Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | K5K89_RS27395 | Genome accession | NZ_CP081944 |
| Coordinates | 6041679..6042713 (-) | Length | 344 a.a. |
| NCBI ID | WP_222540587.1 | Uniprot ID | - |
| Organism | Pseudomonas sp. DR208 | ||
| Function | type IV pilus retraction (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 6036679..6047713
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K5K89_RS27365 (K5K89_27365) | ruvX | 6036777..6037214 (+) | 438 | WP_003195067.1 | Holliday junction resolvase RuvX | - |
| K5K89_RS27370 (K5K89_27370) | pyrR | 6037288..6037794 (+) | 507 | WP_058426562.1 | bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR | - |
| K5K89_RS27375 (K5K89_27375) | - | 6037819..6038823 (+) | 1005 | WP_058426561.1 | aspartate carbamoyltransferase catalytic subunit | - |
| K5K89_RS27380 (K5K89_27380) | - | 6038820..6040091 (+) | 1272 | WP_222540586.1 | dihydroorotase | - |
| K5K89_RS27385 (K5K89_27385) | - | 6040238..6040648 (-) | 411 | WP_162276412.1 | NINE protein | - |
| K5K89_RS27390 (K5K89_27390) | - | 6040917..6041552 (+) | 636 | WP_071490370.1 | C40 family peptidase | - |
| K5K89_RS27395 (K5K89_27395) | pilT | 6041679..6042713 (-) | 1035 | WP_222540587.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| K5K89_RS27400 (K5K89_27400) | - | 6042771..6043457 (+) | 687 | WP_092241976.1 | YggS family pyridoxal phosphate-dependent enzyme | - |
| K5K89_RS27405 (K5K89_27405) | proC | 6043491..6044309 (+) | 819 | WP_222540588.1 | pyrroline-5-carboxylate reductase | - |
| K5K89_RS27410 (K5K89_27410) | - | 6044319..6044909 (+) | 591 | WP_025859579.1 | YggT family protein | - |
| K5K89_RS27415 (K5K89_27415) | - | 6045029..6046168 (+) | 1140 | WP_071490374.1 | homoserine O-acetyltransferase | - |
| K5K89_RS27420 (K5K89_27420) | metW | 6046176..6046796 (+) | 621 | WP_034109956.1 | methionine biosynthesis protein MetW | - |
| K5K89_RS27425 (K5K89_27425) | - | 6046818..6047255 (+) | 438 | WP_222540589.1 | DUF4426 domain-containing protein | - |
Sequence
Protein
Download Length: 344 a.a. Molecular weight: 37427.20 Da Isoelectric Point: 6.8433
>NTDB_id=598625 K5K89_RS27395 WP_222540587.1 6041679..6042713(-) (pilT) [Pseudomonas sp. DR208]
MDITELLTASVRRGASDLHLSAGLAPMLRVDGEVWPLDGRVLSPPQVADLLSPLLNQHQQKDFETSLETDFAFELPGVAR
FRANVFRQERGMGAVFRAVPAEVQSLERLGLGEVFQRIAQLPRGLVLVTGPTGSGKSTTLAAMIDFLNQHRRQHILTLED
PIEFIHTPNMALINQRQVHRDTHSFSVALRSALREDPDVILVGELRDLETIRLALTAAETGHLVFGTLHTSSAAKTVDRL
VDVFPAGEKAMVRSMLSESLQAVVSQVLVKKIGGGRVAAHEIMLGTPAIRNLIREDKVAQMVSAIQTGGALGMKTLDMSL
KALVGEGVISREEAQQKARVPGEI
