Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | KIM21_RS24030 | Genome accession | NZ_CP074866 |
| Coordinates | 4671971..4672951 (-) | Length | 326 a.a. |
| NCBI ID | WP_001055633.1 | Uniprot ID | - |
| Organism | Escherichia coli strain 2013C_3653 | ||
| Function | power the assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 4666971..4677951
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KIM21_RS24000 (KIM21_23705) | yggI | 4667634..4668131 (+) | 498 | WP_000858396.1 | SprT family zinc-dependent metalloprotease | - |
| KIM21_RS24005 (KIM21_23710) | endA | 4668226..4668933 (+) | 708 | WP_000286500.1 | deoxyribonuclease I | - |
| KIM21_RS24010 (KIM21_23715) | rsmE | 4669013..4669744 (+) | 732 | WP_001222508.1 | 16S rRNA (uracil(1498)-N(3))-methyltransferase | - |
| KIM21_RS24015 (KIM21_23720) | gshB | 4669757..4670707 (+) | 951 | WP_032345038.1 | glutathione synthase | - |
| KIM21_RS24020 (KIM21_23725) | yqgE | 4670816..4671379 (+) | 564 | WP_001053178.1 | YqgE/AlgH family protein | - |
| KIM21_RS24025 (KIM21_23730) | ruvX | 4671379..4671795 (+) | 417 | WP_000017111.1 | Holliday junction resolvase RuvX | - |
| KIM21_RS24030 (KIM21_23735) | pilT | 4671971..4672951 (-) | 981 | WP_001055633.1 | PilT/PilU family type 4a pilus ATPase | Machinery gene |
| KIM21_RS24035 (KIM21_23740) | yggS | 4672969..4673673 (+) | 705 | WP_000997795.1 | pyridoxal phosphate homeostasis protein | - |
| KIM21_RS24040 (KIM21_23745) | yggT | 4673691..4674257 (+) | 567 | WP_001094831.1 | osmotic shock tolerance protein YggT | - |
| KIM21_RS24045 (KIM21_23750) | yggU | 4674254..4674544 (+) | 291 | WP_001277222.1 | DUF167 family protein YggU | - |
| KIM21_RS24050 (KIM21_23755) | rdgB | 4674552..4675145 (+) | 594 | WP_001174742.1 | XTP/dITP diphosphatase | - |
| KIM21_RS24055 (KIM21_23760) | hemW | 4675138..4676274 (+) | 1137 | WP_000239919.1 | radical SAM family heme chaperone HemW | - |
| KIM21_RS24060 (KIM21_23765) | - | 4676586..4677572 (+) | 987 | WP_000784004.1 | TRAP transporter substrate-binding protein | - |
Sequence
Protein
Download Length: 326 a.a. Molecular weight: 35893.04 Da Isoelectric Point: 5.5860
>NTDB_id=494196 KIM21_RS24030 WP_001055633.1 4671971..4672951(-) (pilT) [Escherichia coli strain 2013C_3653]
MNMEEIVALSVKHNVSDLHLCSAWSARWRIRGLMEAAPFDAPDVEELLREWLDDDQRAILLENGQLDFAVSLAENQRLRG
SAFAQRQGISLALRLLPSHCPQLEQLGAPTVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVE
YIYASQRCLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDS
FPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVGMLTFQQSYQQR
