | Machinery gene |
| MRY16_RS04270 (MRY16_04270) | pilT | 898133..899170 (-) | 1038 | WP_004960020.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| MRY16_RS04275 (MRY16_04275) | - | 899298..899984 (+) | 687 | WP_243484269.1 | YggS family pyridoxal phosphate-dependent enzyme | - |
| MRY16_RS04280 (MRY16_04280) | - | 899981..903577 (-) | 3597 | WP_243484270.1 | AAA family ATPase | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 38437.01 Da Isoelectric Point: 6.4330
>NTDB_id=669536 MRY16_RS04270 WP_004960020.1 898133..899170(-) (pilT) [Acinetobacter junii strain A2-1]
MDITELLAFSVKNGASDLHLSAGMPPMIRVDGEVRRINLPALEHKDVHRLVYDIMNDKQRRDYEEDLETDFSFEVPNIAR
FRVNAFNQNRGAGAVFRTIPSKVLTMEDLGLGTIFKDICDYPRGIVLVTGPTGSGKSTTLAAMIDYINEHRYDHILTVED
PIEFVHQSKKCLINQREVHRDTHGFNEALRSALREDPDIILVGEMRDLETIRLALTAAETGHLVFGTLHTTSAAKTIDRV
IDVFPAEEKDMVRAMLSESLQAVISQTLLKKNGGGRVAAHEIMIGIPAIRNLVRENKVAQMYSAIQTGANYGMTTLDQSL
KNLVSRGIISPQTARTVAKQPESFL
MDITELLAFSVKNGASDLHLSAGMPPMIRVDGEVRRINLPALEHKDVHRLVYDIMNDKQRRDYEEDLETDFSFEVPNIAR
FRVNAFNQNRGAGAVFRTIPSKVLTMEDLGLGTIFKDICDYPRGIVLVTGPTGSGKSTTLAAMIDYINEHRYDHILTVED
PIEFVHQSKKCLINQREVHRDTHGFNEALRSALREDPDIILVGEMRDLETIRLALTAAETGHLVFGTLHTTSAAKTIDRV
IDVFPAEEKDMVRAMLSESLQAVISQTLLKKNGGGRVAAHEIMIGIPAIRNLVRENKVAQMYSAIQTGANYGMTTLDQSL
KNLVSRGIISPQTARTVAKQPESFL
Nucleotide
Download Length: 1038 bp
>NTDB_id=669536 MRY16_RS04270 WP_004960020.1 898133..899170(-) (pilT) [Acinetobacter junii strain A2-1]
ATGGATATTACAGAATTACTCGCGTTTTCAGTAAAAAACGGTGCTTCGGACTTACACCTTTCAGCGGGTATGCCACCAAT
GATTCGCGTGGATGGTGAAGTTCGCCGTATCAATTTACCAGCATTAGAACATAAAGATGTACACCGTTTAGTGTACGACA
TTATGAATGATAAACAACGTCGAGATTACGAAGAAGATCTAGAAACGGACTTTTCATTTGAAGTACCAAACATTGCTCGT
TTCCGTGTAAACGCATTTAACCAAAACCGTGGTGCAGGTGCTGTATTTCGTACCATTCCATCTAAAGTCTTAACCATGGA
AGACTTGGGTTTAGGAACAATTTTCAAAGATATTTGTGACTACCCGCGTGGTATAGTTCTGGTCACTGGTCCAACGGGTT
CAGGTAAATCAACGACATTGGCTGCAATGATTGATTATATTAATGAGCATCGTTATGACCATATTTTAACGGTTGAAGAC
CCAATCGAATTTGTACATCAATCAAAGAAATGTTTGATTAACCAGCGTGAAGTGCATCGTGATACACATGGCTTTAACGA
AGCACTTCGTTCAGCCCTTCGTGAAGACCCTGATATTATCCTAGTCGGTGAGATGCGTGACCTAGAGACAATTCGTCTTG
CTCTAACCGCAGCAGAAACAGGTCACTTAGTATTTGGTACTCTGCATACCACCTCAGCAGCAAAAACGATTGACCGTGTG
ATCGACGTATTCCCTGCCGAAGAAAAAGATATGGTTCGCGCGATGTTGTCCGAATCATTACAAGCAGTTATTTCACAAAC
ATTGTTGAAAAAGAATGGCGGTGGTCGTGTTGCAGCGCATGAGATCATGATCGGTATTCCTGCGATTCGTAACCTTGTTC
