Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   OFY20_RS06795 Genome accession   NZ_CP107524
Coordinates   1297978..1298460 (-) Length   160 a.a.
NCBI ID   WP_000163512.1    Uniprot ID   Q8DZB3
Organism   Streptococcus agalactiae strain SA5087     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1292978..1303460
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OFY20_RS06775 (OFY20_06775) alsS 1293237..1294919 (-) 1683 WP_000140344.1 acetolactate synthase AlsS -
  OFY20_RS06780 (OFY20_06780) - 1295029..1296255 (-) 1227 WP_000934874.1 hypothetical protein -
  OFY20_RS06785 (OFY20_06785) - 1296245..1297435 (-) 1191 WP_001081533.1 AI-2E family transporter -
  OFY20_RS06790 (OFY20_06790) - 1297527..1297988 (-) 462 WP_000796049.1 NUDIX hydrolase -
  OFY20_RS06795 (OFY20_06795) mutX 1297978..1298460 (-) 483 WP_000163512.1 8-oxo-dGTP diphosphatase Machinery gene
  OFY20_RS06800 (OFY20_06800) hylB 1298678..1301896 (+) 3219 WP_000403417.1 hyaluronate lyase -
  OFY20_RS06805 (OFY20_06805) rfbB 1301948..1302994 (-) 1047 WP_000134279.1 dTDP-glucose 4,6-dehydratase -

Sequence

Protein


Download         Length: 160 a.a.        Molecular weight: 18837.23 Da        Isoelectric Point: 4.5116

>NTDB_id=643542 OFY20_RS06795 WP_000163512.1 1297978..1298460(-) (mutX) [Streptococcus agalactiae strain SA5087]
MTKLATICYIDNGKELLLLHRNKKENDVHEGKWISVGGKLEAGETPDECAKREILEETHLTVKKMDFKGVITFPEFTPGH
DWYTYVFKVTDYEGELISDDESREGTLEWVPYDQVLSKPTWQGDYEIFKWILEDVPFFSAKFVYDEHQNLIEKTVNFYEK

Nucleotide


Download         Length: 483 bp        

>NTDB_id=643542 OFY20_RS06795 WP_000163512.1 1297978..1298460(-) (mutX) [Streptococcus agalactiae strain SA5087]
ATGACTAAATTAGCAACAATTTGTTACATTGACAATGGCAAGGAATTACTTCTATTGCACCGCAACAAAAAAGAGAATGA
TGTTCATGAGGGAAAGTGGATCTCGGTAGGTGGTAAACTGGAGGCAGGTGAAACTCCTGATGAATGTGCTAAGCGTGAAA
TTCTAGAAGAAACCCATTTAACGGTAAAAAAAATGGATTTTAAAGGAGTCATCACTTTTCCTGAATTTACGCCAGGTCAT
GATTGGTATACCTATGTCTTTAAAGTAACAGATTATGAAGGAGAGTTAATTTCAGATGATGAATCACGAGAAGGAACTTT
AGAATGGGTACCATATGATCAAGTTCTTTCTAAGCCAACGTGGCAAGGAGATTACGAAATTTTTAAATGGATTTTAGAAG
ATGTTCCTTTCTTTTCTGCTAAGTTTGTTTATGATGAACACCAAAATTTAATTGAAAAGACGGTTAATTTTTATGAAAAA
TAG

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(3-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q8DZB3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

71.698

99.375

0.712