Detailed information NTG0051903

Bioinformatically predicted

Overview

• Name: comR/comR2
• Type: Regulator
• Locus tag: SCIM_RS08520
• Genome accession: NC_018073
• Coordinates: 1749492..1749965 (-)
• Length: 157 a.a.
• NCBI ID: WP_014829824.1
• Uniprot ID: -
• Organism: Streptococcus intermedius JTH08
• Function: activate transcription of late competence genes (predicted from homology) Competence regulation

Genomic Context

Location: 1744492..1754965

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SCIM_RS08520 (SCIM_1527)	comR/comR2	1749492..1749965 (-)	474	WP_014829824.1	hypothetical protein	Regulator
SCIM_RS08530 (SCIM_1528)	rplQ	1750897..1751283 (-)	387	WP_003075160.1	50S ribosomal protein L17	-
SCIM_RS08535 (SCIM_1529)	-	1751295..1752233 (-)	939	WP_003077134.1	DNA-directed RNA polymerase subunit alpha	-
SCIM_RS08540 (SCIM_1530)	rpsK	1752278..1752661 (-)	384	WP_001118385.1	30S ribosomal protein S11	-
SCIM_RS08545 (SCIM_1531)	rpsM	1752681..1753046 (-)	366	WP_002262317.1	30S ribosomal protein S13	-
SCIM_RS09755 (SCIM_1532)	rpmJ	1753062..1753178 (-)	117	WP_001808836.1	50S ribosomal protein L36	-
SCIM_RS08550 (SCIM_1533)	infA	1753203..1753421 (-)	219	WP_001029883.1	translation initiation factor IF-1	-
SCIM_RS08555 (SCIM_1534)	-	1753537..1754175 (-)	639	WP_003075167.1	adenylate kinase	-

Sequence

Protein

• Length: 157 a.a.
• Molecular weight: 19347.33 Da
• Isoelectric Point: 7.8842

>NTDB_id=51903 SCIM_RS08520 WP_014829824.1 1749492..1749965(-) (comR/comR2) [Streptococcus intermedius JTH08]
MDFKELYEKVRGIVLKCRREYYVHLWELSDWDQEGMIVLYELVSCHPYLVEEEAHLYVYYKTKFRNHIKDILRKQESQKR
KLDRQVYEEVSEIGHKLSLKGLYLDELVILRDQLKSYQKQLSPAKQEQYERLLADERFKGRQAMLRELRTYLKDYEM

Nucleotide

• Length: 474 bp

>NTDB_id=51903 SCIM_RS08520 WP_014829824.1 1749492..1749965(-) (comR/comR2) [Streptococcus intermedius JTH08]
ATGGATTTCAAGGAGTTATATGAGAAAGTAAGGGGAATTGTGCTGAAGTGTCGGCGGGAATATTATGTCCATCTGTGGGA
GCTAAGCGATTGGGATCAAGAAGGGATGATAGTCTTGTATGAGTTGGTAAGTTGCCACCCCTATTTGGTAGAGGAAGAAG
CCCATCTCTATGTCTACTATAAGACAAAGTTTCGGAATCACATAAAGGATATTCTGCGCAAACAAGAAAGTCAAAAGCGC
AAACTGGATCGCCAAGTGTATGAAGAGGTAAGTGAGATTGGGCACAAGTTAAGTCTGAAAGGTCTGTATCTAGACGAGTT
GGTAATACTCCGCGATCAATTAAAGTCCTATCAAAAGCAACTGAGTCCCGCCAAGCAAGAGCAGTATGAGCGGTTACTGG
CAGATGAAAGGTTCAAAGGCCGCCAAGCGATGCTTCGAGAGTTACGAACCTACTTAAAAGACTATGAGATGTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comR/comR1	Streptococcus gordonii str. Challis substr. CH1	60.645	98.726	0.599
comR/comR2	Streptococcus gordonii str. Challis substr. CH1	60.645	98.726	0.599
comX/sigX/comX2/sigX2	Streptococcus mitis NCTC 12261	56.774	98.726	0.561
comX/sigX/comX1/sigX1	Streptococcus mitis NCTC 12261	55.484	98.726	0.548
comX/sigX/comX2/sigX2	Streptococcus mitis SK321	54.839	98.726	0.541
comX/sigX/comX1/sigX1	Streptococcus mitis SK321	54.839	98.726	0.541
comX/comX1	Streptococcus pneumoniae D39	54.194	98.726	0.535
comX/comX1	Streptococcus pneumoniae R6	54.194	98.726	0.535
comX/comX2	Streptococcus pneumoniae R6	54.194	98.726	0.535
comX/comX2	Streptococcus pneumoniae Rx1	54.194	98.726	0.535
comX/comX1	Streptococcus pneumoniae Rx1	54.194	98.726	0.535
comX/comX2	Streptococcus pneumoniae D39	54.194	98.726	0.535
comX/comX1	Streptococcus pneumoniae TIGR4	53.548	98.726	0.529
comX/comX2	Streptococcus pneumoniae TIGR4	53.548	98.726	0.529
comX/sigX	Streptococcus mutans UA159	50.649	98.089	0.497
comX/sigX	Streptococcus suis D9	48.387	98.726	0.478
comX/sigX	Streptococcus suis isolate S10	48.387	98.726	0.478
comX/sigX	Streptococcus suis P1/7	48.387	98.726	0.478
comX/sigX/comX2/sigX2	Streptococcus pyogenes MGAS315	43.226	98.726	0.427
comX/sigX/comX1/sigX1	Streptococcus pyogenes MGAS315	43.226	98.726	0.427
comX/sigX/comX2/sigX2	Streptococcus pyogenes JRS4	43.226	98.726	0.427
comX/sigX/comX1/sigX1	Streptococcus pyogenes JRS4	43.226	98.726	0.427
comX/sigX/comX2/sigX2	Streptococcus pyogenes MGAS8232	43.226	98.726	0.427
comX/sigX/comX1/sigX1	Streptococcus pyogenes MGAS8232	43.226	98.726	0.427
comX	Streptococcus salivarius SK126	42.208	98.089	0.414
comX/sigX	Streptococcus salivarius strain HSISS4	41.558	98.089	0.408
comX	Streptococcus thermophilus LMG 18311	41.558	98.089	0.408
comX	Streptococcus thermophilus LMD-9	41.558	98.089	0.408
comX/sigX	Streptococcus infantarius subsp. infantarius ATCC BAA-102	40.385	99.363	0.401