Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | KIM04_RS22445 | Genome accession | NZ_CP074932 |
| Coordinates | 4448356..4449336 (-) | Length | 326 a.a. |
| NCBI ID | WP_001055633.1 | Uniprot ID | - |
| Organism | Escherichia coli strain 07_3337 | ||
| Function | power the assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 4443356..4454336
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KIM04_RS22415 (KIM04_22150) | yggI | 4444019..4444516 (+) | 498 | WP_000858396.1 | SprT family zinc-dependent metalloprotease | - |
| KIM04_RS22420 (KIM04_22155) | endA | 4444611..4445318 (+) | 708 | WP_000286500.1 | deoxyribonuclease I | - |
| KIM04_RS22425 (KIM04_22160) | rsmE | 4445398..4446129 (+) | 732 | WP_001222508.1 | 16S rRNA (uracil(1498)-N(3))-methyltransferase | - |
| KIM04_RS22430 (KIM04_22165) | gshB | 4446142..4447092 (+) | 951 | WP_032345038.1 | glutathione synthase | - |
| KIM04_RS22435 (KIM04_22170) | yqgE | 4447201..4447764 (+) | 564 | WP_001053178.1 | YqgE/AlgH family protein | - |
| KIM04_RS22440 (KIM04_22175) | ruvX | 4447764..4448180 (+) | 417 | WP_000017111.1 | Holliday junction resolvase RuvX | - |
| KIM04_RS22445 (KIM04_22180) | pilT | 4448356..4449336 (-) | 981 | WP_001055633.1 | PilT/PilU family type 4a pilus ATPase | Machinery gene |
| KIM04_RS22450 (KIM04_22185) | yggS | 4449354..4450058 (+) | 705 | WP_000997795.1 | pyridoxal phosphate homeostasis protein | - |
| KIM04_RS22455 (KIM04_22190) | yggT | 4450076..4450642 (+) | 567 | WP_001094831.1 | osmotic shock tolerance protein YggT | - |
| KIM04_RS22460 (KIM04_22195) | yggU | 4450639..4450929 (+) | 291 | WP_001277222.1 | DUF167 family protein YggU | - |
| KIM04_RS22465 (KIM04_22200) | rdgB | 4450937..4451530 (+) | 594 | WP_001174742.1 | XTP/dITP diphosphatase | - |
| KIM04_RS22470 (KIM04_22205) | hemW | 4451523..4452659 (+) | 1137 | WP_000239919.1 | radical SAM family heme chaperone HemW | - |
| KIM04_RS22475 (KIM04_22210) | - | 4452969..4453955 (+) | 987 | WP_000784004.1 | TRAP transporter substrate-binding protein | - |
Sequence
Protein
Download Length: 326 a.a. Molecular weight: 35893.04 Da Isoelectric Point: 5.5860
>NTDB_id=495630 KIM04_RS22445 WP_001055633.1 4448356..4449336(-) (pilT) [Escherichia coli strain 07_3337]
MNMEEIVALSVKHNVSDLHLCSAWSARWRIRGLMEAAPFDAPDVEELLREWLDDDQRAILLENGQLDFAVSLAENQRLRG
SAFAQRQGISLALRLLPSHCPQLEQLGAPTVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVE
YIYASQRCLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDS
FPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVGMLTFQQSYQQR
VGEGRL
MNMEEIVALSVKHNVSDLHLCSAWSARWRIRGLMEAAPFDAPDVEELLREWLDDDQRAILLENGQLDFAVSLAENQRLRG
SAFAQRQGISLALRLLPSHCPQLEQLGAPTVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVE
YIYASQRCLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDS
FPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVGMLTFQQSYQQR
VGEGRL
Nucleotide
Download Length: 981 bp
>NTDB_id=495630 KIM04_RS22445 WP_001055633.1 4448356..4449336(-) (pilT) [Escherichia coli strain 07_3337]
ATGAATATGGAAGAAATTGTGGCCCTTAGTGTAAAGCATAACGTCTCGGATCTACACCTGTGCAGCGCCTGGTCCGCACG
ATGGCGCATTCGCGGGCTAATGGAAGCTGCGCCGTTTGATGCGCCGGACGTCGAAGAGCTACTGCGGGAGTGGCTGGATG
ACGATCAGCGGGCAATATTGCTGGAAAATGGCCAGCTGGATTTTGCCGTGTCGCTGGCGGAAAACCAGCGGTTGCGTGGC
AGTGCGTTCGCGCAACGGCAAGGTATTTCTCTGGCATTACGGTTGTTACCTTCGCACTGTCCACAGCTCGAACAGCTTGG
CGCACCAACGGTATTGCCGGAATTACTCAAGAGCGAGAATGGCCTGATTCTGGTGACGGGGGCGACGGGGAGCGGCAAAT
CTACCACGCTGGCGGCGATGGTTGGCTATCTCAATCAACATGCCGATGCGCATATTCTGACGCTGGAAGATCCTGTTGAA
TATATCTATGCCAGCCAGCGATGTTTGATCCAGCAGCGGGAAATTGGTTTGCACTGTATGACGTTCGCATCGGGATTGCG
GGCCGCATTGCGGGAAGATCCTGATGTGATTTTGCTCGGAGAGCTGCGTGACAGCGAGACAATCCGTCTGGCACTGACGG
CGGCAGAAACCGGGCATTTGGTGCTGGCAACATTACATACGCGTGGTGCCGCGCAGGCAGTTGAGCGACTGGTGGATTCA
TTTCCGGCGCAGGAAAAAGATCCCGTACGTAATCAACTGGCAGGTAGTTTACGGGCCGTGTTGTCACAAAAGCTGGAAGT
GGATAAACAGGAAGGACGCGTGGCGCTGTTTGAATTATTGATTAACACTCCCGCGGTGGGGAATTTGATTCGCGAAGGGA
AAACCCACCAGTTACCGCATGTTATTCAAACCGGGCAGCAGGTGGGGATGTTAACGTTTCAGCAGAGTTATCAGCAGCGG
GTGGGGGAAGGGCGTTTGTGA
ATGAATATGGAAGAAATTGTGGCCCTTAGTGTAAAGCATAACGTCTCGGATCTACACCTGTGCAGCGCCTGGTCCGCACG
ATGGCGCATTCGCGGGCTAATGGAAGCTGCGCCGTTTGATGCGCCGGACGTCGAAGAGCTACTGCGGGAGTGGCTGGATG
ACGATCAGCGGGCAATATTGCTGGAAAATGGCCAGCTGGATTTTGCCGTGTCGCTGGCGGAAAACCAGCGGTTGCGTGGC
AGTGCGTTCGCGCAACGGCAAGGTATTTCTCTGGCATTACGGTTGTTACCTTCGCACTGTCCACAGCTCGAACAGCTTGG
CGCACCAACGGTATTGCCGGAATTACTCAAGAGCGAGAATGGCCTGATTCTGGTGACGGGGGCGACGGGGAGCGGCAAAT
CTACCACGCTGGCGGCGATGGTTGGCTATCTCAATCAACATGCCGATGCGCATATTCTGACGCTGGAAGATCCTGTTGAA
TATATCTATGCCAGCCAGCGATGTTTGATCCAGCAGCGGGAAATTGGTTTGCACTGTATGACGTTCGCATCGGGATTGCG
GGCCGCATTGCGGGAAGATCCTGATGTGATTTTGCTCGGAGAGCTGCGTGACAGCGAGACAATCCGTCTGGCACTGACGG
CGGCAGAAACCGGGCATTTGGTGCTGGCAACATTACATACGCGTGGTGCCGCGCAGGCAGTTGAGCGACTGGTGGATTCA
TTTCCGGCGCAGGAAAAAGATCCCGTACGTAATCAACTGGCAGGTAGTTTACGGGCCGTGTTGTCACAAAAGCTGGAAGT
GGATAAACAGGAAGGACGCGTGGCGCTGTTTGAATTATTGATTAACACTCCCGCGGTGGGGAATTTGATTCGCGAAGGGA
AAACCCACCAGTTACCGCATGTTATTCAAACCGGGCAGCAGGTGGGGATGTTAACGTTTCAGCAGAGTTATCAGCAGCGG
GTGGGGGAAGGGCGTTTGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.