Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | LQF09_RS03375 | Genome accession | NZ_CP088935 |
| Coordinates | 752433..753473 (-) | Length | 346 a.a. |
| NCBI ID | WP_002930383.1 | Uniprot ID | N6YE90 |
| Organism | Thauera sp. WB-2 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 747433..758473
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LQF09_RS03360 (LQF09_03360) | - | 748137..749789 (-) | 1653 | WP_270069211.1 | FecR domain-containing protein | - |
| LQF09_RS03365 (LQF09_03365) | - | 749978..751144 (+) | 1167 | WP_270069212.1 | class I SAM-dependent RNA methyltransferase | - |
| LQF09_RS03370 (LQF09_03370) | pilU | 751177..752310 (-) | 1134 | WP_002930380.1 | PilT/PilU family type 4a pilus ATPase | Machinery gene |
| LQF09_RS03375 (LQF09_03375) | pilT | 752433..753473 (-) | 1041 | WP_002930383.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| LQF09_RS03380 (LQF09_03380) | - | 753566..754273 (+) | 708 | WP_270069213.1 | YggS family pyridoxal phosphate-dependent enzyme | - |
| LQF09_RS03385 (LQF09_03385) | proC | 754332..755156 (+) | 825 | WP_270069214.1 | pyrroline-5-carboxylate reductase | - |
| LQF09_RS03390 (LQF09_03390) | - | 755159..755740 (+) | 582 | WP_002940003.1 | YggT family protein | - |
| LQF09_RS03395 (LQF09_03395) | - | 755793..757073 (-) | 1281 | WP_270069215.1 | dihydroorotase | - |
| LQF09_RS03400 (LQF09_03400) | - | 757101..758060 (-) | 960 | WP_002939992.1 | aspartate carbamoyltransferase catalytic subunit | - |
Sequence
Protein
Download Length: 346 a.a. Molecular weight: 38589.25 Da Isoelectric Point: 7.2377
>NTDB_id=634069 LQF09_RS03375 WP_002930383.1 752433..753473(-) (pilT) [Thauera sp. WB-2]
MDITELLAFAVKNKASDLHLSAGLPPMIRVHGDVRRINLPPLEHKEVHAMVYDIMNDAQRKQYEESWECDFSFAIPNLAR
FRVNAFNQNRGAGAVFRTIPSKVLTLEELNCPKIFKDISSQPRGIVLVTGPTGSGKSTTLAAMIDYVNENQYGHILTVED
PIEFVHESKRCLINQREVHRDTMSFNNALRAALREDPDVILVGEMRDLETIRLALTAAETGHLVFGTLHTSSAAKTIDRI
VDVFPAAEKDMVRSMLSESLRAVISQTLLKTKDGQGRVAAHEIMIGSPAIRNLIRENKIAQMYSSIQTGQNVGMQTLDQC
LADLVRRNVVSSAEARIRAQNKDNFV
MDITELLAFAVKNKASDLHLSAGLPPMIRVHGDVRRINLPPLEHKEVHAMVYDIMNDAQRKQYEESWECDFSFAIPNLAR
FRVNAFNQNRGAGAVFRTIPSKVLTLEELNCPKIFKDISSQPRGIVLVTGPTGSGKSTTLAAMIDYVNENQYGHILTVED
PIEFVHESKRCLINQREVHRDTMSFNNALRAALREDPDVILVGEMRDLETIRLALTAAETGHLVFGTLHTSSAAKTIDRI
VDVFPAAEKDMVRSMLSESLRAVISQTLLKTKDGQGRVAAHEIMIGSPAIRNLIRENKIAQMYSSIQTGQNVGMQTLDQC
LADLVRRNVVSSAEARIRAQNKDNFV
Nucleotide
Download Length: 1041 bp
>NTDB_id=634069 LQF09_RS03375 WP_002930383.1 752433..753473(-) (pilT) [Thauera sp. WB-2]
ATGGACATCACTGAACTCCTCGCCTTCGCAGTCAAGAACAAGGCCTCCGATCTTCACCTGTCGGCCGGCTTGCCGCCCAT
GATCCGCGTCCATGGCGACGTGCGCCGCATCAACCTGCCTCCGCTCGAGCACAAGGAAGTGCACGCCATGGTGTATGACA
TCATGAACGACGCGCAGCGCAAGCAGTACGAGGAGTCCTGGGAATGCGACTTCTCCTTCGCCATACCCAACCTGGCGCGC
TTCCGGGTCAATGCCTTCAACCAGAACCGCGGTGCAGGCGCGGTGTTCCGTACCATTCCGTCGAAGGTGCTGACGCTCGA
AGAGCTCAACTGTCCGAAGATCTTCAAGGACATCTCCAGCCAGCCGCGCGGCATCGTGCTGGTGACCGGGCCGACGGGCT
