Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | LM502_RS17055 | Genome accession | NZ_CP087224 |
| Coordinates | 3661871..3662905 (-) | Length | 344 a.a. |
| NCBI ID | WP_013333867.1 | Uniprot ID | E1VAP8 |
| Organism | Halomonas elongata strain DL7 | ||
| Function | type IV pilus retraction (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3656871..3667905
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LM502_RS17045 (LM502_17020) | tyrS | 3659421..3660620 (-) | 1200 | WP_013333865.1 | tyrosine--tRNA ligase | - |
| LM502_RS17050 (LM502_17025) | - | 3660732..3661862 (+) | 1131 | WP_013333866.1 | anhydro-N-acetylmuramic acid kinase | - |
| LM502_RS17055 (LM502_17030) | pilT | 3661871..3662905 (-) | 1035 | WP_013333867.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| LM502_RS17060 (LM502_17035) | - | 3662962..3663666 (+) | 705 | WP_013333868.1 | YggS family pyridoxal phosphate-dependent enzyme | - |
| LM502_RS17065 (LM502_17040) | proC | 3663727..3664551 (+) | 825 | WP_013333869.1 | pyrroline-5-carboxylate reductase | - |
| LM502_RS17070 (LM502_17045) | - | 3664578..3665171 (+) | 594 | WP_013333870.1 | YggT family protein | - |
| LM502_RS17075 (LM502_17050) | metX | 3665214..3666371 (+) | 1158 | WP_013333871.1 | homoserine O-succinyltransferase MetX | - |
| LM502_RS17080 (LM502_17055) | metW | 3666371..3666997 (+) | 627 | WP_041602709.1 | methionine biosynthesis protein MetW | - |
| LM502_RS17085 (LM502_17060) | sfsA | 3667004..3667735 (-) | 732 | WP_013333873.1 | DNA/RNA nuclease SfsA | - |
Sequence
Protein
Download Length: 344 a.a. Molecular weight: 36829.38 Da Isoelectric Point: 6.6657
>NTDB_id=628153 LM502_RS17055 WP_013333867.1 3661871..3662905(-) (pilT) [Halomonas elongata strain DL7]
MNITELLAASAKRGASDLHLSAGMAPMMRVDGELEALDGPPVDDPTLRRELRRLLGESHWATFESELEVDVALELPGVAR
FRGNVFQHGRGIGAVFRTIPGDVPGLAALGMADTLGALAELRRGLVLVTGPTGSGKSTTLAALVNAINETRREHILTIED
PVEFVHHGKRCLVSQREVSRDTRSFAAALRSALREDPDVIMVGEMRDLETMRLALTAAETGHLVLGTLHTLSAAKTIDRI
IDAFPGPEQGMVRAMLSESLQAVVSQVLLKRCGGGRVAAHEVMVATPAVRNLIREDKVAQLHSVLQTGAAQGMQTLDTAL
ARLVAEGVVAPDEAQSRARAPLRR
MNITELLAASAKRGASDLHLSAGMAPMMRVDGELEALDGPPVDDPTLRRELRRLLGESHWATFESELEVDVALELPGVAR
FRGNVFQHGRGIGAVFRTIPGDVPGLAALGMADTLGALAELRRGLVLVTGPTGSGKSTTLAALVNAINETRREHILTIED
PVEFVHHGKRCLVSQREVSRDTRSFAAALRSALREDPDVIMVGEMRDLETMRLALTAAETGHLVLGTLHTLSAAKTIDRI
