Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | C2745_RS04555 | Genome accession | NZ_CP061315 |
| Coordinates | 862054..863055 (+) | Length | 333 a.a. |
| NCBI ID | WP_215385401.1 | Uniprot ID | - |
| Organism | Polynucleobacter sp. AP-Kolm-20A-A1 | ||
| Function | mediate the depolymerization of the type IV pilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 857054..868055
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C2745_RS04530 (C2745_04530) | - | 857363..859369 (-) | 2007 | WP_215385391.1 | ATP-binding protein | - |
| C2745_RS04535 (C2745_04535) | - | 859463..859924 (+) | 462 | WP_215385393.1 | DUF4124 domain-containing protein | - |
| C2745_RS04540 (C2745_04540) | - | 860093..860620 (+) | 528 | WP_215385395.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | - |
| C2745_RS04545 (C2745_04545) | - | 860661..861113 (+) | 453 | WP_215385397.1 | type II secretion system protein | - |
| C2745_RS04550 (C2745_04550) | - | 861124..861888 (+) | 765 | WP_215385399.1 | A24 family peptidase | - |
| C2745_RS04555 (C2745_04555) | pilT | 862054..863055 (+) | 1002 | WP_215385401.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| C2745_RS04560 (C2745_04560) | - | 863052..863621 (+) | 570 | WP_215385403.1 | Tfp pilus assembly protein FimT/FimU | - |
| C2745_RS04565 (C2745_04565) | - | 863618..864106 (+) | 489 | WP_215385404.1 | type II secretion system protein | - |
| C2745_RS04570 (C2745_04570) | - | 864103..864768 (+) | 666 | WP_215385406.1 | PilW family protein | - |
| C2745_RS04575 (C2745_04575) | - | 864749..865351 (+) | 603 | WP_215385408.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 333 a.a. Molecular weight: 37256.60 Da Isoelectric Point: 6.1795
>NTDB_id=481770 C2745_RS04555 WP_215385401.1 862054..863055(+) (pilT) [Polynucleobacter sp. AP-Kolm-20A-A1]
MEIIDKALHYVAHHKLSDIHLHVNEPVAIRVDGDIQTFEDDIVTQLDFDQFIKNWLTQEQRIKFMESFDADLAVESGEYR
FRVNLFKTSRGLAAVMRKIETQIPSFDSLGLPAVARDVIEQENGLILVTGPTGSGKSTTLAAMIDRINRHRPGHIITIED
PIEFVHQNQKSVISQREVARDTLSFSSALRASLREDPDVILVGELRDLETIQLALTAAETGHLVFGTLHTSGAPNTINRI
IDVFPSQQQDQVRAQLSQSLRLVMTQRLLRRKGGVGRVGAFEVMTCNPAVRNLIRENKVFQIPSVMQMARGEGMITMDAS
LQQLAQTGQIESI
MEIIDKALHYVAHHKLSDIHLHVNEPVAIRVDGDIQTFEDDIVTQLDFDQFIKNWLTQEQRIKFMESFDADLAVESGEYR
FRVNLFKTSRGLAAVMRKIETQIPSFDSLGLPAVARDVIEQENGLILVTGPTGSGKSTTLAAMIDRINRHRPGHIITIED
PIEFVHQNQKSVISQREVARDTLSFSSALRASLREDPDVILVGELRDLETIQLALTAAETGHLVFGTLHTSGAPNTINRI