CCGGCAAGTCGACGACGCTGGCGGCGATGATCGACTACGTCAACGAGAACCAGTATGGCCACATCCTGACCGTCGAAGAC
CCTATCGAGTTCGTGCATGAATCCAAGCGCTGCCTGATCAATCAGCGCGAGGTGCACCGCGACACGATGTCCTTCAACAA
TGCCCTGCGCGCGGCGCTGCGCGAGGACCCGGACGTCATCCTCGTGGGCGAAATGCGCGACCTCGAAACCATCCGCCTGG
CACTGACCGCAGCCGAAACCGGCCACCTCGTGTTCGGCACCCTGCACACCTCGTCCGCGGCCAAGACCATCGACCGTATC
GTCGACGTGTTCCCGGCGGCGGAAAAGGACATGGTGCGCTCGATGCTGTCGGAGTCACTGCGCGCGGTGATCTCGCAGAC
CCTGCTCAAGACCAAGGACGGCCAGGGCCGGGTGGCGGCGCACGAGATCATGATCGGCAGCCCGGCTATCCGCAACCTGA
TCCGCGAGAACAAGATCGCACAGATGTACTCGTCGATCCAGACCGGTCAGAACGTCGGCATGCAGACCCTCGACCAGTGC
CTGGCCGACCTGGTGCGCCGCAATGTCGTCTCGTCGGCCGAAGCCCGTATCCGGGCACAGAACAAGGACAACTTCGTCTA
G
ATGGACATCACTGAACTCCTCGCCTTCGCAGTCAAGAACAAGGCCTCCGATCTTCACCTGTCGGCCGGCTTGCCGCCCAT
GATCCGCGTCCATGGCGACGTGCGCCGCATCAACCTGCCTCCGCTCGAGCACAAGGAAGTGCACGCCATGGTGTATGACA
TCATGAACGACGCGCAGCGCAAGCAGTACGAGGAGTCCTGGGAATGCGACTTCTCCTTCGCCATACCCAACCTGGCGCGC
TTCCGGGTCAATGCCTTCAACCAGAACCGCGGTGCAGGCGCGGTGTTCCGTACCATTCCGTCGAAGGTGCTGACGCTCGA
AGAGCTCAACTGTCCGAAGATCTTCAAGGACATCTCCAGCCAGCCGCGCGGCATCGTGCTGGTGACCGGGCCGACGGGCT
CCGGCAAGTCGACGACGCTGGCGGCGATGATCGACTACGTCAACGAGAACCAGTATGGCCACATCCTGACCGTCGAAGAC
CCTATCGAGTTCGTGCATGAATCCAAGCGCTGCCTGATCAATCAGCGCGAGGTGCACCGCGACACGATGTCCTTCAACAA
TGCCCTGCGCGCGGCGCTGCGCGAGGACCCGGACGTCATCCTCGTGGGCGAAATGCGCGACCTCGAAACCATCCGCCTGG
CACTGACCGCAGCCGAAACCGGCCACCTCGTGTTCGGCACCCTGCACACCTCGTCCGCGGCCAAGACCATCGACCGTATC
GTCGACGTGTTCCCGGCGGCGGAAAAGGACATGGTGCGCTCGATGCTGTCGGAGTCACTGCGCGCGGTGATCTCGCAGAC
CCTGCTCAAGACCAAGGACGGCCAGGGCCGGGTGGCGGCGCACGAGATCATGATCGGCAGCCCGGCTATCCGCAACCTGA
TCCGCGAGAACAAGATCGCACAGATGTACTCGTCGATCCAGACCGGTCAGAACGTCGGCATGCAGACCCTCGACCAGTGC
CTGGCCGACCTGGTGCGCCGCAATGTCGTCTCGTCGGCCGAAGCCCGTATCCGGGCACAGAACAAGGACAACTTCGTCTA
G
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Acinetobacter baumannii D1279779 |
79.769 |
100 |
0.798 |
| pilT | Acinetobacter baumannii strain A118 |
79.769 |
100 |
0.798 |
| pilT | Acinetobacter nosocomialis M2 |
79.769 |
100 |
0.798 |
| pilT | Pseudomonas aeruginosa PAK |
77.391 |
99.711 |
0.772 |
| pilT | Acinetobacter baylyi ADP1 |
77.101 |
99.711 |
0.769 |
| pilT | Pseudomonas stutzeri DSM 10701 |
75.942 |
99.711 |
0.757 |
| pilT | Legionella pneumophila strain Lp02 |
73.913 |
99.711 |
0.737 |
| pilT | Legionella pneumophila strain ERS1305867 |
73.913 |
99.711 |
0.737 |
| pilT | Neisseria meningitidis 8013 |
71.594 |
99.711 |
0.714 |
| pilT | Neisseria gonorrhoeae MS11 |
71.304 |
99.711 |
0.711 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
68.75 |
97.11 |
0.668 |
| pilT | Vibrio cholerae strain A1552 |
68.75 |
97.11 |
0.668 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
53.333 |
99.711 |
0.532 |
| pilU | Acinetobacter baylyi ADP1 |
41.954 |
100 |
0.422 |
| pilU | Vibrio cholerae strain A1552 |
42.388 |
96.821 |
0.41 |
| pilU | Pseudomonas stutzeri DSM 10701 |
40.29 |
99.711 |
0.402 |