Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | K1X80_RS27045 | Genome accession | NZ_CP080494 |
| Coordinates | 5970668..5971702 (-) | Length | 344 a.a. |
| NCBI ID | WP_057960884.1 | Uniprot ID | - |
| Organism | Pseudomonas sp. So3.2b | ||
| Function | type IV pilus retraction (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 5965668..5976702
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K1X80_RS27015 (K1X80_27015) | ruvX | 5965750..5966187 (+) | 438 | WP_005792259.1 | Holliday junction resolvase RuvX | - |
| K1X80_RS27020 (K1X80_27020) | pyrR | 5966270..5966776 (+) | 507 | WP_057444186.1 | bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR | - |
| K1X80_RS27025 (K1X80_27025) | - | 5966801..5967805 (+) | 1005 | WP_057440370.1 | aspartate carbamoyltransferase catalytic subunit | - |
| K1X80_RS27030 (K1X80_27030) | - | 5967802..5969073 (+) | 1272 | WP_057440371.1 | dihydroorotase | - |
| K1X80_RS27035 (K1X80_27035) | - | 5969236..5969664 (-) | 429 | WP_057440372.1 | TM2 domain-containing protein | - |
| K1X80_RS27040 (K1X80_27040) | - | 5969914..5970549 (+) | 636 | WP_057440373.1 | C40 family peptidase | - |
| K1X80_RS27045 (K1X80_27045) | pilT | 5970668..5971702 (-) | 1035 | WP_057960884.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| K1X80_RS27050 (K1X80_27050) | - | 5971760..5972446 (+) | 687 | WP_057960885.1 | YggS family pyridoxal phosphate-dependent enzyme | - |
| K1X80_RS27055 (K1X80_27055) | proC | 5972480..5973298 (+) | 819 | WP_057960886.1 | pyrroline-5-carboxylate reductase | - |
| K1X80_RS27060 (K1X80_27060) | - | 5973308..5973898 (+) | 591 | WP_057440376.1 | YggT family protein | - |
| K1X80_RS27065 (K1X80_27065) | - | 5974053..5975192 (+) | 1140 | WP_120734289.1 | homoserine O-acetyltransferase | - |
| K1X80_RS27070 (K1X80_27070) | metW | 5975200..5975820 (+) | 621 | WP_029300485.1 | methionine biosynthesis protein MetW | - |
| K1X80_RS27075 (K1X80_27075) | - | 5975842..5976276 (+) | 435 | WP_057960887.1 | DUF4426 domain-containing protein | - |
Sequence
Protein
Download Length: 344 a.a. Molecular weight: 37295.94 Da Isoelectric Point: 6.8923
>NTDB_id=593263 K1X80_RS27045 WP_057960884.1 5970668..5971702(-) (pilT) [Pseudomonas sp. So3.2b]
MDITELLAASVSQGASDLHLSAGLAPRMRVDGEVLPLDWPVLSATQVADLLSPILHKHQQKDFETSLETDFSFDLPGVAR
FRANVFCQHRGLGAVFRAIPSRVQSLEALGLGDIFRRIAELPRGLVLVTGATGSGKSTTLAAMVDYLNSTRQQHILTLED
PIEFVHEPRKALISQRQVHRDTHSFSTALRSALREDPDVILVGELRDLETIRLALTAAETGHLVFGTLHTSSAAKTVDRL
VDVFPAGEKAMVRSMLSESLQAVVSQVLLKKVGGGRVAAHEIMLGTPAIRNLIREDKVAQLYSAIQTGGALGMKTLDMSL
KGLVSQGLVRLEEAREQARVPADI