IDAFPGPEQGMVRAMLSESLQAVVSQVLLKRCGGGRVAAHEVMVATPAVRNLIREDKVAQLHSVLQTGAAQGMQTLDTAL
ARLVAEGVVAPDEAQSRARAPLRR
Nucleotide
Download Length: 1035 bp
>NTDB_id=628153 LM502_RS17055 WP_013333867.1 3661871..3662905(-) (pilT) [Halomonas elongata strain DL7]
ATGAATATTACCGAACTGCTGGCAGCCTCGGCAAAGCGGGGCGCCTCCGATCTGCATCTGTCGGCAGGCATGGCACCGAT
GATGCGCGTCGACGGCGAGCTGGAAGCGCTCGATGGGCCGCCCGTCGATGACCCGACCTTGCGCAGAGAACTTCGAAGAC
TGCTCGGTGAGTCGCATTGGGCAACCTTCGAGTCCGAGTTGGAAGTCGACGTTGCCCTGGAGCTTCCCGGCGTGGCGCGT
TTCCGGGGCAACGTCTTCCAGCATGGCCGGGGCATCGGCGCGGTGTTTCGCACCATCCCCGGCGATGTGCCTGGACTGGC
TGCGCTCGGCATGGCGGATACCCTGGGGGCTCTGGCCGAACTGCGACGCGGACTGGTGCTGGTGACGGGGCCCACTGGTT
CGGGCAAGAGCACGACCCTGGCGGCGCTGGTCAATGCCATCAACGAGACGCGCCGCGAGCACATCCTGACCATCGAGGAT
CCGGTGGAGTTCGTGCATCACGGCAAGCGGTGCCTGGTCAGCCAGCGCGAGGTGTCGCGGGATACCCGGAGCTTTGCGGC
GGCCTTGCGCAGCGCGCTGCGCGAGGATCCCGATGTCATCATGGTCGGTGAAATGCGCGACCTGGAGACCATGCGGCTGG
CGCTGACTGCCGCCGAGACGGGGCACCTGGTACTGGGAACCCTGCATACGCTCTCGGCGGCCAAGACCATCGATCGCATC
ATCGATGCCTTCCCCGGCCCCGAACAGGGCATGGTGCGGGCGATGCTGTCGGAATCCCTGCAGGCGGTCGTCTCGCAGGT
GCTGTTGAAGCGCTGTGGGGGCGGGCGCGTGGCGGCTCATGAAGTCATGGTCGCCACGCCGGCGGTGCGTAACCTGATTC
GCGAGGACAAGGTGGCGCAACTCCATTCGGTGCTGCAGACCGGCGCCGCCCAGGGCATGCAGACACTGGACACGGCGCTG
GCGCGGCTGGTGGCCGAGGGTGTGGTGGCGCCTGACGAGGCGCAGTCGCGGGCGCGCGCTCCCCTGAGGCGGTGA
ATGAATATTACCGAACTGCTGGCAGCCTCGGCAAAGCGGGGCGCCTCCGATCTGCATCTGTCGGCAGGCATGGCACCGAT
GATGCGCGTCGACGGCGAGCTGGAAGCGCTCGATGGGCCGCCCGTCGATGACCCGACCTTGCGCAGAGAACTTCGAAGAC
TGCTCGGTGAGTCGCATTGGGCAACCTTCGAGTCCGAGTTGGAAGTCGACGTTGCCCTGGAGCTTCCCGGCGTGGCGCGT
TTCCGGGGCAACGTCTTCCAGCATGGCCGGGGCATCGGCGCGGTGTTTCGCACCATCCCCGGCGATGTGCCTGGACTGGC
TGCGCTCGGCATGGCGGATACCCTGGGGGCTCTGGCCGAACTGCGACGCGGACTGGTGCTGGTGACGGGGCCCACTGGTT
CGGGCAAGAGCACGACCCTGGCGGCGCTGGTCAATGCCATCAACGAGACGCGCCGCGAGCACATCCTGACCATCGAGGAT
CCGGTGGAGTTCGTGCATCACGGCAAGCGGTGCCTGGTCAGCCAGCGCGAGGTGTCGCGGGATACCCGGAGCTTTGCGGC
GGCCTTGCGCAGCGCGCTGCGCGAGGATCCCGATGTCATCATGGTCGGTGAAATGCGCGACCTGGAGACCATGCGGCTGG
CGCTGACTGCCGCCGAGACGGGGCACCTGGTACTGGGAACCCTGCATACGCTCTCGGCGGCCAAGACCATCGATCGCATC
ATCGATGCCTTCCCCGGCCCCGAACAGGGCATGGTGCGGGCGATGCTGTCGGAATCCCTGCAGGCGGTCGTCTCGCAGGT
GCTGTTGAAGCGCTGTGGGGGCGGGCGCGTGGCGGCTCATGAAGTCATGGTCGCCACGCCGGCGGTGCGTAACCTGATTC
GCGAGGACAAGGTGGCGCAACTCCATTCGGTGCTGCAGACCGGCGCCGCCCAGGGCATGCAGACACTGGACACGGCGCTG
GCGCGGCTGGTGGCCGAGGGTGTGGTGGCGCCTGACGAGGCGCAGTCGCGGGCGCGCGCTCCCCTGAGGCGGTGA
Similar proteins
Only experimentally validated proteins are listed.