Detailed information NTG0493482

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: IMZ18_RS12300
• Genome accession: NZ_CP063151
• Coordinates: 2268766..2269719 (-)
• Length: 317 a.a.
• NCBI ID: WP_014479436.1
• Uniprot ID: -
• Organism: Bacillus subtilis subsp. subtilis strain CMIN-4
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 2263766..2274719

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IMZ18_RS12270 (IMZ18_12270)	appD	2263897..2264883 (-)	987	WP_003232965.1	oligopeptide ABC transporter ATP-binding protein AppD	-
IMZ18_RS12275 (IMZ18_12275)	yjaZ	2265075..2265860 (-)	786	WP_014479439.1	DUF2268 domain-containing protein	-
IMZ18_RS12280 (IMZ18_12280)	fabF	2265936..2267177 (-)	1242	WP_014479438.1	beta-ketoacyl-ACP synthase II	-
IMZ18_RS12285 (IMZ18_12285)	fabH	2267200..2268138 (-)	939	WP_003232971.1	beta-ketoacyl-ACP synthase III	-
IMZ18_RS12290 (IMZ18_12290)	yjzB	2268303..2268530 (+)	228	WP_031600361.1	spore coat protein YjzB	-
IMZ18_RS12295 (IMZ18_12295)	comZ	2268560..2268751 (-)	192	WP_003224559.1	ComG operon transcriptional repressor ComZ	Regulator
IMZ18_RS12300 (IMZ18_12300)	med	2268766..2269719 (-)	954	WP_014479436.1	transcriptional regulator Med	Regulator
IMZ18_RS12305 (IMZ18_12305)	-	2269810..2270367 (-)	558	WP_014479435.1	hypothetical protein	-
IMZ18_RS12310 (IMZ18_12310)	-	2270449..2271183 (-)	735	WP_014479433.1	hypothetical protein	-
IMZ18_RS12315 (IMZ18_12315)	yjzD	2271432..2271617 (+)	186	WP_003245236.1	DUF2929 domain-containing protein	-
IMZ18_RS12320 (IMZ18_12320)	yjzC	2271663..2271842 (-)	180	WP_003245356.1	YjzC family protein	-
IMZ18_RS12325 (IMZ18_12325)	-	2272020..2273170 (+)	1151	WP_087614160.1	IS3 family transposase	-
IMZ18_RS12330 (IMZ18_12330)	argF	2273218..2274177 (-)	960	WP_014479432.1	ornithine carbamoyltransferase	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35310.88 Da
• Isoelectric Point: 4.6652

>NTDB_id=493482 IMZ18_RS12300 WP_014479436.1 2268766..2269719(-) (med) [Bacillus subtilis subsp. subtilis strain CMIN-4]
MITRLVMIFSVLLLLSGCGKTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTEEDIINAIED
FHKRGVNLLYGHGSEYAEVFNLVGEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHMSKTNQVGVIASFTWQ
PEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLNTGVVEMGTFSPLVDKDFQQRIAKLIKTYNKTGELPKNE

Nucleotide

• Length: 954 bp

>NTDB_id=493482 IMZ18_RS12300 WP_014479436.1 2268766..2269719(-) (med) [Bacillus subtilis subsp. subtilis strain CMIN-4]
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGTGGATGTGGAAAAACTCCGTTCAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGCACAAAAGGGTATAAAGGATTACTGAATA
TACAATCCAAATACAATGTGGACGTCTATTATAAAGAAGGCGTTAAAACAGAAGAAGATATCATAAATGCGATTGAGGAT
TTTCATAAGAGGGGCGTCAATCTGCTCTACGGCCATGGGAGTGAATATGCTGAGGTGTTTAACTTGGTCGGCGAAGATTA
TCCAGATATGGAATTCGTCATTTCCAATGCGAAAGCGAAAGCTGATAATGTAACGAGTGTCCATTTTAGCGGGGAAGCAA
TGGGCTTTTTTGGAGGAATGACTGCTGCCCATATGTCGAAAACGAATCAGGTCGGTGTAATTGCTTCCTTTACGTGGCAG
CCTGAGGTGGACGGTTTTATCAAAGGGGCCAAGTATGAAAATCCGGATATAGAGGTAAATACGAAATATACGGATCATTG
GGATGATGATACAACAGCAGTAAAGCTTTATCAGAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCCGCCGGAGACG
GGTATAATGTCCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATTGGCTACGTCACAGATCAATCGGATCTG
GGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGG
CACCCTTGAGGGCGGCGATCATTACTACGACCTGAATACGGGAGTCGTTGAGATGGGAACATTCAGCCCGCTCGTCGACA
AAGACTTTCAGCAAAGAATCGCCAAGCTGATCAAAACATACAACAAAACAGGCGAGCTGCCAAAAAACGAGTAA

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (27-317)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	99.369	100	0.994