MDITELLAASVSQGASDLHLSAGLAPRMRVDGEVLPLDWPVLSATQVADLLSPILHKHQQKDFETSLETDFSFDLPGVAR
FRANVFCQHRGLGAVFRAIPSRVQSLEALGLGDIFRRIAELPRGLVLVTGATGSGKSTTLAAMVDYLNSTRQQHILTLED
PIEFVHEPRKALISQRQVHRDTHSFSTALRSALREDPDVILVGELRDLETIRLALTAAETGHLVFGTLHTSSAAKTVDRL
VDVFPAGEKAMVRSMLSESLQAVVSQVLLKKVGGGRVAAHEIMLGTPAIRNLIREDKVAQLYSAIQTGGALGMKTLDMSL
KGLVSQGLVRLEEAREQARVPADI
Nucleotide
Download Length: 1035 bp
>NTDB_id=593263 K1X80_RS27045 WP_057960884.1 5970668..5971702(-) (pilT) [Pseudomonas sp. So3.2b]
ATGGACATCACTGAACTGCTGGCCGCAAGCGTCAGCCAGGGCGCCTCCGACCTGCATCTGTCGGCAGGCTTGGCGCCGAG
GATGCGCGTCGATGGCGAGGTACTGCCACTGGATTGGCCGGTGCTGAGTGCTACGCAAGTAGCGGACTTGCTCAGCCCGA
TCCTCCATAAACACCAGCAAAAGGATTTCGAAACATCTCTTGAAACGGATTTTTCCTTCGATTTGCCTGGCGTCGCGCGC
TTTCGCGCCAACGTGTTCTGCCAGCACCGGGGGCTGGGGGCGGTGTTCCGTGCGATCCCCTCTCGGGTCCAGAGCCTGGA
AGCCCTGGGGCTGGGGGACATATTCCGGCGCATCGCCGAATTGCCCAGAGGGCTGGTGCTGGTGACCGGTGCCACGGGCT
CGGGCAAGTCCACCACCCTGGCGGCGATGGTCGATTACCTCAACAGCACCCGTCAGCAGCACATCCTGACCCTTGAAGAC
CCTATCGAGTTTGTCCACGAACCGCGTAAAGCGCTGATCAGCCAACGCCAGGTGCACCGCGACACCCACAGTTTCTCGAC
GGCCCTGCGTTCGGCGTTGCGCGAAGACCCGGATGTGATCCTGGTCGGCGAATTGCGCGACCTGGAAACCATCCGCCTGG
CCCTGACGGCGGCGGAAACCGGGCACTTGGTGTTTGGCACCCTGCACACCAGTTCGGCGGCGAAAACCGTGGATCGGCTG
GTGGATGTGTTTCCGGCGGGGGAAAAGGCCATGGTCCGCTCGATGCTCTCGGAATCGCTGCAGGCGGTGGTGTCCCAGGT
GTTGCTGAAGAAAGTCGGCGGCGGGCGCGTGGCGGCCCATGAAATCATGCTCGGCACACCGGCGATCCGCAACCTGATCC
GTGAGGACAAGGTGGCGCAGTTGTATTCGGCGATTCAGACGGGCGGGGCGCTGGGGATGAAGACGTTGGATATGAGCTTG
AAGGGGTTGGTCAGTCAGGGACTGGTCAGGCTTGAAGAGGCCCGGGAGCAGGCGCGGGTGCCCGCAGATATATAG
ATGGACATCACTGAACTGCTGGCCGCAAGCGTCAGCCAGGGCGCCTCCGACCTGCATCTGTCGGCAGGCTTGGCGCCGAG
GATGCGCGTCGATGGCGAGGTACTGCCACTGGATTGGCCGGTGCTGAGTGCTACGCAAGTAGCGGACTTGCTCAGCCCGA
TCCTCCATAAACACCAGCAAAAGGATTTCGAAACATCTCTTGAAACGGATTTTTCCTTCGATTTGCCTGGCGTCGCGCGC
TTTCGCGCCAACGTGTTCTGCCAGCACCGGGGGCTGGGGGCGGTGTTCCGTGCGATCCCCTCTCGGGTCCAGAGCCTGGA
AGCCCTGGGGCTGGGGGACATATTCCGGCGCATCGCCGAATTGCCCAGAGGGCTGGTGCTGGTGACCGGTGCCACGGGCT
CGGGCAAGTCCACCACCCTGGCGGCGATGGTCGATTACCTCAACAGCACCCGTCAGCAGCACATCCTGACCCTTGAAGAC
CCTATCGAGTTTGTCCACGAACCGCGTAAAGCGCTGATCAGCCAACGCCAGGTGCACCGCGACACCCACAGTTTCTCGAC
GGCCCTGCGTTCGGCGTTGCGCGAAGACCCGGATGTGATCCTGGTCGGCGAATTGCGCGACCTGGAAACCATCCGCCTGG
CCCTGACGGCGGCGGAAACCGGGCACTTGGTGTTTGGCACCCTGCACACCAGTTCGGCGGCGAAAACCGTGGATCGGCTG
GTGGATGTGTTTCCGGCGGGGGAAAAGGCCATGGTCCGCTCGATGCTCTCGGAATCGCTGCAGGCGGTGGTGTCCCAGGT
GTTGCTGAAGAAAGTCGGCGGCGGGCGCGTGGCGGCCCATGAAATCATGCTCGGCACACCGGCGATCCGCAACCTGATCC
GTGAGGACAAGGTGGCGCAGTTGTATTCGGCGATTCAGACGGGCGGGGCGCTGGGGATGAAGACGTTGGATATGAGCTTG
AAGGGGTTGGTCAGTCAGGGACTGGTCAGGCTTGAAGAGGCCCGGGAGCAGGCGCGGGTGCCCGCAGATATATAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.