Detailed information NTG0061562

Bioinformatically predicted

Overview

• Name: comR/comR2
• Type: Regulator
• Locus tag: SII_RS08655
• Genome accession: NC_022237
• Coordinates: 1789233..1789706 (-)
• Length: 157 a.a.
• NCBI ID: WP_020998140.1
• Uniprot ID: -
• Organism: Streptococcus intermedius C270
• Function: activate transcription of late competence genes (predicted from homology) Competence regulation

Genomic Context

Location: 1784233..1794706

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SII_RS08655 (SII_1702)	comR/comR2	1789233..1789706 (-)	474	WP_020998140.1	sigma-70 family RNA polymerase sigma factor	Regulator
SII_RS08660 (SII_1703)	rplQ	1790625..1791011 (-)	387	WP_003075160.1	50S ribosomal protein L17	-
SII_RS08665 (SII_1704)	-	1791023..1791961 (-)	939	WP_020999215.1	DNA-directed RNA polymerase subunit alpha	-
SII_RS08670 (SII_1705)	rpsK	1792006..1792389 (-)	384	WP_001118385.1	30S ribosomal protein S11	-
SII_RS08675 (SII_1706)	rpsM	1792409..1792774 (-)	366	WP_003075165.1	30S ribosomal protein S13	-
SII_RS09850 (SII_1707)	rpmJ	1792790..1792906 (-)	117	WP_001808836.1	50S ribosomal protein L36	-
SII_RS08680 (SII_1708)	infA	1792931..1793149 (-)	219	WP_001029883.1	translation initiation factor IF-1	-
SII_RS08685 (SII_1709)	-	1793265..1793903 (-)	639	WP_003075167.1	adenylate kinase	-

Sequence

Protein

• Length: 157 a.a.
• Molecular weight: 19404.34 Da
• Isoelectric Point: 8.0146

>NTDB_id=61562 SII_RS08655 WP_020998140.1 1789233..1789706(-) (comR/comR2) [Streptococcus intermedius C270]
MDFKELYEKVRGIVLKCRREYYVHLWDLSDWDQEGMMVLYELVSRHPYLVEEEAHLYVYYKTKFRNHIKDILRKQESQKR
KLDRQVYEEVSEIGHKLSLKGLYLDELVILRDQLKSYQKQLSPAQQEQYERLLADERFKGRQAMLRELRTYLKDYEM

Nucleotide

• Length: 474 bp

>NTDB_id=61562 SII_RS08655 WP_020998140.1 1789233..1789706(-) (comR/comR2) [Streptococcus intermedius C270]
ATGGATTTCAAGGAGTTATATGAGAAAGTAAGGGGAATTGTGCTGAAGTGTCGGCGGGAATATTATGTCCATCTGTGGGA
TCTAAGCGATTGGGACCAAGAAGGGATGATGGTCTTGTATGAGTTGGTGAGTCGTCACCCCTATTTGGTAGAGGAAGAAG
CCCATCTCTATGTCTACTATAAGACAAAGTTTCGGAATCACATAAAGGATATTCTGCGCAAACAAGAAAGTCAAAAGCGC
AAACTGGATCGCCAAGTGTATGAAGAGGTAAGTGAGATTGGGCACAAGTTAAGTCTGAAAGGTCTGTATCTAGACGAGTT
GGTAATACTCCGCGATCAATTAAAGTCCTATCAAAAGCAACTGAGTCCCGCCCAGCAAGAGCAGTATGAGCGGTTACTGG
CAGATGAAAGGTTCAAAGGACGCCAAGCGATGCTTCGAGAGTTACGAACCTACTTAAAAGACTATGAGATGTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comR/comR2	Streptococcus gordonii str. Challis substr. CH1	60	98.726	0.592
comR/comR1	Streptococcus gordonii str. Challis substr. CH1	60	98.726	0.592
comX/sigX/comX2/sigX2	Streptococcus mitis NCTC 12261	55.484	98.726	0.548
comX/sigX/comX1/sigX1	Streptococcus mitis NCTC 12261	54.194	98.726	0.535
comX/comX2	Streptococcus pneumoniae Rx1	53.548	98.726	0.529
comX/comX1	Streptococcus pneumoniae Rx1	53.548	98.726	0.529
comX/comX2	Streptococcus pneumoniae D39	53.548	98.726	0.529
comX/comX1	Streptococcus pneumoniae D39	53.548	98.726	0.529
comX/comX2	Streptococcus pneumoniae R6	53.548	98.726	0.529
comX/comX1	Streptococcus pneumoniae R6	53.548	98.726	0.529
comX/sigX/comX2/sigX2	Streptococcus mitis SK321	53.548	98.726	0.529
comX/comX1	Streptococcus pneumoniae TIGR4	52.903	98.726	0.522
comX/comX2	Streptococcus pneumoniae TIGR4	52.903	98.726	0.522
comX/sigX/comX1/sigX1	Streptococcus mitis SK321	52.903	98.726	0.522
comX/sigX	Streptococcus suis isolate S10	50.323	98.726	0.497
comX/sigX	Streptococcus suis D9	50.323	98.726	0.497
comX/sigX	Streptococcus suis P1/7	50.323	98.726	0.497
comX/sigX	Streptococcus mutans UA159	50	98.089	0.49
comX/sigX/comX2/sigX2	Streptococcus pyogenes MGAS8232	43.871	98.726	0.433
comX/sigX/comX1/sigX1	Streptococcus pyogenes MGAS8232	43.871	98.726	0.433
comX/sigX/comX1/sigX1	Streptococcus pyogenes JRS4	43.871	98.726	0.433
comX/sigX/comX2/sigX2	Streptococcus pyogenes MGAS315	43.871	98.726	0.433
comX/sigX/comX1/sigX1	Streptococcus pyogenes MGAS315	43.871	98.726	0.433
comX/sigX/comX2/sigX2	Streptococcus pyogenes JRS4	43.871	98.726	0.433
comX	Streptococcus salivarius SK126	43.506	98.089	0.427
comX	Streptococcus thermophilus LMG 18311	42.857	98.089	0.42
comX/sigX	Streptococcus salivarius strain HSISS4	42.857	98.089	0.42
comX	Streptococcus thermophilus LMD-9	42.857	98.089	0.42
comX/sigX	Streptococcus infantarius subsp. infantarius ATCC BAA-102	40.385	99.363	0.401