Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | PSBA01_RS04455 | Genome accession | NZ_CP060390 |
| Coordinates | 1051303..1052358 (+) | Length | 351 a.a. |
| NCBI ID | WP_058024233.1 | Uniprot ID | A0A0T6DST7 |
| Organism | Psychrobacter sp. KCTC 72983 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1046303..1057358
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PSBA01_RS04440 | - | 1046642..1048333 (+) | 1692 | WP_071002366.1 | NAD+ synthase | - |
| PSBA01_RS04445 | - | 1048834..1050108 (+) | 1275 | WP_186475165.1 | hemolysin family protein | - |
| PSBA01_RS04450 | - | 1050209..1050937 (-) | 729 | WP_186475437.1 | YggS family pyridoxal phosphate-dependent enzyme | - |
| PSBA01_RS04455 | pilT | 1051303..1052358 (+) | 1056 | WP_058024233.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| PSBA01_RS04460 | pilU | 1052478..1053599 (+) | 1122 | WP_071002369.1 | PilT/PilU family type 4a pilus ATPase | Machinery gene |
| PSBA01_RS04465 | fur | 1053736..1054170 (-) | 435 | WP_058024231.1 | ferric iron uptake transcriptional regulator | - |
| PSBA01_RS04470 | - | 1054498..1054917 (+) | 420 | WP_058024230.1 | outer membrane protein assembly factor BamE | - |
| PSBA01_RS04475 | - | 1054968..1055345 (-) | 378 | WP_228724635.1 | RnfH family protein | - |
| PSBA01_RS04480 | - | 1055321..1056451 (-) | 1131 | WP_186475166.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 351 a.a. Molecular weight: 39034.91 Da Isoelectric Point: 6.8442
>NTDB_id=475612 PSBA01_RS04455 WP_058024233.1 1051303..1052358(+) (pilT) [Psychrobacter sp. KCTC 72983]
MAEKNTLSIEDLLRFTVKHKASDLHISAGMPAMIRTDGEMTRINMPAMTHQVVHQLIYDIMNDKQRADFEEFFETDFSFE
IPNLARFRVNAFNQNRGAGAVFRTIPSKVLTMEDLGMGDVFKRVSDFKRGVVLVTGPTGSGKSTTLAAMIDYINESRKEH
ILTIEDPIEFVHESKKSLINQREVHRDTLGFEPALRSALREDPDVILVGELRDLETIRLALTAAETGHLVFGTLHTSSAA
KTIDRVIDVFPAAEKDMIRAMLSESLQAVISQTLLRRQAGGRVAAHEIMLGTPAIRNLIRENKIAQMYSAIQTGAGEGMI
TLDQTLKNLVGKGTISKDVARPYAKQPEAFL
MAEKNTLSIEDLLRFTVKHKASDLHISAGMPAMIRTDGEMTRINMPAMTHQVVHQLIYDIMNDKQRADFEEFFETDFSFE
IPNLARFRVNAFNQNRGAGAVFRTIPSKVLTMEDLGMGDVFKRVSDFKRGVVLVTGPTGSGKSTTLAAMIDYINESRKEH
ILTIEDPIEFVHESKKSLINQREVHRDTLGFEPALRSALREDPDVILVGELRDLETIRLALTAAETGHLVFGTLHTSSAA
KTIDRVIDVFPAAEKDMIRAMLSESLQAVISQTLLRRQAGGRVAAHEIMLGTPAIRNLIRENKIAQMYSAIQTGAGEGMI
TLDQTLKNLVGKGTISKDVARPYAKQPEAFL
Nucleotide
Download Length: 1056 bp
>NTDB_id=475612 PSBA01_RS04455 WP_058024233.1 1051303..1052358(+) (pilT) [Psychrobacter sp. KCTC 72983]
ATGGCTGAAAAAAACACCTTAAGTATCGAAGACTTGCTACGTTTTACGGTCAAACATAAAGCATCGGATTTACATATTTC
AGCTGGCATGCCTGCGATGATTCGTACCGATGGTGAGATGACACGCATCAATATGCCTGCGATGACGCACCAAGTGGTTC
ATCAGCTCATTTATGACATTATGAACGACAAGCAGCGCGCTGATTTTGAAGAGTTCTTTGAGACAGATTTTTCTTTTGAG
ATTCCAAATTTGGCACGTTTTCGAGTCAATGCATTCAATCAAAATCGCGGCGCAGGCGCGGTATTTCGTACCATCCCTTC
TAAAGTATTGACCATGGAAGACTTAGGGATGGGCGACGTGTTCAAACGTGTCTCAGACTTCAAACGTGGCGTGGTGTTAG
