Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | N5922_RS04660 | Genome accession | NZ_CP104681 |
| Coordinates | 938748..939722 (+) | Length | 324 a.a. |
| NCBI ID | WP_089584700.1 | Uniprot ID | - |
| Organism | Escherichia coli strain 2022CK-00450 | ||
| Function | type IV pilus retraction (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 933748..944722
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N5922_RS25840 | - | 934017..934355 (+) | 339 | WP_315858822.1 | hypothetical protein | - |
| N5922_RS04650 (N5922_04645) | - | 934422..937466 (-) | 3045 | WP_032203427.1 | metallophosphoesterase | - |
| N5922_RS04655 (N5922_04650) | - | 938081..938656 (+) | 576 | WP_032203429.1 | recombinase family protein | - |
| N5922_RS04660 (N5922_04655) | pilT | 938748..939722 (+) | 975 | WP_089584700.1 | PilT/PilU family type 4a pilus ATPase | Machinery gene |
| N5922_RS04665 (N5922_04660) | ruvX | 939906..940322 (-) | 417 | WP_000017106.1 | Holliday junction resolvase RuvX | - |
| N5922_RS04670 (N5922_04665) | yqgE | 940322..940885 (-) | 564 | WP_001053178.1 | YqgE/AlgH family protein | - |
| N5922_RS04675 (N5922_04670) | gshB | 940994..941944 (-) | 951 | WP_000593273.1 | glutathione synthase | - |
| N5922_RS04680 (N5922_04675) | rsmE | 941957..942688 (-) | 732 | WP_001300912.1 | 16S rRNA (uracil(1498)-N(3))-methyltransferase | - |
| N5922_RS04685 (N5922_04680) | endA | 942768..943475 (-) | 708 | WP_000286500.1 | deoxyribonuclease I | - |
| N5922_RS04690 (N5922_04685) | yggI | 943570..944067 (-) | 498 | WP_001300769.1 | SprT family zinc-dependent metalloprotease | - |
Sequence
Protein
Download Length: 324 a.a. Molecular weight: 35842.89 Da Isoelectric Point: 6.2264
>NTDB_id=632355 N5922_RS04660 WP_089584700.1 938748..939722(+) (pilT) [Escherichia coli strain 2022CK-00450]
MSFVFSVYNFHNASDLHLCSAWPARWRIRGRMEAAPFDTPDVEELLREWLDDDQRAILLENGQLDFAVSLAENQRLRGSA
FAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYL
YASQRCLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDSFP
AQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVGMITFQQSYQHRVG
EGRL
MSFVFSVYNFHNASDLHLCSAWPARWRIRGRMEAAPFDTPDVEELLREWLDDDQRAILLENGQLDFAVSLAENQRLRGSA
FAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYL
YASQRCLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDSFP
AQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVGMITFQQSYQHRVG
EGRL
Nucleotide
Download Length: 975 bp
>NTDB_id=632355 N5922_RS04660 WP_089584700.1 938748..939722(+) (pilT) [Escherichia coli strain 2022CK-00450]
TTGTCTTTTGTTTTTAGTGTGTATAACTTCCATAATGCCTCGGATCTACACCTGTGCAGCGCCTGGCCCGCACGATGGCG
CATTCGCGGCAGAATGGAAGCTGCGCCGTTTGATACGCCGGACGTCGAAGAGCTACTGCGGGAGTGGCTGGATGACGATC
AGCGGGCAATATTGCTGGAGAATGGTCAGCTGGATTTTGCCGTGTCGCTGGCGGAAAACCAGCGATTGCGTGGCAGCGCA
TTCGCGCAACGGCATGGCATTTCGCTGGCGTTACGGCTGTTACCTTCGCACTGCCCGCAGCTCGAACAGCTTGGCGCACC
AACGGTATTGCCGGAATTACTCAAGAGCGAGAATGGCCTGATTCTGGTGACGGGGGCGACGGGGAGTGGCAAATCTACCA
CGCTGGCGGCGATGGTTGGCTATCTCAATCAACATGCCGATGCGCATATTCTGACGCTGGAAGATCCTGTTGAATATCTC
TATGCCAGCCAGCGATGTTTGATCCAGCAGCGGGAAATTGGTTTGCACTGTATGACGTTCGCATCGGGATTGCGGGCCGC
ATTGCGGGAAGATCCTGATGTGATTTTGCTCGGAGAGCTGCGTGACAGCGAGACAATCCGTCTGGCACTGACGGCGGCAG
AAACCGGGCATTTGGTGCTGGCAACATTACATACGCGTGGTGCCGCGCAGGCAGTTGAGCGACTGGTGGATTCATTTCCG
GCGCAGGAAAAAGACCCCGTGCGTAATCAACTGGCAGGTAGTTTACGGGCAGTGCTGTCACAAAAGCTGGAAGTGGATAA
ACAGGAAGGACGCGTGGCGCTATTTGAATTGCTGATTAACACACCCGCGGTGGGGAATTTGATTCGCGAAGGGAAAACCC
ACCAGTTACCGCATGTTATTCAAACCGGGCAGCAGGTGGGGATGATAACGTTTCAGCAGAGTTATCAGCACCGGGTGGGG
GAAGGGCGTTTGTGA
TTGTCTTTTGTTTTTAGTGTGTATAACTTCCATAATGCCTCGGATCTACACCTGTGCAGCGCCTGGCCCGCACGATGGCG
CATTCGCGGCAGAATGGAAGCTGCGCCGTTTGATACGCCGGACGTCGAAGAGCTACTGCGGGAGTGGCTGGATGACGATC
AGCGGGCAATATTGCTGGAGAATGGTCAGCTGGATTTTGCCGTGTCGCTGGCGGAAAACCAGCGATTGCGTGGCAGCGCA
TTCGCGCAACGGCATGGCATTTCGCTGGCGTTACGGCTGTTACCTTCGCACTGCCCGCAGCTCGAACAGCTTGGCGCACC
AACGGTATTGCCGGAATTACTCAAGAGCGAGAATGGCCTGATTCTGGTGACGGGGGCGACGGGGAGTGGCAAATCTACCA
CGCTGGCGGCGATGGTTGGCTATCTCAATCAACATGCCGATGCGCATATTCTGACGCTGGAAGATCCTGTTGAATATCTC
TATGCCAGCCAGCGATGTTTGATCCAGCAGCGGGAAATTGGTTTGCACTGTATGACGTTCGCATCGGGATTGCGGGCCGC
ATTGCGGGAAGATCCTGATGTGATTTTGCTCGGAGAGCTGCGTGACAGCGAGACAATCCGTCTGGCACTGACGGCGGCAG
AAACCGGGCATTTGGTGCTGGCAACATTACATACGCGTGGTGCCGCGCAGGCAGTTGAGCGACTGGTGGATTCATTTCCG
GCGCAGGAAAAAGACCCCGTGCGTAATCAACTGGCAGGTAGTTTACGGGCAGTGCTGTCACAAAAGCTGGAAGTGGATAA
ACAGGAAGGACGCGTGGCGCTATTTGAATTGCTGATTAACACACCCGCGGTGGGGAATTTGATTCGCGAAGGGAAAACCC
ACCAGTTACCGCATGTTATTCAAACCGGGCAGCAGGTGGGGATGATAACGTTTCAGCAGAGTTATCAGCACCGGGTGGGG
GAAGGGCGTTTGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.