GTGAAAACAAAGTTGCACAGATGTACTCTGCGATTCAGACAGGTGCTAACTACGGCATGACCACACTCGATCAAAGTCTT
AAAAACTTAGTTTCGAGAGGCATCATTAGCCCTCAAACAGCTCGTACTGTTGCTAAACAACCTGAATCATTCCTATAA
ATGGATATTACAGAATTACTCGCGTTTTCAGTAAAAAACGGTGCTTCGGACTTACACCTTTCAGCGGGTATGCCACCAAT
GATTCGCGTGGATGGTGAAGTTCGCCGTATCAATTTACCAGCATTAGAACATAAAGATGTACACCGTTTAGTGTACGACA
TTATGAATGATAAACAACGTCGAGATTACGAAGAAGATCTAGAAACGGACTTTTCATTTGAAGTACCAAACATTGCTCGT
TTCCGTGTAAACGCATTTAACCAAAACCGTGGTGCAGGTGCTGTATTTCGTACCATTCCATCTAAAGTCTTAACCATGGA
AGACTTGGGTTTAGGAACAATTTTCAAAGATATTTGTGACTACCCGCGTGGTATAGTTCTGGTCACTGGTCCAACGGGTT
CAGGTAAATCAACGACATTGGCTGCAATGATTGATTATATTAATGAGCATCGTTATGACCATATTTTAACGGTTGAAGAC
CCAATCGAATTTGTACATCAATCAAAGAAATGTTTGATTAACCAGCGTGAAGTGCATCGTGATACACATGGCTTTAACGA
AGCACTTCGTTCAGCCCTTCGTGAAGACCCTGATATTATCCTAGTCGGTGAGATGCGTGACCTAGAGACAATTCGTCTTG
CTCTAACCGCAGCAGAAACAGGTCACTTAGTATTTGGTACTCTGCATACCACCTCAGCAGCAAAAACGATTGACCGTGTG
ATCGACGTATTCCCTGCCGAAGAAAAAGATATGGTTCGCGCGATGTTGTCCGAATCATTACAAGCAGTTATTTCACAAAC
ATTGTTGAAAAAGAATGGCGGTGGTCGTGTTGCAGCGCATGAGATCATGATCGGTATTCCTGCGATTCGTAACCTTGTTC
GTGAAAACAAAGTTGCACAGATGTACTCTGCGATTCAGACAGGTGCTAACTACGGCATGACCACACTCGATCAAAGTCTT
AAAAACTTAGTTTCGAGAGGCATCATTAGCCCTCAAACAGCTCGTACTGTTGCTAAACAACCTGAATCATTCCTATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Acinetobacter nosocomialis M2 |
97.101 |
100 |
0.971 |
| pilT | Acinetobacter baumannii D1279779 |
96.812 |
100 |
0.968 |
| pilT | Acinetobacter baumannii strain A118 |
96.812 |
100 |
0.968 |
| pilT | Acinetobacter baylyi ADP1 |
88.372 |
99.71 |
0.881 |
| pilT | Pseudomonas aeruginosa PAK |
82.849 |
99.71 |
0.826 |
| pilT | Pseudomonas stutzeri DSM 10701 |
82.558 |
99.71 |
0.823 |
| pilT | Legionella pneumophila strain Lp02 |
75.581 |
99.71 |
0.754 |
| pilT | Legionella pneumophila strain ERS1305867 |
75.581 |
99.71 |
0.754 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
70.238 |
97.391 |
0.684 |
| pilT | Vibrio cholerae strain A1552 |
70.238 |
97.391 |
0.684 |
| pilT | Neisseria meningitidis 8013 |
67.826 |
100 |
0.678 |
| pilT | Neisseria gonorrhoeae MS11 |
67.536 |
100 |
0.675 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
51.304 |
100 |
0.513 |
| pilU | Vibrio cholerae strain A1552 |
41.791 |
97.101 |
0.406 |
| pilU | Pseudomonas stutzeri DSM 10701 |
40.896 |
97.101 |
0.397 |
| pilU | Acinetobacter baylyi ADP1 |
39.017 |
100 |
0.391 |