TTACCGGCCCAACTGGTTCGGGTAAATCGACGACGCTAGCGGCCATGATTGATTATATTAACGAAAGTCGTAAAGAGCAT
ATTTTAACAATTGAAGATCCGATTGAATTTGTCCATGAATCGAAAAAAAGCCTGATTAACCAGCGTGAAGTGCACCGCGA
TACCTTAGGTTTTGAGCCTGCATTACGTTCAGCATTGCGAGAAGATCCAGATGTCATCTTGGTTGGTGAGTTACGTGACC
TTGAGACCATTCGTTTGGCACTGACTGCGGCCGAAACAGGACATTTAGTATTCGGCACTCTGCATACTAGCTCAGCCGCT
AAGACGATTGACCGTGTCATCGACGTATTCCCTGCCGCCGAAAAAGATATGATTCGTGCCATGCTATCGGAGTCACTACA
AGCCGTTATTTCACAAACCCTATTGCGTCGTCAAGCTGGTGGACGTGTGGCAGCTCATGAAATCATGCTAGGCACACCCG
CTATCCGTAACTTAATACGTGAAAACAAAATTGCTCAGATGTACTCTGCCATCCAAACGGGTGCAGGCGAAGGCATGATT
ACACTCGATCAAACGCTAAAAAACTTGGTTGGCAAAGGCACTATCAGTAAAGATGTGGCTCGTCCTTATGCCAAGCAACC
TGAGGCATTTTTATAG
ATGGCTGAAAAAAACACCTTAAGTATCGAAGACTTGCTACGTTTTACGGTCAAACATAAAGCATCGGATTTACATATTTC
AGCTGGCATGCCTGCGATGATTCGTACCGATGGTGAGATGACACGCATCAATATGCCTGCGATGACGCACCAAGTGGTTC
ATCAGCTCATTTATGACATTATGAACGACAAGCAGCGCGCTGATTTTGAAGAGTTCTTTGAGACAGATTTTTCTTTTGAG
ATTCCAAATTTGGCACGTTTTCGAGTCAATGCATTCAATCAAAATCGCGGCGCAGGCGCGGTATTTCGTACCATCCCTTC
TAAAGTATTGACCATGGAAGACTTAGGGATGGGCGACGTGTTCAAACGTGTCTCAGACTTCAAACGTGGCGTGGTGTTAG
TTACCGGCCCAACTGGTTCGGGTAAATCGACGACGCTAGCGGCCATGATTGATTATATTAACGAAAGTCGTAAAGAGCAT
ATTTTAACAATTGAAGATCCGATTGAATTTGTCCATGAATCGAAAAAAAGCCTGATTAACCAGCGTGAAGTGCACCGCGA
TACCTTAGGTTTTGAGCCTGCATTACGTTCAGCATTGCGAGAAGATCCAGATGTCATCTTGGTTGGTGAGTTACGTGACC
TTGAGACCATTCGTTTGGCACTGACTGCGGCCGAAACAGGACATTTAGTATTCGGCACTCTGCATACTAGCTCAGCCGCT
AAGACGATTGACCGTGTCATCGACGTATTCCCTGCCGCCGAAAAAGATATGATTCGTGCCATGCTATCGGAGTCACTACA
AGCCGTTATTTCACAAACCCTATTGCGTCGTCAAGCTGGTGGACGTGTGGCAGCTCATGAAATCATGCTAGGCACACCCG
CTATCCGTAACTTAATACGTGAAAACAAAATTGCTCAGATGTACTCTGCCATCCAAACGGGTGCAGGCGAAGGCATGATT
ACACTCGATCAAACGCTAAAAAACTTGGTTGGCAAAGGCACTATCAGTAAAGATGTGGCTCGTCCTTATGCCAAGCAACC
TGAGGCATTTTTATAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Acinetobacter nosocomialis M2 |
79.42 |
98.291 |
0.781 |
| pilT | Acinetobacter baumannii D1279779 |
79.42 |
98.291 |
0.781 |
| pilT | Acinetobacter baumannii strain A118 |
79.42 |
98.291 |
0.781 |
| pilT | Pseudomonas aeruginosa PAK |
77.616 |
98.006 |
0.761 |
| pilT | Pseudomonas stutzeri DSM 10701 |
77.326 |
98.006 |
0.758 |
| pilT | Acinetobacter baylyi ADP1 |
76.453 |
98.006 |
0.749 |
| pilT | Legionella pneumophila strain Lp02 |
71.802 |
98.006 |
0.704 |
| pilT | Legionella pneumophila strain ERS1305867 |
71.802 |
98.006 |
0.704 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
67.781 |
93.732 |
0.635 |
| pilT | Vibrio cholerae strain A1552 |
67.781 |
93.732 |
0.635 |
| pilT | Neisseria meningitidis 8013 |
64.058 |
98.291 |
0.63 |
| pilT | Neisseria gonorrhoeae MS11 |
63.478 |
98.291 |
0.624 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
51.014 |
98.291 |
0.501 |
| pilU | Acinetobacter baylyi ADP1 |
41.691 |
97.721 |
0.407 |
| pilU | Pseudomonas stutzeri DSM 10701 |
40.708 |
96.581 |
0.393 |
| pilU | Vibrio cholerae strain A1552 |
42.724 |
92.023 |
0.393 |