Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OHU26_RS14265 Genome accession   NZ_CP108249
Coordinates   3244538..3245662 (+) Length   374 a.a.
NCBI ID   WP_266626819.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00069     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 3239538..3250662
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OHU26_RS14250 (OHU26_14205) - 3240216..3240965 (+) 750 WP_389874932.1 hypothetical protein -
  OHU26_RS14255 (OHU26_14210) - 3240991..3242709 (-) 1719 WP_327362004.1 BACON domain-containing protein -
  OHU26_RS14260 (OHU26_14215) radA/sms 3242881..3244284 (+) 1404 WP_266626817.1 DNA repair protein RadA Machinery gene
  OHU26_RS14265 (OHU26_14220) disA 3244538..3245662 (+) 1125 WP_266626819.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OHU26_RS14270 (OHU26_14225) - 3245684..3246472 (-) 789 WP_405706326.1 hypothetical protein -
  OHU26_RS14275 (OHU26_14230) - 3246642..3247256 (+) 615 WP_362630653.1 phosphatase PAP2 family protein -
  OHU26_RS14280 (OHU26_14235) - 3247280..3248233 (+) 954 WP_266626824.1 A/G-specific adenine glycosylase -
  OHU26_RS14285 (OHU26_14240) - 3248417..3248989 (+) 573 WP_030158464.1 SigE family RNA polymerase sigma factor -
  OHU26_RS14290 (OHU26_14245) - 3249028..3249666 (+) 639 WP_327364543.1 hypothetical protein -
  OHU26_RS14295 (OHU26_14250) cseB 3249729..3250442 (+) 714 WP_266626826.1 two-component system response regulator CseB -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40362.36 Da        Isoelectric Point: 5.0260

>NTDB_id=657310 OHU26_RS14265 WP_266626819.1 3244538..3245662(+) (disA) [Streptomyces sp. NBC_00069]
MAAKDGAAASGKSGASSKQEAMMRASLSAVAPGQPLRDGLERIVRGNTGGLIVLGMDKSVEAMCTGGFVLDVEFTATRLR
ELCKLDGALILDKDITKILRAGVQLVPDASIPTEETGTRHRTADRVSKQCGFPVVSVSQSMRLIALYVDGERRVLEESGA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELTV
GIEQERELVIRDYVPEPTAKRSRTVEEALPALDALTHPELLELGIVARALGYTGSPETLDSAVSPRGYRLLAKIPRLPGA
IIERLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=657310 OHU26_RS14265 WP_266626819.1 3244538..3245662(+) (disA) [Streptomyces sp. NBC_00069]
GTGGCAGCCAAGGACGGGGCAGCAGCATCCGGAAAGTCGGGCGCGAGCTCCAAGCAGGAGGCCATGATGCGCGCCTCGCT
GAGCGCGGTCGCACCTGGTCAGCCCCTGCGTGACGGTCTGGAACGGATCGTCCGCGGCAACACCGGCGGCCTCATCGTCC
TCGGGATGGACAAGAGCGTCGAGGCGATGTGCACGGGCGGTTTCGTCCTGGACGTGGAGTTCACCGCGACCCGGCTGCGC
GAGCTGTGCAAGCTCGACGGCGCGCTGATCCTGGACAAGGACATCACCAAGATCCTGCGGGCCGGCGTCCAGCTGGTGCC
GGACGCGTCGATCCCGACGGAGGAGACGGGCACCCGTCACCGCACCGCGGACCGCGTCTCGAAGCAGTGCGGGTTCCCCG
TGGTGTCGGTGTCGCAGTCGATGCGGTTGATCGCGCTGTACGTGGACGGGGAGCGCCGGGTCCTGGAGGAGTCCGGGGCG
ATCCTGTCGCGGGCGAACCAGGCGCTGGCCACGCTGGAGCGGTACAAGCTACGGCTCGACGAGGTCGCGGGGACGCTGTC
GGCGCTGGAGATCGAGGACCTGGTCACGGTGCGCGACGTGACGGCGGTCGCGCAGCGGCTGGAAATGGTGCGCCGCATTG
CCACGGAAATCGCTGAATACGTGGTCGAGCTGGGCACGGACGGGCGACTGCTGTCGCTCCAGCTGGACGAGCTGACGGTC
GGCATCGAGCAGGAGCGGGAGCTGGTGATCCGGGACTATGTGCCGGAGCCGACGGCGAAGCGCTCCCGCACGGTGGAGGA
GGCGCTGCCGGCGCTGGACGCGCTGACGCATCCGGAGCTGCTGGAGCTCGGGATCGTGGCGCGGGCGCTGGGGTACACGG
GCTCGCCGGAGACGCTCGACTCGGCGGTGTCCCCGCGGGGGTACCGGCTGCTGGCGAAGATTCCGCGGCTGCCGGGGGCC
ATCATCGAGCGGCTGGTGGAGCACTTCGGGGGCCTGCAGAAGCTGCTGGCCGCGTCGGTGGACGATCTGCAGACGGTCGA
CGGGGTCGGGGAAGCCCGTGCGCGCAGCGTCCGCGAGGGCCTGTCCCGCCTGGCGGAGTCCTCGATCCTCGAGCGCTACG
TCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.983

96.524

0.444