Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | MIH19_RS03060 | Genome accession | NZ_CP092289 |
| Coordinates | 643701..644735 (+) | Length | 344 a.a. |
| NCBI ID | WP_249007509.1 | Uniprot ID | - |
| Organism | Marinobacter sp. M1C | ||
| Function | type IV pilus retraction (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 638701..649735
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MIH19_RS03040 (MIH19_03040) | - | 639125..641089 (-) | 1965 | WP_249007505.1 | dynamin family protein | - |
| MIH19_RS03045 (MIH19_03045) | - | 641346..641930 (-) | 585 | WP_249007506.1 | YggT family protein | - |
| MIH19_RS03050 (MIH19_03050) | proC | 641956..642786 (-) | 831 | WP_249007507.1 | pyrroline-5-carboxylate reductase | - |
| MIH19_RS03055 (MIH19_03055) | - | 642860..643564 (-) | 705 | WP_249007508.1 | YggS family pyridoxal phosphate-dependent enzyme | - |
| MIH19_RS03060 (MIH19_03060) | pilT | 643701..644735 (+) | 1035 | WP_249007509.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| MIH19_RS03065 (MIH19_03065) | pilU | 644809..645930 (+) | 1122 | WP_249007510.1 | PilT/PilU family type 4a pilus ATPase | Machinery gene |
| MIH19_RS03070 (MIH19_03070) | - | 646048..647478 (+) | 1431 | WP_249007511.1 | outer membrane protein transport protein | - |
Sequence
Protein
Download Length: 344 a.a. Molecular weight: 38105.90 Da Isoelectric Point: 6.7245
>NTDB_id=656555 MIH19_RS03060 WP_249007509.1 643701..644735(+) (pilT) [Marinobacter sp. M1C]
MDITELLAFSAKQGASDLHLSAGLPPMIRVDGDVRRINLPPLPHKEVHGLIYDIMNDKQRKDYEEFLETDFSFEVAGVAR
FRVNAFNQNRGSGAVFRTIPSKVLSMEDLGMGQVFKDICAVPRGLVLVTGPTGSGKSTTLAAMVDHINDHRYEHILTIED
PIEFVHESKKCLVNQREVHRDTLGFNEALRSALREDPDIILVGELRDLETIRLALTAAETGHLVFGTLHTTSAAKTIDRV
VDVFPAQEKSMVRSMLSESLQAVISQTLMKKMGGGRIAAHEIMIGTSAIRNLIREDKIAQMYSSIQTGGSLGMQTLDQCL
ERLLQKGLISRDQARLKAKMPDAF
MDITELLAFSAKQGASDLHLSAGLPPMIRVDGDVRRINLPPLPHKEVHGLIYDIMNDKQRKDYEEFLETDFSFEVAGVAR
FRVNAFNQNRGSGAVFRTIPSKVLSMEDLGMGQVFKDICAVPRGLVLVTGPTGSGKSTTLAAMVDHINDHRYEHILTIED
PIEFVHESKKCLVNQREVHRDTLGFNEALRSALREDPDIILVGELRDLETIRLALTAAETGHLVFGTLHTTSAAKTIDRV
VDVFPAQEKSMVRSMLSESLQAVISQTLMKKMGGGRIAAHEIMIGTSAIRNLIREDKIAQMYSSIQTGGSLGMQTLDQCL
ERLLQKGLISRDQARLKAKMPDAF
Nucleotide
Download Length: 1035 bp
>NTDB_id=656555 MIH19_RS03060 WP_249007509.1 643701..644735(+) (pilT) [Marinobacter sp. M1C]
ATGGATATTACCGAACTGCTTGCCTTTTCGGCGAAACAGGGCGCTTCAGACTTGCACCTTTCTGCTGGCTTGCCGCCGAT
GATTCGTGTGGACGGTGATGTACGCCGTATTAACCTGCCTCCTTTGCCACATAAGGAAGTGCACGGTCTGATTTACGACA
TCATGAATGACAAGCAGCGTAAAGACTACGAAGAGTTTTTGGAAACCGATTTCTCGTTCGAAGTGGCCGGGGTTGCCCGT
TTCCGGGTTAACGCCTTTAACCAGAATCGCGGTTCCGGTGCGGTGTTCCGGACGATCCCCTCGAAAGTGCTGTCCATGGA
AGACCTAGGCATGGGACAGGTGTTCAAAGACATTTGCGCGGTGCCACGGGGGTTGGTTCTGGTAACCGGGCCCACCGGTT
CTGGCAAGTCCACCACGCTGGCGGCCATGGTAGACCACATCAACGACCACCGTTACGAACACATATTGACCATTGAAGAT
