Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | EBS_RS01605 | Genome accession | NZ_AP012978 |
| Coordinates | 333776..334813 (+) | Length | 345 a.a. |
| NCBI ID | WP_043107007.1 | Uniprot ID | S6BVU2 |
| Organism | Endosymbiont of unidentified scaly snail isolate Monju | ||
| Function | type IV pilus retraction (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 328776..339813
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EBS_RS01580 (EBS_0302) | - | 328873..330858 (-) | 1986 | WP_043106999.1 | dynamin family protein | - |
| EBS_RS01585 (EBS_0303) | - | 330939..331253 (-) | 315 | WP_043107000.1 | DUF167 family protein | - |
| EBS_RS01590 (EBS_0304) | - | 331253..331828 (-) | 576 | WP_043107003.1 | YggT family protein | - |
| EBS_RS01595 (EBS_0305) | proC | 331832..332659 (-) | 828 | WP_043107005.1 | pyrroline-5-carboxylate reductase | - |
| EBS_RS01600 (EBS_0306) | - | 332957..333643 (-) | 687 | WP_043107006.1 | YggS family pyridoxal phosphate-dependent enzyme | - |
| EBS_RS01605 (EBS_0307) | pilT | 333776..334813 (+) | 1038 | WP_043107007.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| EBS_RS01610 (EBS_0308) | pilU | 334905..336020 (+) | 1116 | WP_043109041.1 | PilT/PilU family type 4a pilus ATPase | Machinery gene |
| EBS_RS01615 (EBS_0309) | - | 336037..336900 (-) | 864 | WP_043107008.1 | dihydroorotate dehydrogenase electron transfer subunit | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 38159.89 Da Isoelectric Point: 6.7781
>NTDB_id=65401 EBS_RS01605 WP_043107007.1 333776..334813(+) (pilT) [Endosymbiont of unidentified scaly snail isolate Monju]
MDIAELLAFSVKHNASDLHLSAGLPPMIRVDGDIRRINVPVLDHKTVHALVYDIMNDKQRKDYEEFFEVDFSFEIPGLAR
FRVNAFNQDRGAAAVFRTIPSKVLTLDELEAPPVFKSICDNPRGLVLVTGPTGSGKSTTLAAMMDYKNETEYGHILTIED
PIEFVHHSKKCLINQREVHRDTLGFAEALRSALREDPDIILVGELRDLETIRLALTAAETGHLVFGALHTSSAAKTIDRI
VDVFPAGEKAMVRSMLSESLRAVISQTLLKKVGGGRIAAHEIMVGTPAIRNLIREDKVAQMYSAIQTGQAHGMQTLDQCL
QDLVKKGLVSRQDARARAVNRDLFG
MDIAELLAFSVKHNASDLHLSAGLPPMIRVDGDIRRINVPVLDHKTVHALVYDIMNDKQRKDYEEFFEVDFSFEIPGLAR
FRVNAFNQDRGAAAVFRTIPSKVLTLDELEAPPVFKSICDNPRGLVLVTGPTGSGKSTTLAAMMDYKNETEYGHILTIED
PIEFVHHSKKCLINQREVHRDTLGFAEALRSALREDPDIILVGELRDLETIRLALTAAETGHLVFGALHTSSAAKTIDRI
VDVFPAGEKAMVRSMLSESLRAVISQTLLKKVGGGRIAAHEIMVGTPAIRNLIREDKVAQMYSAIQTGQAHGMQTLDQCL
QDLVKKGLVSRQDARARAVNRDLFG
Nucleotide
Download Length: 1038 bp
>NTDB_id=65401 EBS_RS01605 WP_043107007.1 333776..334813(+) (pilT) [Endosymbiont of unidentified scaly snail isolate Monju]
ATGGACATTGCAGAACTGCTCGCCTTCAGCGTCAAGCACAATGCCTCGGATCTGCATCTCTCGGCCGGTCTGCCGCCGAT
GATCCGGGTGGACGGGGACATCCGGCGGATCAACGTGCCGGTGCTCGATCACAAGACCGTGCATGCGCTGGTCTACGACA
TCATGAACGACAAGCAGCGCAAGGACTACGAGGAATTCTTCGAAGTTGATTTCTCGTTCGAGATCCCGGGATTGGCGCGT
TTCCGGGTCAATGCCTTCAATCAGGATCGCGGAGCCGCGGCGGTATTCCGGACCATCCCCTCCAAGGTGCTTACCCTCGA
CGAGCTGGAGGCGCCGCCGGTGTTCAAGAGCATCTGCGACAACCCGCGTGGCCTGGTGCTGGTCACCGGGCCGACCGGCT