IDVFPSQQQDQVRAQLSQSLRLVMTQRLLRRKGGVGRVGAFEVMTCNPAVRNLIRENKVFQIPSVMQMARGEGMITMDAS
LQQLAQTGQIESI
Nucleotide
Download Length: 1002 bp
>NTDB_id=481770 C2745_RS04555 WP_215385401.1 862054..863055(+) (pilT) [Polynucleobacter sp. AP-Kolm-20A-A1]
ATGGAAATCATCGATAAAGCTCTTCATTACGTTGCGCACCATAAGCTTTCGGACATTCATTTACATGTTAATGAGCCGGT
GGCAATTAGGGTTGATGGTGATATTCAAACTTTTGAAGATGACATCGTTACCCAGTTAGATTTTGATCAATTCATTAAGA
ATTGGTTAACTCAAGAGCAGCGTATCAAGTTTATGGAGTCATTTGATGCCGACTTGGCAGTTGAATCTGGCGAGTATCGC
TTTAGGGTTAACTTATTTAAAACCTCTCGCGGCTTGGCTGCGGTGATGAGAAAAATTGAAACTCAAATTCCAAGTTTTGA
TTCTTTGGGCCTGCCTGCTGTTGCTAGGGATGTCATTGAGCAAGAGAATGGATTGATTTTGGTTACCGGCCCCACTGGAT
CTGGTAAGTCAACTACGTTGGCGGCAATGATTGATCGCATCAATCGTCATCGGCCTGGGCACATCATCACCATTGAAGAT
CCAATTGAATTTGTTCACCAGAACCAAAAAAGCGTTATTTCTCAAAGAGAGGTAGCACGCGATACCTTGTCATTCTCATC
GGCTTTACGTGCCTCGTTACGTGAGGATCCCGATGTCATCTTAGTTGGCGAGTTGCGAGACCTAGAAACCATTCAATTGG
CTTTAACTGCGGCCGAGACTGGCCATTTGGTTTTTGGAACACTTCATACCAGCGGAGCTCCAAATACTATTAATAGGATT
ATTGACGTCTTCCCATCACAGCAGCAGGATCAGGTGAGGGCGCAATTATCTCAATCTCTACGTTTGGTAATGACGCAACG
TTTATTGAGGCGTAAGGGCGGAGTAGGCCGTGTGGGTGCCTTTGAGGTAATGACATGCAACCCAGCAGTTCGTAACTTGA
TTCGAGAAAACAAAGTCTTCCAAATACCAAGTGTGATGCAAATGGCGCGTGGTGAAGGAATGATCACCATGGATGCTTCA
CTGCAACAGCTTGCTCAGACGGGGCAAATAGAATCTATATGA
ATGGAAATCATCGATAAAGCTCTTCATTACGTTGCGCACCATAAGCTTTCGGACATTCATTTACATGTTAATGAGCCGGT
GGCAATTAGGGTTGATGGTGATATTCAAACTTTTGAAGATGACATCGTTACCCAGTTAGATTTTGATCAATTCATTAAGA
ATTGGTTAACTCAAGAGCAGCGTATCAAGTTTATGGAGTCATTTGATGCCGACTTGGCAGTTGAATCTGGCGAGTATCGC
TTTAGGGTTAACTTATTTAAAACCTCTCGCGGCTTGGCTGCGGTGATGAGAAAAATTGAAACTCAAATTCCAAGTTTTGA
TTCTTTGGGCCTGCCTGCTGTTGCTAGGGATGTCATTGAGCAAGAGAATGGATTGATTTTGGTTACCGGCCCCACTGGAT
CTGGTAAGTCAACTACGTTGGCGGCAATGATTGATCGCATCAATCGTCATCGGCCTGGGCACATCATCACCATTGAAGAT
CCAATTGAATTTGTTCACCAGAACCAAAAAAGCGTTATTTCTCAAAGAGAGGTAGCACGCGATACCTTGTCATTCTCATC
GGCTTTACGTGCCTCGTTACGTGAGGATCCCGATGTCATCTTAGTTGGCGAGTTGCGAGACCTAGAAACCATTCAATTGG
CTTTAACTGCGGCCGAGACTGGCCATTTGGTTTTTGGAACACTTCATACCAGCGGAGCTCCAAATACTATTAATAGGATT
ATTGACGTCTTCCCATCACAGCAGCAGGATCAGGTGAGGGCGCAATTATCTCAATCTCTACGTTTGGTAATGACGCAACG
TTTATTGAGGCGTAAGGGCGGAGTAGGCCGTGTGGGTGCCTTTGAGGTAATGACATGCAACCCAGCAGTTCGTAACTTGA
TTCGAGAAAACAAAGTCTTCCAAATACCAAGTGTGATGCAAATGGCGCGTGGTGAAGGAATGATCACCATGGATGCTTCA
CTGCAACAGCTTGCTCAGACGGGGCAAATAGAATCTATATGA
3D structure
| Source | ID | Structure |
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Similar proteins
Only experimentally validated proteins are listed.