VGEGRL
MNMEEIVALSVKHNVSDLHLCSAWSARWRIRGLMEAAPFDAPDVEELLREWLDDDQRAILLENGQLDFAVSLAENQRLRG
SAFAQRQGISLALRLLPSHCPQLEQLGAPTVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVE
YIYASQRCLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDS
FPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVGMLTFQQSYQQR
VGEGRL
Nucleotide
Download Length: 981 bp
>NTDB_id=494196 KIM21_RS24030 WP_001055633.1 4671971..4672951(-) (pilT) [Escherichia coli strain 2013C_3653]
ATGAATATGGAAGAAATTGTGGCCCTTAGTGTAAAGCATAACGTCTCGGATCTACACCTGTGCAGCGCCTGGTCCGCACG
ATGGCGCATTCGCGGGCTAATGGAAGCTGCGCCGTTTGATGCGCCGGACGTCGAAGAGCTACTGCGGGAGTGGCTGGATG
ACGATCAGCGGGCAATATTGCTGGAAAATGGCCAGCTGGATTTTGCCGTGTCGCTGGCGGAAAACCAGCGGTTGCGTGGC
AGTGCGTTCGCGCAACGGCAAGGTATTTCTCTGGCATTACGGTTGTTACCTTCGCACTGTCCACAGCTCGAACAGCTTGG
CGCACCAACGGTATTGCCGGAATTACTCAAGAGCGAGAATGGCCTGATTCTGGTGACGGGGGCGACGGGGAGCGGCAAAT
CTACCACGCTGGCGGCGATGGTTGGCTATCTCAATCAACATGCCGATGCGCATATTCTGACGCTGGAAGATCCTGTTGAA
TATATCTATGCCAGCCAGCGATGTTTGATCCAGCAGCGGGAAATTGGTTTGCACTGTATGACGTTCGCATCGGGATTGCG
GGCCGCATTGCGGGAAGATCCTGATGTGATTTTGCTCGGAGAGCTGCGTGACAGCGAGACAATCCGTCTGGCACTGACGG
CGGCAGAAACCGGGCATTTGGTGCTGGCAACATTACATACGCGTGGTGCCGCGCAGGCAGTTGAGCGACTGGTGGATTCA
TTTCCGGCGCAGGAAAAAGATCCCGTACGTAATCAACTGGCAGGTAGTTTACGGGCCGTGTTGTCACAAAAGCTGGAAGT
GGATAAACAGGAAGGACGCGTGGCGCTGTTTGAATTATTGATTAACACTCCCGCGGTGGGGAATTTGATTCGCGAAGGGA
AAACCCACCAGTTACCGCATGTTATTCAAACCGGGCAGCAGGTGGGGATGTTAACGTTTCAGCAGAGTTATCAGCAGCGG
GTGGGGGAAGGGCGTTTGTGA
ATGAATATGGAAGAAATTGTGGCCCTTAGTGTAAAGCATAACGTCTCGGATCTACACCTGTGCAGCGCCTGGTCCGCACG
ATGGCGCATTCGCGGGCTAATGGAAGCTGCGCCGTTTGATGCGCCGGACGTCGAAGAGCTACTGCGGGAGTGGCTGGATG
ACGATCAGCGGGCAATATTGCTGGAAAATGGCCAGCTGGATTTTGCCGTGTCGCTGGCGGAAAACCAGCGGTTGCGTGGC
AGTGCGTTCGCGCAACGGCAAGGTATTTCTCTGGCATTACGGTTGTTACCTTCGCACTGTCCACAGCTCGAACAGCTTGG
CGCACCAACGGTATTGCCGGAATTACTCAAGAGCGAGAATGGCCTGATTCTGGTGACGGGGGCGACGGGGAGCGGCAAAT
CTACCACGCTGGCGGCGATGGTTGGCTATCTCAATCAACATGCCGATGCGCATATTCTGACGCTGGAAGATCCTGTTGAA
TATATCTATGCCAGCCAGCGATGTTTGATCCAGCAGCGGGAAATTGGTTTGCACTGTATGACGTTCGCATCGGGATTGCG
GGCCGCATTGCGGGAAGATCCTGATGTGATTTTGCTCGGAGAGCTGCGTGACAGCGAGACAATCCGTCTGGCACTGACGG
CGGCAGAAACCGGGCATTTGGTGCTGGCAACATTACATACGCGTGGTGCCGCGCAGGCAGTTGAGCGACTGGTGGATTCA
TTTCCGGCGCAGGAAAAAGATCCCGTACGTAATCAACTGGCAGGTAGTTTACGGGCCGTGTTGTCACAAAAGCTGGAAGT
GGATAAACAGGAAGGACGCGTGGCGCTGTTTGAATTATTGATTAACACTCCCGCGGTGGGGAATTTGATTCGCGAAGGGA
AAACCCACCAGTTACCGCATGTTATTCAAACCGGGCAGCAGGTGGGGATGTTAACGTTTCAGCAGAGTTATCAGCAGCGG
GTGGGGGAAGGGCGTTTGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.