Detailed information NTG0582884

Bioinformatically predicted

Overview

• Name: pilT
• Type: Machinery gene
• Locus tag: KQP93_RS14185
• Genome accession: NZ_CP077770
• Coordinates: 3053510..3054550 (-)
• Length: 346 a.a.
• NCBI ID: WP_217874943.1
• Uniprot ID: -
• Organism: Pseudoalteromonas shioyasakiensis strain SDCH90
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3048510..3059550

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KQP93_RS14155	rsmE	3048685..3049419 (+)	735	WP_217874938.1	16S rRNA (uracil(1498)-N(3))-methyltransferase	-
KQP93_RS14160	gshB	3049488..3050441 (+)	954	WP_217874939.1	glutathione synthase	-
KQP93_RS14165	-	3050466..3051023 (+)	558	WP_217874940.1	YqgE/AlgH family protein	-
KQP93_RS14170	ruvX	3051043..3051492 (+)	450	WP_217874941.1	Holliday junction resolvase RuvX	-
KQP93_RS14175	-	3051489..3052361 (-)	873	WP_254907678.1	hypothetical protein	-
KQP93_RS14180	pilU	3052362..3053495 (-)	1134	WP_217874942.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
KQP93_RS14185	pilT	3053510..3054550 (-)	1041	WP_217874943.1	type IV pilus twitching motility protein PilT	Machinery gene
KQP93_RS14190	-	3054553..3055266 (+)	714	WP_217874944.1	YggS family pyridoxal phosphate-dependent enzyme	-
KQP93_RS14195	proC	3055284..3056105 (+)	822	WP_217874945.1	pyrroline-5-carboxylate reductase	-
KQP93_RS14200	-	3056129..3056662 (+)	534	WP_054562743.1	YggT family protein	-
KQP93_RS14205	-	3056721..3057161 (+)	441	WP_217874946.1	DUF4426 domain-containing protein	-
KQP93_RS14210	-	3057169..3057768 (+)	600	WP_217874947.1	XTP/dITP diphosphatase	-
KQP93_RS14215	hemW	3057765..3058898 (+)	1134	WP_217874948.1	radical SAM family heme chaperone HemW	-

Sequence

Protein

• Length: 346 a.a.
• Molecular weight: 38252.47 Da
• Isoelectric Point: 6.0831

>NTDB_id=582884 KQP93_RS14185 WP_217874943.1 3053510..3054550(-) (pilT) [Pseudoalteromonas shioyasakiensis strain SDCH90]
MDITELLAFSVQHKASDLHLSSGVSPMIRVDGDVRRINIPALEQKDVNSLVYDIMNDNQRKDYEQNLEVDFSFEVPNLAR
FRVNAFNSNRGPAAVFRTIPSDVLTLDDLGAPDIFKTISDNPRGLVLVTGPTGSGKSTTLAAMVDYINQNKHHHILTIED
PIEFVHENKLSLINQREVHRDTHSFSNALRSALREDPDVILVGELRDLETIRLAMTAAETGHLVFGTLHTTSAPKTIDRI
IDVFPGEEKDMVRSMLSESLRAVISQTLLKKVGGGRVAAHEIMIGIPAIRNLIREDKIAQMYSSIQTGASHGMQTMDQCL
ASLVNYGIITTNDARAKAQDKTQFGG

Nucleotide

• Length: 1041 bp

>NTDB_id=582884 KQP93_RS14185 WP_217874943.1 3053510..3054550(-) (pilT) [Pseudoalteromonas shioyasakiensis strain SDCH90]
ATGGATATTACCGAATTATTGGCCTTTAGTGTGCAACACAAAGCCTCGGATTTACACTTGTCATCAGGCGTATCACCTAT
GATACGTGTTGATGGTGATGTGCGTCGTATTAATATTCCAGCATTAGAACAAAAAGATGTAAATAGTCTGGTATACGATA
TTATGAACGATAATCAGCGTAAGGACTACGAACAAAACCTTGAAGTGGATTTTTCTTTCGAAGTACCAAACCTTGCGCGT
TTTCGTGTTAACGCATTTAATTCAAACCGTGGCCCTGCGGCGGTGTTTCGTACTATCCCAAGTGATGTTTTAACGCTGGA
TGATTTAGGTGCGCCTGATATTTTTAAAACCATTTCCGATAATCCACGTGGTTTGGTGCTAGTCACCGGGCCAACGGGTT
CTGGTAAATCAACCACATTAGCGGCGATGGTTGATTACATTAACCAAAATAAGCATCACCATATTTTAACTATCGAAGAT
CCAATCGAATTCGTACACGAGAATAAACTGAGCCTTATTAACCAGCGTGAAGTTCATCGTGATACACATAGCTTCTCTAA
TGCGCTTAGAAGCGCATTACGTGAAGATCCGGATGTAATCTTAGTGGGTGAGCTGCGTGACCTTGAAACAATTCGCTTAG
CGATGACCGCGGCAGAAACAGGTCACTTGGTGTTTGGTACCTTGCATACCACATCTGCACCAAAAACCATTGACCGTATT
ATTGACGTATTCCCAGGTGAAGAAAAAGACATGGTACGTTCAATGTTGTCAGAATCATTACGTGCCGTAATCTCGCAAAC
TTTACTTAAAAAAGTGGGCGGTGGCCGAGTAGCAGCTCACGAGATTATGATAGGAATTCCTGCAATCCGAAACTTGATCC
GTGAAGATAAAATTGCACAAATGTATTCATCAATTCAAACCGGTGCATCGCATGGTATGCAGACCATGGATCAATGTTTA
GCAAGCTTAGTTAACTACGGTATTATTACAACCAATGATGCGCGTGCTAAAGCGCAAGATAAAACCCAGTTTGGTGGTTA
A

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (11-271)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilT	Acinetobacter baumannii D1279779	78.198	99.422	0.777
pilT	Acinetobacter baumannii strain A118	78.198	99.422	0.777
pilT	Acinetobacter nosocomialis M2	78.198	99.422	0.777
pilT	Acinetobacter baylyi ADP1	77.616	99.422	0.772
pilT	Pseudomonas stutzeri DSM 10701	77.035	99.422	0.766
pilT	Pseudomonas aeruginosa PAK	76.453	99.422	0.76
pilT	Legionella pneumophila strain Lp02	72.384	99.422	0.72
pilT	Legionella pneumophila strain ERS1305867	72.384	99.422	0.72
pilT	Neisseria meningitidis 8013	70.968	98.555	0.699
pilT	Vibrio cholerae O1 biovar El Tor strain E7946	71.091	97.977	0.697
pilT	Vibrio cholerae strain A1552	71.091	97.977	0.697
pilT	Neisseria gonorrhoeae MS11	70.674	98.555	0.697
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	52.174	99.711	0.52
pilU	Vibrio cholerae strain A1552	42.09	96.821	0.408
pilU	Acinetobacter baylyi ADP1	39.412	98.266	0.387
pilU	Pseudomonas stutzeri DSM 10701	40	96.821	0.387