Detailed information NTG0540211

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: LL045_RS09585
• Genome accession: NZ_CP086083
• Coordinates: 1985293..1986252 (-)
• Length: 319 a.a.
• NCBI ID: WP_058206353.1
• Uniprot ID: -
• Organism: Lactococcus lactis subsp. lactis strain EIP20A
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1980293..1991252

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LL045_RS09565 (LL045_09550)	-	1980603..1981349 (-)	747	WP_038601940.1	tyrosine-protein phosphatase	-
LL045_RS09570 (LL045_09555)	-	1981551..1983353 (-)	1803	WP_195362554.1	oligopeptide ABC transporter substrate-binding protein	-
LL045_RS09575 (LL045_09560)	oppC	1983459..1984343 (-)	885	WP_104141455.1	murein tripeptide/oligopeptide ABC transporter permease OppC	-
LL045_RS09580 (LL045_09565)	oppB	1984353..1985312 (-)	960	WP_038601948.1	murein tripeptide/oligopeptide ABC transporter permease OppB	-
LL045_RS09585 (LL045_09570)	amiE	1985293..1986252 (-)	960	WP_058206353.1	murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppF	Regulator
LL045_RS09590 (LL045_09575)	oppD	1986249..1987265 (-)	1017	Protein_1868	murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppD	-
LL045_RS09595 (LL045_09580)	rplT	1987491..1987850 (-)	360	WP_003132352.1	50S ribosomal protein L20	-
LL045_RS09600 (LL045_09585)	rpmI	1988045..1988245 (-)	201	WP_003132353.1	50S ribosomal protein L35	-
LL045_RS09605 (LL045_09590)	infC	1988374..1988868 (-)	495	WP_003132354.1	translation initiation factor IF-3	-
LL045_RS09610 (LL045_09595)	-	1989443..1990765 (-)	1323	WP_095348220.1	ISLre2 family transposase	-

Sequence

Protein

• Length: 319 a.a.
• Molecular weight: 36004.24 Da
• Isoelectric Point: 9.2904

>NTDB_id=540211 LL045_RS09585 WP_058206353.1 1985293..1986252(-) (amiE) [Lactococcus lactis subsp. lactis strain EIP20A]
MSEILNLKDLKVYYPIRSGFFNRVTDNVLAVDGVDLTIHEGETVGLVGESGSGKSTIGKTIVGLEQMTSGQLIYKGQDVS
KKKIRNQLKYNKEVQMIFQDAFSSLNPRKTIYDIIAEPIRNFEKLDAKTENKRIHELLDIVGLPKQALEQYPFQFSGGQQ
QRIGIARAVATNPKLIVADEPVSALDLSVQAQVLNFMKLIQKNLGIAFLFISHDLGVVRHMTDNIAVMHNGRIVEKGTRR
DIFDEPQHIYTKRLLSAIPSIDVTRRAENRENRLKVEQDFEDKKANFYDKDGHALPLKKISESHWAALPKGGENVESNY

Nucleotide

• Length: 960 bp

>NTDB_id=540211 LL045_RS09585 WP_058206353.1 1985293..1986252(-) (amiE) [Lactococcus lactis subsp. lactis strain EIP20A]
GTGAGCGAAATTCTTAATTTAAAGGACTTAAAAGTTTATTATCCTATTCGATCTGGTTTCTTTAATCGAGTGACAGATAA
TGTTTTAGCCGTTGATGGAGTAGATTTAACGATTCATGAAGGAGAAACTGTCGGTTTAGTTGGTGAATCTGGCTCTGGAA
AATCAACGATTGGCAAAACAATTGTTGGTTTAGAACAAATGACATCAGGACAATTGATTTACAAAGGACAAGATGTCAGC
AAGAAAAAGATAAGAAACCAGCTCAAATACAATAAAGAGGTTCAAATGATTTTTCAAGATGCATTTTCGAGTTTGAATCC
ACGGAAAACAATTTACGATATCATTGCGGAGCCTATTCGGAATTTTGAAAAATTAGATGCTAAGACAGAAAATAAACGGA
TTCATGAATTATTGGATATTGTTGGACTACCTAAACAAGCTTTAGAACAGTATCCTTTCCAATTTTCTGGAGGTCAACAA
CAAAGAATTGGAATCGCACGGGCAGTTGCTACTAATCCTAAGTTAATTGTGGCAGATGAACCAGTTTCAGCATTAGACTT
ATCTGTTCAAGCTCAAGTTTTGAATTTCATGAAGCTCATTCAAAAGAACTTGGGAATTGCATTTCTTTTTATTTCTCATG
ATTTAGGGGTTGTCCGCCATATGACCGATAATATTGCAGTCATGCACAACGGTCGAATTGTCGAAAAAGGAACACGAAGA
GATATTTTTGATGAGCCACAGCACATTTATACTAAACGACTCTTATCTGCTATCCCTTCGATCGATGTTACAAGAAGAGC
GGAAAATCGGGAAAACCGTCTAAAAGTTGAACAAGACTTTGAGGATAAAAAAGCAAACTTTTATGATAAAGACGGACACG
CTTTGCCCTTAAAAAAAATAAGTGAGAGCCATTGGGCAGCTTTGCCAAAAGGAGGGGAAAATGTGGAAAGTAATTATTAG

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (32-182)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (234-271)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	36.254	100	0.376
amiE	Streptococcus thermophilus LMG 18311	36.254	100	0.376
amiE	Streptococcus thermophilus LMD-9	36.254	100	0.376
oppD	Streptococcus mutans UA159	38.538	94.357	0.364
amiF	Streptococcus thermophilus LMD-9	47.718	75.549	0.361
amiF	Streptococcus thermophilus LMG 18311	47.718	75.549	0.361