Detailed information NTG0589743

Bioinformatically predicted

Overview

• Name: amiC
• Type: Regulator
• Locus tag: LPB404_RS02765
• Genome accession: NZ_CP079821
• Coordinates: 545507..547006 (+)
• Length: 499 a.a.
• NCBI ID: WP_023022220.1
• Uniprot ID: -
• Organism: Streptococcus rubneri strain LPB0404
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 540507..552006

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LPB404_RS02755 (LPB404_02755)	amiA3	541301..543265 (+)	1965	WP_219074982.1	peptide ABC transporter substrate-binding protein	Regulator
LPB404_RS02760 (LPB404_02760)	amiA3	543457..545442 (+)	1986	WP_219074983.1	peptide ABC transporter substrate-binding protein	Regulator
LPB404_RS02765 (LPB404_02765)	amiC	545507..547006 (+)	1500	WP_023022220.1	ABC transporter permease	Regulator
LPB404_RS02770 (LPB404_02770)	amiD	547006..547932 (+)	927	WP_023022222.1	oligopeptide ABC transporter permease OppC	Regulator
LPB404_RS02775 (LPB404_02775)	amiE	547944..549011 (+)	1068	WP_219074984.1	ABC transporter ATP-binding protein	Regulator
LPB404_RS02780 (LPB404_02780)	amiF	549021..549944 (+)	924	WP_219074985.1	ATP-binding cassette domain-containing protein	Regulator

Sequence

Protein

• Length: 499 a.a.
• Molecular weight: 55662.93 Da
• Isoelectric Point: 10.0795

>NTDB_id=589743 LPB404_RS02765 WP_023022220.1 545507..547006(+) (amiC) [Streptococcus rubneri strain LPB0404]
MKKYIFMRILRSLVSIFLVTTLTYTIIYTLTPRNLIFKNDPNYNKIAKTKDSKINYENTVYDRMGYIEYLDSKALKEKAS
KEDSSVTVEPTKENEKIYKKYISNLGNGWVLKRFPENKGFYATREVPVFERVIGFYGNLIQIDHPNVIKDASNPKLERYI
RIENDPAIGWSVVGSGTKHKYLLYFNGQFPFIHQNFVSLNLGESYPTYSNTPVLQVITQGQGTTKKSEVNFPTGKKESSI
NIYSRTYKSPSKADAQDIARFGKGDAYTATLSNYENPSMIVSSAIIGLIGIAIAYLIAIPLGSYMALLKNTWFDSASTAT
LTFMMSLPTIALVYIVRLAGSSIGLPDSFPVLGAQDWRSYVLPSVILGLLSAPGLAVWIRRYMIDLHSQDFVRFARAKGL
SEKEISRKHIFKNAMVPIVTGIPVQLVLVISGATLTETVFAFPGMGKMLIDSIKASNNTMVVGLVFIFTVLAVFGAMAGD
ILMVMVDPRIKLTTKKGGK

Nucleotide

• Length: 1500 bp

>NTDB_id=589743 LPB404_RS02765 WP_023022220.1 545507..547006(+) (amiC) [Streptococcus rubneri strain LPB0404]
ATGAAAAAATATATATTTATGCGTATTTTACGTTCGTTGGTGTCGATCTTTTTGGTTACGACATTGACGTATACAATTAT
TTATACGCTAACCCCAAGAAATTTAATTTTCAAAAACGACCCTAACTATAACAAGATTGCGAAAACAAAAGACTCTAAAA
TCAATTATGAAAATACAGTCTATGATCGCATGGGGTATATAGAATATCTTGATTCAAAAGCTTTGAAAGAAAAAGCAAGC
AAGGAAGACTCATCAGTAACAGTAGAGCCTACTAAAGAAAACGAGAAGATCTACAAAAAGTACATTTCTAACCTTGGAAA
TGGCTGGGTATTGAAACGTTTCCCTGAAAACAAAGGTTTTTACGCTACTCGTGAAGTCCCTGTCTTTGAACGTGTTATTG
GATTCTATGGTAATCTGATTCAGATTGACCATCCAAATGTCATCAAAGATGCTTCTAATCCAAAACTTGAACGCTATATT
CGAATTGAAAATGACCCAGCTATTGGTTGGTCAGTAGTTGGTTCGGGGACTAAACATAAATATCTTTTGTATTTCAATGG
TCAATTCCCGTTCATTCATCAAAATTTTGTATCCTTAAACTTGGGTGAATCTTACCCAACTTATTCAAATACACCTGTTC
TTCAGGTTATTACACAAGGACAAGGTACAACTAAGAAGAGTGAAGTAAACTTCCCAACAGGAAAAAAAGAATCTTCTATC
AATATCTACTCTCGTACATACAAATCACCAAGCAAGGCAGATGCTCAAGATATCGCCCGCTTTGGTAAAGGAGATGCTTA
TACAGCAACATTGAGCAACTATGAAAATCCATCCATGATTGTGAGCTCAGCCATTATCGGTTTAATCGGGATTGCGATTG
CCTACTTGATTGCTATTCCTTTAGGATCTTATATGGCCTTGTTGAAGAATACTTGGTTTGATAGTGCATCTACGGCAACT
TTAACATTTATGATGTCATTGCCGACGATTGCCTTGGTTTACATCGTTCGCTTGGCTGGCTCTTCTATCGGCTTACCAGA
TTCCTTCCCAGTGTTAGGGGCTCAGGATTGGCGCTCTTATGTACTACCTTCTGTGATTTTGGGTCTCTTGAGTGCACCAG
GATTGGCAGTTTGGATTCGCCGTTACATGATCGACTTGCATTCTCAAGACTTTGTCCGTTTTGCACGTGCCAAAGGGCTT
TCTGAGAAAGAAATTTCCCGCAAACATATCTTCAAAAACGCCATGGTTCCGATCGTTACAGGGATTCCTGTTCAATTGGT
TCTAGTCATTTCAGGGGCAACTTTGACAGAAACTGTCTTTGCCTTCCCTGGTATGGGTAAAATGTTGATTGATTCTATCA
AGGCATCCAATAATACCATGGTAGTTGGTCTTGTCTTCATCTTTACTGTTCTTGCTGTATTTGGAGCAATGGCTGGAGAT
ATCCTTATGGTTATGGTAGACCCTCGTATCAAACTAACAACTAAGAAAGGAGGCAAATAA

Domains

Predicted by InterproScan.

• Binding-protein-dependent transport system inner membrane component (BPD_transp_1) (298-491)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiC	Streptococcus salivarius strain HSISS4	72.745	100	0.727
amiC	Streptococcus thermophilus LMD-9	72.345	100	0.723
amiC	Streptococcus thermophilus LMG 18311	72.345	100	0.723