MDITELLTASVRRGASDLHLSAGLAPMLRVDGEVWPLDGRVLSPPQVADLLSPLLNQHQQKDFETSLETDFAFELPGVAR
FRANVFRQERGMGAVFRAVPAEVQSLERLGLGEVFQRIAQLPRGLVLVTGPTGSGKSTTLAAMIDFLNQHRRQHILTLED
PIEFIHTPNMALINQRQVHRDTHSFSVALRSALREDPDVILVGELRDLETIRLALTAAETGHLVFGTLHTSSAAKTVDRL
VDVFPAGEKAMVRSMLSESLQAVVSQVLVKKIGGGRVAAHEIMLGTPAIRNLIREDKVAQMVSAIQTGGALGMKTLDMSL
KALVGEGVISREEAQQKARVPGEI
Nucleotide
Download Length: 1035 bp
>NTDB_id=598625 K5K89_RS27395 WP_222540587.1 6041679..6042713(-) (pilT) [Pseudomonas sp. DR208]
ATGGATATCACTGAATTACTCACGGCCAGCGTGCGCCGTGGCGCCTCCGACCTGCATTTGTCCGCCGGACTGGCGCCGAT
GCTGCGGGTGGATGGGGAGGTCTGGCCGCTGGATGGGCGGGTGCTTTCACCCCCGCAAGTGGCCGACTTGTTGAGCCCAT
TGCTCAATCAGCACCAACAAAAGGATTTCGAAACATCTCTTGAAACGGATTTTGCCTTCGAACTGCCCGGTGTGGCGCGG
TTCCGCGCCAATGTGTTCCGGCAGGAGCGGGGCATGGGCGCGGTGTTTCGCGCCGTACCGGCCGAGGTCCAGAGCCTGGA
GCGCCTCGGCCTGGGGGAAGTATTCCAGCGTATCGCCCAGCTGCCGCGCGGCCTGGTGCTAGTGACCGGCCCTACCGGCT
CGGGCAAGTCTACGACTCTGGCGGCGATGATCGACTTTCTCAATCAGCATCGACGCCAGCACATCCTCACCCTTGAAGAC
CCCATCGAGTTTATCCACACGCCGAACATGGCATTGATCAACCAACGGCAGGTGCACCGCGACACCCATAGTTTTTCGGT
TGCCCTGCGCTCGGCGCTCAGGGAAGACCCGGACGTGATCCTGGTGGGTGAACTGCGCGACCTGGAAACCATCCGCCTGG
CCCTGACGGCGGCTGAGACCGGGCACCTGGTATTCGGCACCTTGCATACCTCGTCGGCGGCAAAGACCGTGGATCGGCTG
GTGGATGTGTTTCCGGCGGGGGAAAAGGCCATGGTCCGCTCGATGCTGTCGGAGTCGTTGCAGGCAGTGGTGTCCCAGGT
GCTGGTGAAGAAGATCGGCGGGGGGCGGGTGGCGGCCCATGAAATCATGTTGGGTACGCCGGCTATTCGCAATCTGATCC
GTGAGGACAAGGTGGCGCAGATGGTCTCGGCGATCCAGACGGGTGGGGCGCTGGGGATGAAGACGCTGGATATGAGCTTG
AAGGCGTTGGTCGGGGAGGGGGTGATCAGTCGGGAAGAGGCGCAGCAGAAGGCGAGGGTGCCTGGGGAAATATGA
ATGGATATCACTGAATTACTCACGGCCAGCGTGCGCCGTGGCGCCTCCGACCTGCATTTGTCCGCCGGACTGGCGCCGAT
GCTGCGGGTGGATGGGGAGGTCTGGCCGCTGGATGGGCGGGTGCTTTCACCCCCGCAAGTGGCCGACTTGTTGAGCCCAT
TGCTCAATCAGCACCAACAAAAGGATTTCGAAACATCTCTTGAAACGGATTTTGCCTTCGAACTGCCCGGTGTGGCGCGG
TTCCGCGCCAATGTGTTCCGGCAGGAGCGGGGCATGGGCGCGGTGTTTCGCGCCGTACCGGCCGAGGTCCAGAGCCTGGA
GCGCCTCGGCCTGGGGGAAGTATTCCAGCGTATCGCCCAGCTGCCGCGCGGCCTGGTGCTAGTGACCGGCCCTACCGGCT
CGGGCAAGTCTACGACTCTGGCGGCGATGATCGACTTTCTCAATCAGCATCGACGCCAGCACATCCTCACCCTTGAAGAC
CCCATCGAGTTTATCCACACGCCGAACATGGCATTGATCAACCAACGGCAGGTGCACCGCGACACCCATAGTTTTTCGGT
TGCCCTGCGCTCGGCGCTCAGGGAAGACCCGGACGTGATCCTGGTGGGTGAACTGCGCGACCTGGAAACCATCCGCCTGG
CCCTGACGGCGGCTGAGACCGGGCACCTGGTATTCGGCACCTTGCATACCTCGTCGGCGGCAAAGACCGTGGATCGGCTG
GTGGATGTGTTTCCGGCGGGGGAAAAGGCCATGGTCCGCTCGATGCTGTCGGAGTCGTTGCAGGCAGTGGTGTCCCAGGT
GCTGGTGAAGAAGATCGGCGGGGGGCGGGTGGCGGCCCATGAAATCATGTTGGGTACGCCGGCTATTCGCAATCTGATCC
GTGAGGACAAGGTGGCGCAGATGGTCTCGGCGATCCAGACGGGTGGGGCGCTGGGGATGAAGACGCTGGATATGAGCTTG
AAGGCGTTGGTCGGGGAGGGGGTGATCAGTCGGGAAGAGGCGCAGCAGAAGGCGAGGGTGCCTGGGGAAATATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.