Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   L1A17_RS04795 Genome accession   NZ_CP090886
Coordinates   922833..923543 (-) Length   236 a.a.
NCBI ID   WP_000760673.1    Uniprot ID   A0A0H2URH4
Organism   Streptococcus pneumoniae strain NP7513     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 917833..928543
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  L1A17_RS04775 (L1A17_04775) amiD 918338..919264 (+) 927 WP_000103701.1 oligopeptide ABC transporter permease OppC Regulator
  L1A17_RS04780 (L1A17_04780) amiE 919273..920340 (+) 1068 WP_000159554.1 oligopeptide/dipeptide ABC transporter ATP-binding protein Regulator
  L1A17_RS04785 (L1A17_04785) - 920351..921277 (+) 927 WP_001291296.1 ATP-binding cassette domain-containing protein -
  L1A17_RS04790 (L1A17_04790) - 921352..922678 (-) 1327 Protein_897 transposase -
  L1A17_RS04795 (L1A17_04795) treR 922833..923543 (-) 711 WP_000760673.1 trehalose operon repressor Regulator
  L1A17_RS04800 (L1A17_04800) treP 923728..925695 (+) 1968 WP_000514329.1 PTS system trehalose-specific EIIBC component -
  L1A17_RS04805 (L1A17_04805) treC 925873..927498 (+) 1626 WP_000171222.1 alpha,alpha-phosphotrehalase -
  L1A17_RS04810 (L1A17_04810) - 927754..928002 (+) 249 WP_000364990.1 YneF family protein -

Sequence

Protein


Download         Length: 236 a.a.        Molecular weight: 27607.78 Da        Isoelectric Point: 8.9698

>NTDB_id=556870 L1A17_RS04795 WP_000760673.1 922833..923543(-) (treR) [Streptococcus pneumoniae strain NP7513]
MKKYQQLFKQIQETIQNETYAVGDFLPSEHDLMEQYQVSRDTVRKALSLLQEEGLIKKIRGQGSQVVKEETVNFPVSNLT
SYQELVKELGLRSKTNVVSLDKIIIDKKSSLITGFPEFRMVWKVVRQRVVDDLVSVLDTDYLDMELIPNLTRQIAEQSIY
SYIENGLKLLIDYAQKEITIDHSSDRDKILMDIGKDPYVVSIKSKVYLQDGRQFQFTESRHKLEKFRFVDFAKRKK

Nucleotide


Download         Length: 711 bp        

>NTDB_id=556870 L1A17_RS04795 WP_000760673.1 922833..923543(-) (treR) [Streptococcus pneumoniae strain NP7513]
ATGAAGAAATACCAACAATTATTTAAGCAAATCCAAGAAACCATTCAAAACGAGACTTACGCTGTCGGAGATTTCCTTCC
TAGCGAGCACGACCTTATGGAGCAATATCAAGTGAGTCGTGATACCGTCCGAAAGGCCCTGTCTCTCCTCCAAGAGGAAG
GATTGATCAAAAAGATAAGAGGGCAAGGTTCTCAAGTCGTCAAAGAAGAAACCGTCAATTTCCCTGTATCCAACCTAACC
AGCTACCAAGAACTAGTTAAAGAACTTGGACTGCGCTCTAAAACCAACGTGGTCAGTCTGGACAAGATTATTATTGATAA
AAAATCCTCACTGATAACCGGTTTCCCAGAGTTTCGGATGGTTTGGAAGGTGGTCCGCCAGCGTGTGGTGGATGATCTGG
TATCCGTTCTGGATACAGACTATCTGGATATGGAACTAATTCCAAATCTCACTCGCCAAATTGCTGAGCAGTCTATCTAT
TCTTATATAGAAAATGGCCTCAAACTCCTTATTGATTATGCTCAGAAGGAAATCACCATTGACCACTCAAGCGACCGAGA
CAAGATTCTCATGGACATTGGCAAAGACCCTTATGTCGTTTCGATTAAATCAAAAGTCTATCTCCAAGACGGACGCCAAT
TTCAGTTTACCGAAAGTCGCCATAAGTTAGAAAAATTTAGATTTGTAGATTTTGCAAAACGCAAGAAATAA

Domains

Predicted by InterProScan.

Bacterial regulatory proteins, gntR family (GntR)

(3-66)

UTRA domain (UTRA)

(89-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2URH4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

59.322

100

0.593