CCCATTGAGTTCGTGCACGAGTCCAAAAAGTGCCTGGTTAACCAGCGCGAAGTGCACCGCGACACCTTGGGCTTCAATGA
AGCGCTGCGCTCGGCGCTGCGGGAAGACCCGGACATTATTCTGGTGGGCGAGTTGCGTGACCTTGAAACGATTCGTTTGG
CGCTGACCGCCGCTGAAACCGGCCATTTAGTATTCGGCACCCTGCACACCACGTCGGCGGCAAAAACCATTGACCGGGTG
GTTGACGTGTTTCCGGCCCAGGAAAAATCCATGGTACGGTCGATGCTGTCTGAATCTTTACAGGCGGTTATCTCGCAAAC
CCTGATGAAGAAGATGGGCGGCGGGCGTATTGCTGCTCACGAAATCATGATTGGCACCTCGGCTATTCGCAACTTGATCC
GTGAAGACAAAATCGCGCAGATGTATTCGTCGATACAGACCGGTGGCTCGCTGGGCATGCAGACCCTGGACCAGTGTCTG
GAACGCCTGTTGCAAAAGGGCCTTATTTCTCGCGATCAGGCGCGCTTGAAAGCAAAAATGCCCGATGCCTTTTAA
ATGGATATTACCGAACTGCTTGCCTTTTCGGCGAAACAGGGCGCTTCAGACTTGCACCTTTCTGCTGGCTTGCCGCCGAT
GATTCGTGTGGACGGTGATGTACGCCGTATTAACCTGCCTCCTTTGCCACATAAGGAAGTGCACGGTCTGATTTACGACA
TCATGAATGACAAGCAGCGTAAAGACTACGAAGAGTTTTTGGAAACCGATTTCTCGTTCGAAGTGGCCGGGGTTGCCCGT
TTCCGGGTTAACGCCTTTAACCAGAATCGCGGTTCCGGTGCGGTGTTCCGGACGATCCCCTCGAAAGTGCTGTCCATGGA
AGACCTAGGCATGGGACAGGTGTTCAAAGACATTTGCGCGGTGCCACGGGGGTTGGTTCTGGTAACCGGGCCCACCGGTT
CTGGCAAGTCCACCACGCTGGCGGCCATGGTAGACCACATCAACGACCACCGTTACGAACACATATTGACCATTGAAGAT
CCCATTGAGTTCGTGCACGAGTCCAAAAAGTGCCTGGTTAACCAGCGCGAAGTGCACCGCGACACCTTGGGCTTCAATGA
AGCGCTGCGCTCGGCGCTGCGGGAAGACCCGGACATTATTCTGGTGGGCGAGTTGCGTGACCTTGAAACGATTCGTTTGG
CGCTGACCGCCGCTGAAACCGGCCATTTAGTATTCGGCACCCTGCACACCACGTCGGCGGCAAAAACCATTGACCGGGTG
GTTGACGTGTTTCCGGCCCAGGAAAAATCCATGGTACGGTCGATGCTGTCTGAATCTTTACAGGCGGTTATCTCGCAAAC
CCTGATGAAGAAGATGGGCGGCGGGCGTATTGCTGCTCACGAAATCATGATTGGCACCTCGGCTATTCGCAACTTGATCC
GTGAAGACAAAATCGCGCAGATGTATTCGTCGATACAGACCGGTGGCTCGCTGGGCATGCAGACCCTGGACCAGTGTCTG
GAACGCCTGTTGCAAAAGGGCCTTATTTCTCGCGATCAGGCGCGCTTGAAAGCAAAAATGCCCGATGCCTTTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Pseudomonas stutzeri DSM 10701 |
88.372 |
100 |
0.884 |
| pilT | Pseudomonas aeruginosa PAK |
87.791 |
100 |
0.878 |
| pilT | Acinetobacter nosocomialis M2 |
82.267 |
100 |
0.823 |
| pilT | Acinetobacter baumannii D1279779 |
82.267 |
100 |
0.823 |
| pilT | Acinetobacter baumannii strain A118 |
82.267 |
100 |
0.823 |
| pilT | Acinetobacter baylyi ADP1 |
80.814 |
100 |
0.808 |
| pilT | Legionella pneumophila strain Lp02 |
77.246 |
97.093 |
0.75 |
| pilT | Legionella pneumophila strain ERS1305867 |
77.246 |
97.093 |
0.75 |
| pilT | Neisseria meningitidis 8013 |
67.059 |
98.837 |
0.663 |
| pilT | Neisseria gonorrhoeae MS11 |
66.765 |
98.837 |
0.66 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
66.176 |
98.837 |
0.654 |
| pilT | Vibrio cholerae strain A1552 |
66.176 |
98.837 |
0.654 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
51.304 |
100 |
0.515 |
| pilU | Acinetobacter baylyi ADP1 |
40.407 |
100 |
0.404 |
| pilU | Pseudomonas stutzeri DSM 10701 |
39.823 |
98.547 |
0.392 |
| pilU | Vibrio cholerae strain A1552 |
39.701 |
97.384 |
0.387 |