CGGGCAAGTCCACCACCCTGGCGGCGATGATGGACTACAAGAACGAGACCGAGTACGGGCATATCCTCACCATCGAGGAC
CCCATCGAATTCGTGCACCATTCCAAGAAGTGCCTGATCAACCAGCGCGAGGTGCACCGTGACACCCTGGGTTTCGCCGA
GGCACTGCGTTCGGCCCTGCGCGAGGACCCGGACATCATCCTGGTCGGCGAACTGCGCGACCTGGAGACCATCCGCCTGG
CGCTGACGGCCGCCGAGACCGGTCACCTGGTGTTCGGCGCCCTGCATACCAGTTCGGCCGCCAAGACCATCGACCGGATC
GTGGACGTGTTCCCGGCCGGCGAGAAGGCCATGGTGCGCTCCATGCTGTCGGAGTCGCTGCGCGCGGTGATCTCGCAGAC
CCTGCTCAAGAAGGTCGGGGGTGGGCGCATCGCCGCGCACGAGATCATGGTCGGTACCCCGGCCATCCGCAACCTGATCC
GCGAAGACAAGGTGGCGCAGATGTACTCGGCCATCCAGACCGGGCAGGCGCACGGCATGCAGACGCTTGACCAGTGCCTG
CAGGACCTGGTGAAGAAGGGCCTTGTATCGCGTCAGGATGCCCGGGCCCGAGCAGTCAACCGCGACCTTTTCGGGTGA
ATGGACATTGCAGAACTGCTCGCCTTCAGCGTCAAGCACAATGCCTCGGATCTGCATCTCTCGGCCGGTCTGCCGCCGAT
GATCCGGGTGGACGGGGACATCCGGCGGATCAACGTGCCGGTGCTCGATCACAAGACCGTGCATGCGCTGGTCTACGACA
TCATGAACGACAAGCAGCGCAAGGACTACGAGGAATTCTTCGAAGTTGATTTCTCGTTCGAGATCCCGGGATTGGCGCGT
TTCCGGGTCAATGCCTTCAATCAGGATCGCGGAGCCGCGGCGGTATTCCGGACCATCCCCTCCAAGGTGCTTACCCTCGA
CGAGCTGGAGGCGCCGCCGGTGTTCAAGAGCATCTGCGACAACCCGCGTGGCCTGGTGCTGGTCACCGGGCCGACCGGCT
CGGGCAAGTCCACCACCCTGGCGGCGATGATGGACTACAAGAACGAGACCGAGTACGGGCATATCCTCACCATCGAGGAC
CCCATCGAATTCGTGCACCATTCCAAGAAGTGCCTGATCAACCAGCGCGAGGTGCACCGTGACACCCTGGGTTTCGCCGA
GGCACTGCGTTCGGCCCTGCGCGAGGACCCGGACATCATCCTGGTCGGCGAACTGCGCGACCTGGAGACCATCCGCCTGG
CGCTGACGGCCGCCGAGACCGGTCACCTGGTGTTCGGCGCCCTGCATACCAGTTCGGCCGCCAAGACCATCGACCGGATC
GTGGACGTGTTCCCGGCCGGCGAGAAGGCCATGGTGCGCTCCATGCTGTCGGAGTCGCTGCGCGCGGTGATCTCGCAGAC
CCTGCTCAAGAAGGTCGGGGGTGGGCGCATCGCCGCGCACGAGATCATGGTCGGTACCCCGGCCATCCGCAACCTGATCC
GCGAAGACAAGGTGGCGCAGATGTACTCGGCCATCCAGACCGGGCAGGCGCACGGCATGCAGACGCTTGACCAGTGCCTG
CAGGACCTGGTGAAGAAGGGCCTTGTATCGCGTCAGGATGCCCGGGCCCGAGCAGTCAACCGCGACCTTTTCGGGTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Pseudomonas aeruginosa PAK |
82.84 |
97.971 |
0.812 |
| pilT | Pseudomonas stutzeri DSM 10701 |
80.814 |
99.71 |
0.806 |
| pilT | Acinetobacter nosocomialis M2 |
78.779 |
99.71 |
0.786 |
| pilT | Acinetobacter baumannii D1279779 |
78.779 |
99.71 |
0.786 |
| pilT | Acinetobacter baumannii strain A118 |
78.779 |
99.71 |
0.786 |
| pilT | Acinetobacter baylyi ADP1 |
77.616 |
99.71 |
0.774 |
| pilT | Legionella pneumophila strain Lp02 |
74.419 |
99.71 |
0.742 |
| pilT | Legionella pneumophila strain ERS1305867 |
74.419 |
99.71 |
0.742 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
71.217 |
97.681 |
0.696 |
| pilT | Vibrio cholerae strain A1552 |
71.217 |
97.681 |
0.696 |
| pilT | Neisseria meningitidis 8013 |
69.096 |
99.42 |
0.687 |
| pilT | Neisseria gonorrhoeae MS11 |
68.805 |
99.42 |
0.684 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
49.855 |
100 |
0.499 |
| pilU | Vibrio cholerae strain A1552 |
41.194 |
97.101 |
0.4 |
| pilU | Acinetobacter baylyi ADP1 |
40 |
98.551 |
0.394 |
| pilU | Pseudomonas stutzeri DSM 10701 |
40.299 |
97.101 |
0.391 |